Gene Symbol | CYP27B1 |
Entrez Gene ID | 539630 |
Full Name | cytochrome P450, family 27, subfamily B, polypeptide 1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » CYP27B1 cDNA ORF clone
Gene Symbol | CYP27B1 |
Entrez Gene ID | 539630 |
Full Name | cytochrome P450, family 27, subfamily B, polypeptide 1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001192284.1 | NP_001179213.1 | 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial |
XM_015471123.1 | XP_015326609.1 | 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial isoform X1 |
Homo sapiens (human) | CYP27B1 | NP_000776.1 |
Rattus norvegicus (Norway rat) | Cyp27b1 | NP_446215.1 |
Pan troglodytes (chimpanzee) | CYP27B1 | XP_509175.2 |
CYP27B1 | XP_001116450.1 | |
Canis lupus familiaris (dog) | CYP27B1 | XP_538254.3 |
Xenopus tropicalis (tropical clawed frog) | cyp27b1 | NP_001006907.1 |
Mus musculus (house mouse) | Cyp27b1 | NP_034139.2 |
Bos taurus (cattle) | CYP27B1 | NP_001179213.1 |
Danio rerio (zebrafish) | LOC793309 | XP_003199448.2 |
In vivo activation of the intracrine vitamin D pathway in innate immune cells and mammary tissue during a bacterial infection.
Nelson CD, Reinhardt TA, Beitz DC, Lippolis JD
PloS one5(11)e15469(2010 Nov)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Characterization of 954 bovine full-CDS cDNA sequences.
Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP
BMC genomics6166(2005 Nov)
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Smith TP, Grosse WM, Freking BA, Roberts AJ, Stone RT, Casas E, Wray JE, White J, Cho J, Fahrenkrug SC, Bennett GL, Heaton MP, Laegreid WW, Rohrer GA, Chitko-McKown CG, Pertea G, Holt I, Karamycheva S, Liang F, Quackenbush J, Keele JW
Genome research11(4)626-30(2001 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data show that in tissue and secreted cells from the infected mammary glands, 25-hydroxyvitamin D(3) 1alpha-hydroxylase (1alpha-OHase; CYP27B1) gene expression was significantly increased compared to expression in tissue and cells from the healthy mammary tissue.
Title: In vivo activation of the intracrine vitamin D pathway in innate immune cells and mammary tissue during a bacterial infection.
The following CYP27B1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CYP27B1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa40787 | |
Clone ID Related Accession (Same CDS sequence) | NM_001192284.1 | |
Accession Version | NM_001192284.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1527bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-28 | |
Organism | Bos taurus(cattle) | |
Product | 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000005.1. On Jul 17, 2010 this sequence version replaced XM_588481.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN04335740, SAMN04335746 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## |
1 | ATGACCCAGA CCCTCAAATT TGCATCCAGA GTGTTCCATC GCGTCCGCTG TCCTGAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001179213.1 |
CDS | 1..1527 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001192284.1 |
1 | ATGACCCAGA CCCTCAAATT TGCATCCAGA GTGTTCCATC GCGTCCGCTG TCCTGAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa90770 | |
Clone ID Related Accession (Same CDS sequence) | XM_015471123.1 | |
Accession Version | XM_015471123.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1224bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103925.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACCCAGA CCCTCAAATT TGCATCCAGA GTGTTCCATC GCGTCCGCTG TCCTGAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015326609.1 |
CDS | 577..1800 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015471123.1 |
1 | ATGACCCAGA CCCTCAAATT TGCATCCAGA GTGTTCCATC GCGTCCGCTG TCCTGAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
In vivo activation of the intracrine vitamin D pathway in innate immune cells and mammary tissue during a bacterial infection. |
A whole-genome assembly of the domestic cow, Bos taurus. |
Characterization of 954 bovine full-CDS cDNA sequences. |
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. |