LOC103844471 cDNA ORF clone, Brassica rapa(field mustard)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC103844471
Entrez Gene ID	103844471
Full Name	pentatricopeptide repeat-containing protein At2g15690
Gene Type	protein-coding
Organism	Brassica rapa(field mustard)

mRNA and Protein(s)

mRNA	Protein	Name
XM_009121256.2	XP_009119504.1	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g15690

Pathways from BioSystems
Gene Ontology

The following LOC103844471 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC103844471 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBr131576	XM_009121256.2 Latest version!	Brassica rapa pentatricopeptide repeat-containing protein At2g15690 (LOC103844471), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC103844471 ( XM_009121256.2 ) cDNA ORF clone, Brassica rapa(field mustard) -> XP_009119504.1 Brassica rapa pentatricopeptide repeat-containing protein At2g15690 (LOC103844471), mRNA.

Price & Availability↑

CloneID	OBr131576
Clone ID Related Accession (Same CDS sequence)	XM_009121256.2
Accession Version	XM_009121256.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1464bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-10-12
Organism	Brassica rapa(field mustard)
Product	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g15690
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024804.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 13, 2016 this sequence version replaced XM_009121256.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Brassica rapa Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 2% of CDS bases frameshifts :: corrected 2 indels ##RefSeq-Attributes-END##

ATGGCGGAAA AACGAGTCGT CCCCTTAATA CCTGCGTTAT TCTTGTCCGA TTGTCCCCCA 
ATCACCAAAG TTTCTGCTTC AAAAATTCAG AGAAATATCA TCTCTAATGG CGTTTCGATC 
CTGCCGAAGC CAGAAGATTC TCACAATAGG TTATCTGCTT CAGTTACGCT CCTCTTCTTC 
CCAATAAGTA CATCCACCGC CGCCACAAGT GATCCTTATC GAAATCCTCA GTCCGCCGCA 
TCTCCAGGCT TCGATTCTCA GCGGTTTCAG AATCAGAGAA ACAGTCCGCG AAACCCTAAT 
CAATGGAATC CCCAACACAG TGGTCAGTAT TATCATGGAA ACTCAAATCA AATCCCTAAT 
CAGAGCAATG AGATAATGCG CTTGTGCAAG CTCAGGAGAT ATAAAGATGC GATCGAGCTG 
CTTGATAAGG GAGCTATGCC TCCTGATAAA GACTGTTTCT CTTTGCTGTT CGAGTCTTGC 
GCGAATCTGA AATCGCTTGA GCACTCCAAG AAGGTACACG ATCACTTCCT GAGCTCTAAG 
TTTACAAGCG ATCCCAAGCT GAACAACGTT GTGATTCGTA TGTTCGGGGA GTGTACTAGT 
GTCACTGATT CTAAGAGAGT ATTTGATCAT ATGGCTGATA AAGATATGGA TTCTTGGCAC 
TTGATGATGC GTGTGTATAC TNNGAACGGA ATGGGAGATG GTGCGTTGCA CTTGTTTCTG 
GAGATGATGA AACAAGGGTT GAAACCGAAC GAGGAGACTT TCGTTGCGCT TTTCTCCGCT 
TGTGCTAGTG TTGATGCAAT AAAGGAGGCG TTTTTGCATT TTGATTCTAT GGAAAATGAG 
TTTGGGATTA CTCCAAGGAC AGAACATTAC TTGGGTCTTT TAGATGTTTT TGGAAAATGT 
GGACATCTTG TTCAGGCAGA GCAGTACATC CGCGACCTTC CATTTGAGCC CACAGCTGAG 
TTCTGGNNTA AGCTACATGG AGATATCAAT TTAGAGGATT ACGCAGAGGA GTTGATAGTT 
GATCTTGACC CTTCCAAGTC TGTAACCAAC AAAATCCCTA CCCCTCCACC AAAATCATAC 
ACGGACACAA GTATGCTTGC TAGTAAGAGT AGGATCCTTG AGTTTCGGAT TCTGACTTTT 
TACAAGGATG AAGCCAAGGA GATGGCTGCA AAGAAGGAAG CGGTTTATGT TCCAGATACT 
CGATGTATTC CGCATGACAT TGATGAAGAG GCTAAAGAAC AGGCACTGCT CTACCACAGT 
TGGAGGTTAG GCATTGCTTA TGGTATAAGA TGCACCCCGC CTCGGAAGTC TCTCACTATC 
ATCAAGGATC TCCCTGTGTG CAATGACTGC CATAACTTTA TCAAGATCAT GTCCAAAATC 
ATTGGTAGAA CGTTGATTGT GAGAGACAAC GAACGTTTCC ATCACTTCAG TGATGGTAAA 
TGTTCTTGTG GCGATTACTG GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_009119504.1
CDS	1..1464
Translation	MAEKRVVPLIPALFLSDCPPITKVSASKIQRNIISNGVSILPKPEDSHNRLSASVTLLFFPISTSTAATSDPYRNPQSAASPGFDSQRFQNQRNSPRNPNQWNPQHSGQYYHGNSNQIPNQSNEIMRLCKLRRYKDAIELLDKGAMPPDKDCFSLLFESCANLKSLEHSKKVHDHFLSSKFTSDPKLNNVVIRMFGECTSVTDSKRVFDHMADKDMDSWHLMMRVYTnullNGMGDGALHLFLEMMKQGLKPNEETFVALFSACASVDAIKEAFLHFDSMENEFGITPRTEHYLGLLDVFGKCGHLVQAEQYIRDLPFEPTAEFWnullKLHGDINLEDYAEELIVDLDPSKSVTNKIPTPPPKSYTDTSMLASKSRILEFRILTFYKDEAKEMAAKKEAVYVPDTRCIPHDIDEEAKEQALLYHSWRLGIAYGIRCTPPRKSLTIIKDLPVCNDCHNFIKIMSKIIGRTLIVRDNERFHHFSDGKCSCGDYW

Target ORF information:

RefSeq Version	XM_009121256.2
Organism	Brassica rapa(field mustard)
Definition	Brassica rapa pentatricopeptide repeat-containing protein At2g15690 (LOC103844471), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_009121256.2

ORF Insert Sequence:

ATGGCGGAAA AACGAGTCGT CCCCTTAATA CCTGCGTTAT TCTTGTCCGA TTGTCCCCCA 
ATCACCAAAG TTTCTGCTTC AAAAATTCAG AGAAATATCA TCTCTAATGG CGTTTCGATC 
CTGCCGAAGC CAGAAGATTC TCACAATAGG TTATCTGCTT CAGTTACGCT CCTCTTCTTC 
CCAATAAGTA CATCCACCGC CGCCACAAGT GATCCTTATC GAAATCCTCA GTCCGCCGCA 
TCTCCAGGCT TCGATTCTCA GCGGTTTCAG AATCAGAGAA ACAGTCCGCG AAACCCTAAT 
CAATGGAATC CCCAACACAG TGGTCAGTAT TATCATGGAA ACTCAAATCA AATCCCTAAT 
CAGAGCAATG AGATAATGCG CTTGTGCAAG CTCAGGAGAT ATAAAGATGC GATCGAGCTG 
CTTGATAAGG GAGCTATGCC TCCTGATAAA GACTGTTTCT CTTTGCTGTT CGAGTCTTGC 
GCGAATCTGA AATCGCTTGA GCACTCCAAG AAGGTACACG ATCACTTCCT GAGCTCTAAG 
TTTACAAGCG ATCCCAAGCT GAACAACGTT GTGATTCGTA TGTTCGGGGA GTGTACTAGT 
GTCACTGATT CTAAGAGAGT ATTTGATCAT ATGGCTGATA AAGATATGGA TTCTTGGCAC 
TTGATGATGC GTGTGTATAC TNNGAACGGA ATGGGAGATG GTGCGTTGCA CTTGTTTCTG 
GAGATGATGA AACAAGGGTT GAAACCGAAC GAGGAGACTT TCGTTGCGCT TTTCTCCGCT 
TGTGCTAGTG TTGATGCAAT AAAGGAGGCG TTTTTGCATT TTGATTCTAT GGAAAATGAG 
TTTGGGATTA CTCCAAGGAC AGAACATTAC TTGGGTCTTT TAGATGTTTT TGGAAAATGT 
GGACATCTTG TTCAGGCAGA GCAGTACATC CGCGACCTTC CATTTGAGCC CACAGCTGAG 
TTCTGGNNTA AGCTACATGG AGATATCAAT TTAGAGGATT ACGCAGAGGA GTTGATAGTT 
GATCTTGACC CTTCCAAGTC TGTAACCAAC AAAATCCCTA CCCCTCCACC AAAATCATAC 
ACGGACACAA GTATGCTTGC TAGTAAGAGT AGGATCCTTG AGTTTCGGAT TCTGACTTTT 
TACAAGGATG AAGCCAAGGA GATGGCTGCA AAGAAGGAAG CGGTTTATGT TCCAGATACT 
CGATGTATTC CGCATGACAT TGATGAAGAG GCTAAAGAAC AGGCACTGCT CTACCACAGT 
TGGAGGTTAG GCATTGCTTA TGGTATAAGA TGCACCCCGC CTCGGAAGTC TCTCACTATC 
ATCAAGGATC TCCCTGTGTG CAATGACTGC CATAACTTTA TCAAGATCAT GTCCAAAATC 
ATTGGTAGAA CGTTGATTGT GAGAGACAAC GAACGTTTCC ATCACTTCAG TGATGGTAAA 
TGTTCTTGTG GCGATTACTG GTAG