BHLHE41 cDNA ORF clone, Bos taurus(cattle)

Gene
Clones
gRNAs

Summary

Gene Symbol	BHLHE41
Entrez Gene ID	613907
Full Name	basic helix-loop-helix family member e41
Synonyms	BHLHB3
General protein information	Preferred Names basic helix-loop-helix family member e41 Names class E basic helix-loop-helix protein 41 basic helix-loop-helix domain containing, class B, 3
Gene Type	protein-coding
Organism	Bos taurus(cattle)
Summary	This gene encodes a basic helix-loop-helix protein expressed in various tissues. The encoded protein can interact with ARNTL or compete for E-box binding sites in the promoter of PER1 and repress CLOCK/ARNTL's transactivation of PER1. This gene is believed to be involved in the control of circadian rhythm and cell differentiation. Defects in this gene are associated with the short sleep phenotype. [provided by RefSeq, Feb 2014].

mRNA and Protein(s)

mRNA	Protein	Name
NM_001076297.1	NP_001069765.1	class E basic helix-loop-helix protein 41
XM_024992146.1	XP_024847914.1	class E basic helix-loop-helix protein 41 isoform X1

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	BHLHE41	NP_001002973.1
Gallus gallus (chicken)	BHLHE41	XP_004938106.1
Bos taurus (cattle)	BHLHE41	NP_001069765.1
Danio rerio (zebrafish)	bhlhe41	NP_001034196.1
Xenopus tropicalis (tropical clawed frog)	bhlhe41	NP_001027504.1

Gene Ontology
Bibliography

Related articles in PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following BHLHE41 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BHLHE41 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OBa234594	XM_024992146.1 Latest version!	Bos taurus basic helix-loop-helix family member e41 (BHLHE41), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
OBa44298	NM_001076297.1 Latest version!	Bos taurus basic helix-loop-helix family member e41 (BHLHE41), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$258.30 $369.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

BHLHE41 ( XM_024992146.1 ) cDNA ORF clone, Bos taurus(cattle) -> XP_024847914.1 Bos taurus basic helix-loop-helix family member e41 (BHLHE41), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OBa234594
Clone ID Related Accession (Same CDS sequence)	XM_024992146.1
Accession Version	XM_024992146.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1458bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-06
Organism	Bos taurus(cattle)
Product	class E basic helix-loop-helix protein 41 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037332.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGACGAAG GAATTCCTCA TTTGCAAGAA AGACAGTTAC TGGAACATAG AGATTTTATA 
GGACTGGATT ATCCCTCTTT GTATATGTGT AAGCCCAAAA GGAGCATGAA GCGAGACGAT 
AGCAAGGATA CCTACAAATT ACCGCACAGA TTAATAGAAA AGAAAAGAAG AGACCGAATT 
AATGAATGCA TTGCTCAGCT GAAAGACTTA CTGCCTGAAC ATCTAAAGTT GACAACTCTG 
GGGCATCTGG AGAAAGCTGT AGTCCTGGAA TTAACTTTGA AACACTTAAA AGCTTTGACA 
GCCTTAACGG AGCAGCAACA TCAGAAGATA ATTGCTTTAC AGAATGGGGA ACGATCTCTG 
AAATCGCCCA TTCAGTCCGA CTTGGATGCG TTCCACTCGG GATTTCAAAC ATGCGCCAAA 
GAAGTCTTGC AATACCTCGC CCGGTTTGAG AGCTGGACGC CCAGGGAGCC GCGGTGTGTC 
CAGCTGATCA ACCACTTGCA CGCCGTGGCC ACCCAGTTCT TGCCCACCCC GCAGCTGTTG 
ACTCAACAGG TTCCTCTGAG CAAAGGCACC GGCGCGCCCA CGGCGGCCGC CCCCGCCGGC 
TCCGGGGCCG CCCCCTGCCT GGAGCGCGCG GGGCAGAAGC TGGAGCCCCT CGCCCACTGC 
GTGCCGGTCA TCCAGCGGAC TCAGCCCAGC TCCGAGCTCG CCGCCGCCGA GAACGACACG 
GACACCGATA GCGGCTACGG TGGCGAGGCC GAGGCCCGGC CGGACCGCGA GAAGGGCAAA 
GGCGCGGGGG CGAGCCGCGT CACCATTAAG CAGGAGCCCC CCGGGGAGGA CTCGCCAGCG 
CCCAAGAGGA TGAGGCTGGA TACCCGCGGC GGCGGCGGCG GCCCGGGGGG CGGCGCGGCG 
GCGGCGGCGG CCGCGCTCCT GGGGCCCGAC CCGACCGCTG CGGCCGCGCT GCTGAGACCC 
GACGCCGCCC TGCTCAGCTC GCTGGTGGCG TTCGGCGGAG GCGGGGGCGC GCCCTTCGCG 
CAGCCGGCGG CCGCCGCGGC CCCTTTCTGC CTGCCCTTCT ACTTCCTCTC GCCTTCGGCG 
GCCGCCGCCT ACGTGCAGCC CTTCCTGGAC AAGAGCGGCC TGGAGAAGTA CCTGTACCCG 
GCGGCGGCCG CCGCCCCGTT TCCATTGCTG TACCCCGGCA TCCCTGCTCC GGCCGCCGCC 
GCCGCTGCCG CCGCGGCCGC GGCCGCCGCC GCCGCCTTCC CCTGCCTGTC CTCCGTGTTG 
TCGCCCCCTC CCGAGAAGGC GGCGGCCGCC GCCGCAGCCG CGACCCTCCT GCCACACGAG 
GTGGCGCCCC CTGGGGCTCT GCACCCCGCG CACCCGCACG GCCGCACCCA CCTGCCCTTC 
GCCGGCGCTC GCGAGCCCGG GAACCCGGAG AGCTCTGCTC AGGAAGATCC CTCGCAGCCA 
GCAAAGGAAA CCCTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_024847914.1
CDS	408..1865
Translation	MDEGIPHLQERQLLEHRDFIGLDYPSLYMCKPKRSMKRDDSKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLARFESWTPREPRCVQLINHLHAVATQFLPTPQLLTQQVPLSKGTGAPTAAAPAGSGAAPCLERAGQKLEPLAHCVPVIQRTQPSSELAAAENDTDTDSGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPAPKRMRLDTRGGGGGPGGGAAAAAAALLGPDPTAAAALLRPDAALLSSLVAFGGGGGAPFAQPAAAAAPFCLPFYFLSPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLLYPGIPAPAAAAAAAAAAAAAAAFPCLSSVLSPPPEKAAAAAAAATLLPHEVAPPGALHPAHPHGRTHLPFAGAREPGNPESSAQEDPSQPAKETL

Target ORF information:

RefSeq Version	XM_024992146.1
Organism	Bos taurus(cattle)
Definition	Bos taurus basic helix-loop-helix family member e41 (BHLHE41), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_024992146.1

ORF Insert Sequence:

ATGGACGAAG GAATTCCTCA TTTGCAAGAA AGACAGTTAC TGGAACATAG AGATTTTATA 
GGACTGGATT ATCCCTCTTT GTATATGTGT AAGCCCAAAA GGAGCATGAA GCGAGACGAT 
AGCAAGGATA CCTACAAATT ACCGCACAGA TTAATAGAAA AGAAAAGAAG AGACCGAATT 
AATGAATGCA TTGCTCAGCT GAAAGACTTA CTGCCTGAAC ATCTAAAGTT GACAACTCTG 
GGGCATCTGG AGAAAGCTGT AGTCCTGGAA TTAACTTTGA AACACTTAAA AGCTTTGACA 
GCCTTAACGG AGCAGCAACA TCAGAAGATA ATTGCTTTAC AGAATGGGGA ACGATCTCTG 
AAATCGCCCA TTCAGTCCGA CTTGGATGCG TTCCACTCGG GATTTCAAAC ATGCGCCAAA 
GAAGTCTTGC AATACCTCGC CCGGTTTGAG AGCTGGACGC CCAGGGAGCC GCGGTGTGTC 
CAGCTGATCA ACCACTTGCA CGCCGTGGCC ACCCAGTTCT TGCCCACCCC GCAGCTGTTG 
ACTCAACAGG TTCCTCTGAG CAAAGGCACC GGCGCGCCCA CGGCGGCCGC CCCCGCCGGC 
TCCGGGGCCG CCCCCTGCCT GGAGCGCGCG GGGCAGAAGC TGGAGCCCCT CGCCCACTGC 
GTGCCGGTCA TCCAGCGGAC TCAGCCCAGC TCCGAGCTCG CCGCCGCCGA GAACGACACG 
GACACCGATA GCGGCTACGG TGGCGAGGCC GAGGCCCGGC CGGACCGCGA GAAGGGCAAA 
GGCGCGGGGG CGAGCCGCGT CACCATTAAG CAGGAGCCCC CCGGGGAGGA CTCGCCAGCG 
CCCAAGAGGA TGAGGCTGGA TACCCGCGGC GGCGGCGGCG GCCCGGGGGG CGGCGCGGCG 
GCGGCGGCGG CCGCGCTCCT GGGGCCCGAC CCGACCGCTG CGGCCGCGCT GCTGAGACCC 
GACGCCGCCC TGCTCAGCTC GCTGGTGGCG TTCGGCGGAG GCGGGGGCGC GCCCTTCGCG 
CAGCCGGCGG CCGCCGCGGC CCCTTTCTGC CTGCCCTTCT ACTTCCTCTC GCCTTCGGCG 
GCCGCCGCCT ACGTGCAGCC CTTCCTGGAC AAGAGCGGCC TGGAGAAGTA CCTGTACCCG 
GCGGCGGCCG CCGCCCCGTT TCCATTGCTG TACCCCGGCA TCCCTGCTCC GGCCGCCGCC 
GCCGCTGCCG CCGCGGCCGC GGCCGCCGCC GCCGCCTTCC CCTGCCTGTC CTCCGTGTTG 
TCGCCCCCTC CCGAGAAGGC GGCGGCCGCC GCCGCAGCCG CGACCCTCCT GCCACACGAG 
GTGGCGCCCC CTGGGGCTCT GCACCCCGCG CACCCGCACG GCCGCACCCA CCTGCCCTTC 
GCCGGCGCTC GCGAGCCCGG GAACCCGGAG AGCTCTGCTC AGGAAGATCC CTCGCAGCCA 
GCAAAGGAAA CCCTCTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

BHLHE41 ( NM_001076297.1 ) cDNA ORF clone, Bos taurus(cattle) -> NP_001069765.1 Bos taurus basic helix-loop-helix family member e41 (BHLHE41), mRNA.

Price & Availability↑

CloneID	OBa44298
Clone ID Related Accession (Same CDS sequence)	NM_001076297.1
Accession Version	NM_001076297.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1125bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-13
Organism	Bos taurus(cattle)
Product	class E basic helix-loop-helix protein 41
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC120013.1. On Oct 4, 2006 this sequence version replaced XM_865112.1. ##Evidence-Data-START## Transcript exon combination :: BC120013.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN03145413, SAMN03145414 [ECO:0000350] ##Evidence-Data-END##

ATGGACGAAG GAATTCCTCA TTTGCAAGAA AGACAGTTAC TGGAACATAG AGATTTTATA 
GGACTGGATT ATCCCTCTTT GTATATGTGT AAGCCCAAAA GGAGCATGAA GCGAGACGAT 
AGCAAGGATA CCTACAAATT ACCGCACAGA TTAATAGAAA AGAAAAGAAG AGACCGAATT 
AATGAATGCA TTGCTCAGCT GAAAGACTTA CTGCCTGAAC ATCTAAAGTT GACAACTCTG 
GGGCATCTGG AGAAAGCTGT AGTCCTGGAA TTAACTTTGA AACACTTAAA AGCTTTGACA 
GCCTTAACGG AGCAGCAACA TCAGAAGATA ATTGCTTTAC AGAATGGGGA ACGATCTCTG 
AAATCGCCCA TTCAGTCCGA CTTGGATGCG TTCCACTCGG GATTTCAAAC ATGCGCCAAA 
GAAGTCTTGC AATACCTCGC CCGGTTTGAG AGCTGGACGC CCAGGGAGCC GCGGTGTGTC 
CAGCTGATCA ACCACTTGCA CGCCGTGGCC ACCCAGTTCT TGCCCACCCC GCAGCTGTTG 
ACTCAACAGG TTCCTCTGAG CAAAGGCACC GGCGCGCCCA CGGCGGCCGC CCCCGCCGGC 
TCCGGGGCCG CCCCCTGCCT GGAGCGCGCG GGGCAGAAGC TGGAGCCCCT CGCCCACTGC 
GTGCCGGTCA TCCAGCGGAC TCAGCCCAGC TCCGAGCTCG CCGCCGCCGA GAACGACACG 
GACACCGATA GCGGCTACGG TGGCGAGGCC GAGGCCCGGC CGGACCGCGA GAAGGGCAAA 
GGCGCGGGGG CGAGCCGCGT CACCATTAAG CAGGAGCCCC CCGGGGAGGA CTCGCCGCCG 
CCTTCCCCTG CCTGTCCTCC GTGTTGTCGC CCCCTCCCGA GAAGGCGGCG GCCGCCGCCG 
CAGCCGCGAC CCTCCTGCCA CACGAGGTGG CGCCCCCTGG GGCTCTGCAC CCCGCGCACC 
CGCACGGCCG CACCCACCTG CCCTTCGCCG GCGCTCGCGA GCCCGGGAAC CCGGAGAGCT 
CTGCTCAGGA AGATCCCTCG CAGCCAGCAA AGGAAACCCT CTGAATCCGT GCTCCACTTG 
AGAGGGGACC AGGGTTCACG CGGAATAATA ATATTAATAA GTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001069765.1
CDS	156..1280
Translation	MDEGIPHLQERQLLEHRDFIGLDYPSLYMCKPKRSMKRDDSKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLARFESWTPREPRCVQLINHLHAVATQFLPTPQLLTQQVPLSKGTGAPTAAAPAGSGAAPCLERAGQKLEPLAHCVPVIQRTQPSSELAAAENDTDTDSGYGGEAEARPDREKGKGAGASRVTIKQEPPGEDSPPPSPACPPCCRPLPRRRRPPPQPRPSCHTRWRPLGLCTPRTRTAAPTCPSPALASPGTRRALLRKIPRSQQRKPSESVLHLRGDQGSRGIIILIS

Target ORF information:

RefSeq Version	NM_001076297.1
Organism	Bos taurus(cattle)
Definition	Bos taurus basic helix-loop-helix family member e41 (BHLHE41), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001076297.1

ORF Insert Sequence:

ATGGACGAAG GAATTCCTCA TTTGCAAGAA AGACAGTTAC TGGAACATAG AGATTTTATA 
GGACTGGATT ATCCCTCTTT GTATATGTGT AAGCCCAAAA GGAGCATGAA GCGAGACGAT 
AGCAAGGATA CCTACAAATT ACCGCACAGA TTAATAGAAA AGAAAAGAAG AGACCGAATT 
AATGAATGCA TTGCTCAGCT GAAAGACTTA CTGCCTGAAC ATCTAAAGTT GACAACTCTG 
GGGCATCTGG AGAAAGCTGT AGTCCTGGAA TTAACTTTGA AACACTTAAA AGCTTTGACA 
GCCTTAACGG AGCAGCAACA TCAGAAGATA ATTGCTTTAC AGAATGGGGA ACGATCTCTG 
AAATCGCCCA TTCAGTCCGA CTTGGATGCG TTCCACTCGG GATTTCAAAC ATGCGCCAAA 
GAAGTCTTGC AATACCTCGC CCGGTTTGAG AGCTGGACGC CCAGGGAGCC GCGGTGTGTC 
CAGCTGATCA ACCACTTGCA CGCCGTGGCC ACCCAGTTCT TGCCCACCCC GCAGCTGTTG 
ACTCAACAGG TTCCTCTGAG CAAAGGCACC GGCGCGCCCA CGGCGGCCGC CCCCGCCGGC 
TCCGGGGCCG CCCCCTGCCT GGAGCGCGCG GGGCAGAAGC TGGAGCCCCT CGCCCACTGC 
GTGCCGGTCA TCCAGCGGAC TCAGCCCAGC TCCGAGCTCG CCGCCGCCGA GAACGACACG 
GACACCGATA GCGGCTACGG TGGCGAGGCC GAGGCCCGGC CGGACCGCGA GAAGGGCAAA 
GGCGCGGGGG CGAGCCGCGT CACCATTAAG CAGGAGCCCC CCGGGGAGGA CTCGCCGCCG 
CCTTCCCCTG CCTGTCCTCC GTGTTGTCGC CCCCTCCCGA GAAGGCGGCG GCCGCCGCCG 
CAGCCGCGAC CCTCCTGCCA CACGAGGTGG CGCCCCCTGG GGCTCTGCAC CCCGCGCACC 
CGCACGGCCG CACCCACCTG CCCTTCGCCG GCGCTCGCGA GCCCGGGAAC CCGGAGAGCT 
CTGCTCAGGA AGATCCCTCG CAGCCAGCAA AGGAAACCCT CTGAATCCGT GCTCCACTTG 
AGAGGGGACC AGGGTTCACG CGGAATAATA ATATTAATAA GTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A whole-genome assembly of the domestic cow, Bos taurus.
Genome biology10(4)R42(2009)
Zimin AV,Delcher AL,Florea L,Kelley DR,Schatz MC,Puiu D,Hanrahan F,Pertea G,Van Tassell CP,Sonstegard TS,Mar?ais G,Roberts M,Subramanian P,Yorke JA,Salzberg SL

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BHLHE41 cDNA ORF clone, Bos taurus(cattle)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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