| Gene Symbol | daf-19 |
| Entrez Gene ID | 174577 |
| Full Name | RFX-like transcription factor daf-19 |
| Gene Type | protein-coding |
| Organism | Caenorhabditis elegans |
ORF » Species Summary » Caenorhabditis elegans » daf-19 cDNA ORF clone
| Gene Symbol | daf-19 |
| Entrez Gene ID | 174577 |
| Full Name | RFX-like transcription factor daf-19 |
| Gene Type | protein-coding |
| Organism | Caenorhabditis elegans |
| mRNA | Protein | Name |
|---|---|---|
| NM_001267308.2 | NP_001254237.1 | RFX-type winged-helix domain-containing protein |
| NM_001267308.1 | NP_001254237.1 | hypothetical protein |
| NM_001026969.3 | NP_001022140.1 | RFX-like transcription factor daf-19 |
| NM_001306556.1 | NP_001293485.1 | RFX-like transcription factor daf-19 |
| NM_001026968.4 | NP_001022139.1 | RFX-like transcription factor daf-19 |
| NM_001267307.1 | NP_001254236.1 | hypothetical protein |
| NM_001267307.2 | NP_001254236.1 | RFX-type winged-helix domain-containing protein |
| NM_001026969.4 | NP_001022140.1 | RFX-like transcription factor daf-19 |
| NM_001306556.2 | NP_001293485.1 | RFX-type winged-helix domain-containing protein |
| NM_001026968.3 | NP_001022139.1 | RFX-like transcription factor daf-19 |
| Caenorhabditis elegans (roundworm) | daf-19 | NP_001254236.1 |
| Pan troglodytes (chimpanzee) | RFX3 | XP_520464.2 |
| Homo sapiens (human) | RFX3 | NP_001269045.1 |
| RFX3 | XP_001086729.2 | |
| Anopheles gambiae (African malaria mosquito) | AgaP_AGAP003943 | XP_318401.5 |
| Canis lupus familiaris (dog) | RFX3 | XP_005615977.1 |
| Mus musculus (house mouse) | Rfx3 | NP_001159886.1 |
| Gallus gallus (chicken) | RFX3 | XP_004949116.1 |
| Danio rerio (zebrafish) | rfx3 | NP_001073517.1 |
| Bos taurus (cattle) | LOC538070 | XP_005210053.1 |
| Drosophila melanogaster (fruit fly) | Rfx | NP_001247022.2 |
| Xenopus tropicalis (tropical clawed frog) | rfx3 | NP_001263620.1 |
Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Aberrant splicing of daf-19c to upstream cryptic sites results in in-frame and functional products.
Title: A splice acceptor mutation in C. elegans daf-19/Rfx disrupts functional specialization of male-specific ciliated neurons but does not affect ciliogenesis.
Our results suggest that pathogenic cues trigger a common core-signaling pathway via tissue-specific mechanisms and demonstrate a novel role for RFX factors in neuronal and innate immune responses to infection
Title: RFX transcription factor DAF-19 regulates 5-HT and innate immune responses to pathogenic bacteria in Caenorhabditis elegans.
Data suggest that an enhancer element appears to co-regulate ciliary genes in a DAF-19 dependent manner.
Title: The in vivo dissection of direct RFX-target gene promoters in C. elegans reveals a novel cis-regulatory element, the C-box.
Transcriptional profiling of C. elegans DAF-19 uncovers a ciliary base-associated protein and a CDK/CCRK/LF2p-related kinase required for intraflagellar transport.
Title: Transcriptional profiling of C. elegans DAF-19 uncovers a ciliary base-associated protein and a CDK/CCRK/LF2p-related kinase required for intraflagellar transport.
the RFX TF DAF-19 regulates ciliogenesis via X-box containing ciliogenic genes and controls ciliary specialization by regulating non-X-box containing sensory genes
Title: Functional specialization of sensory cilia by an RFX transcription factor isoform.
The following daf-19 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the daf-19 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OCa351816 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001267307.1 , NM_001267307.2 | |
| Accession Version | NM_001267307.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1986bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-09 | |
| Organism | Caenorhabditis elegans | |
| Product | hypothetical protein | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). COMPLETENESS: incomplete on both ends. | |
1 | ATGTTAGATC CTACAAAGAT ATCGTTGCAC TCGAGCTCAG TTGCCTATGG AGAGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001254236.1 |
| CDS | 1..1986 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001267307.1 |
1 | ATGTTAGATC CTACAAAGAT ATCGTTGCAC TCGAGCTCAG TTGCCTATGG AGAGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa351817 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001306556.1 , NM_001306556.2 | |
| Accession Version | NM_001306556.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1917bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-08 | |
| Organism | Caenorhabditis elegans | |
| Product | RFX-like transcription factor daf-19 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). COMPLETENESS: incomplete on both ends. | |
1 | ATGGAGGTCA TCCAACACTC GACAGACGAT CCGAATGGCA CGCGAGAGGA ATTCGACTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001293485.1 |
| CDS | 1..1917 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001306556.1 |
1 | ATGGAGGTCA TCCAACACTC GACAGACGAT CCGAATGGCA CGCGAGAGGA ATTCGACTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa338193 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001026969.3 , NM_001026969.4 | |
| Accession Version | NM_001026969.3 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2418bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-08 | |
| Organism | Caenorhabditis elegans | |
| Product | RFX-like transcription factor daf-19 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Jun 26, 2012 this sequence version replaced NM_001026969.2. COMPLETENESS: incomplete on both ends. | |
1 | ATGACCAATG AGGAGCCGGT GCCATCGACG AGCAGTGTGC TCAGTGCAGC CGAGAAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001022140.1 |
| CDS | 1..2418 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001026969.3 |
1 | ATGACCAATG AGGAGCCGGT GCCATCGACG AGCAGTGTGC TCAGTGCAGC CGAGAAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa338193 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001026969.3 , NM_001026969.4 | |
| Accession Version | NM_001026969.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2418bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-17 | |
| Organism | Caenorhabditis elegans | |
| Product | RFX-like transcription factor daf-19 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Sep 4, 2019 this sequence version replaced NM_001026969.3. | |
1 | ATGACCAATG AGGAGCCGGT GCCATCGACG AGCAGTGTGC TCAGTGCAGC CGAGAAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001022140.1 |
| CDS | 25..2442 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001026969.4 |
1 | ATGACCAATG AGGAGCCGGT GCCATCGACG AGCAGTGTGC TCAGTGCAGC CGAGAAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa339678 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001026968.4 , NM_001026968.3 | |
| Accession Version | NM_001026968.4 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2343bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-17 | |
| Organism | Caenorhabditis elegans | |
| Product | RFX-like transcription factor daf-19 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Sep 4, 2019 this sequence version replaced NM_001026968.3. | |
1 | ATGACCAATG AGGAGCCGGT GCCATCGACG AGCAGTGTGC TCAGTGCAGC CGAGAAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001022139.1 |
| CDS | 26..2368 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001026968.4 |
1 | ATGACCAATG AGGAGCCGGT GCCATCGACG AGCAGTGTGC TCAGTGCAGC CGAGAAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa339678 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001026968.4 , NM_001026968.3 | |
| Accession Version | NM_001026968.3 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2343bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-08 | |
| Organism | Caenorhabditis elegans | |
| Product | RFX-like transcription factor daf-19 | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Jun 26, 2012 this sequence version replaced NM_001026968.2. COMPLETENESS: incomplete on both ends. | |
1 | ATGACCAATG AGGAGCCGGT GCCATCGACG AGCAGTGTGC TCAGTGCAGC CGAGAAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001022139.1 |
| CDS | 1..2343 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001026968.3 |
1 | ATGACCAATG AGGAGCCGGT GCCATCGACG AGCAGTGTGC TCAGTGCAGC CGAGAAAAAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa351816 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001267307.1 , NM_001267307.2 | |
| Accession Version | NM_001267307.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1986bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-17 | |
| Organism | Caenorhabditis elegans | |
| Product | RFX-type winged-helix domain-containing protein | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Sep 4, 2019 this sequence version replaced NM_001267307.1. COMPLETENESS: incomplete on the 5' end. | |
1 | ATGTTAGATC CTACAAAGAT ATCGTTGCAC TCGAGCTCAG TTGCCTATGG AGAGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001254236.1 |
| CDS | 1..1986 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001267307.2 |
1 | ATGTTAGATC CTACAAAGAT ATCGTTGCAC TCGAGCTCAG TTGCCTATGG AGAGGAGTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa351817 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001306556.1 , NM_001306556.2 | |
| Accession Version | NM_001306556.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1917bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-17 | |
| Organism | Caenorhabditis elegans | |
| Product | RFX-type winged-helix domain-containing protein | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Sep 4, 2019 this sequence version replaced NM_001306556.1. COMPLETENESS: incomplete on the 5' end. | |
1 | ATGGAGGTCA TCCAACACTC GACAGACGAT CCGAATGGCA CGCGAGAGGA ATTCGACTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001293485.1 |
| CDS | 1..1917 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001306556.2 |
1 | ATGGAGGTCA TCCAACACTC GACAGACGAT CCGAATGGCA CGCGAGAGGA ATTCGACTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa351818 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001267308.2 , NM_001267308.1 | |
| Accession Version | NM_001267308.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1869bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-10-17 | |
| Organism | Caenorhabditis elegans | |
| Product | RFX-type winged-helix domain-containing protein | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). On Sep 4, 2019 this sequence version replaced NM_001267308.1. | |
1 | ATGTACCTAC CACAGTGCAA TACCATGTAC AGCGCGGTTA CTCCAAATGG CACATACACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001254237.1 |
| CDS | 167..2035 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001267308.2 |
1 | ATGTACCTAC CACAGTGCAA TACCATGTAC AGCGCGGTTA CTCCAAATGG CACATACACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OCa351818 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001267308.2 , NM_001267308.1 | |
| Accession Version | NM_001267308.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1869bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-04-09 | |
| Organism | Caenorhabditis elegans | |
| Product | hypothetical protein | |
| Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003280). COMPLETENESS: incomplete on both ends. | |
1 | ATGTACCTAC CACAGTGCAA TACCATGTAC AGCGCGGTTA CTCCAAATGG CACATACACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001254237.1 |
| CDS | 1..1869 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001267308.1 |
1 | ATGTACCTAC CACAGTGCAA TACCATGTAC AGCGCGGTTA CTCCAAATGG CACATACACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome sequence of the nematode C. elegans: a platform for investigating biology. |