Gene Symbol | PHYKPL |
Entrez Gene ID | 537241 |
Full Name | 5-phosphohydroxy-L-lysine phospho-lyase |
Synonyms | AGXT2L2 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » PHYKPL cDNA ORF clone
Gene Symbol | PHYKPL |
Entrez Gene ID | 537241 |
Full Name | 5-phosphohydroxy-L-lysine phospho-lyase |
Synonyms | AGXT2L2 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_010807163.2 | XP_010805465.2 | 5-phosphohydroxy-L-lysine phospho-lyase isoform X2 |
XM_015472160.1 | XP_015327646.1 | 5-phosphohydroxy-L-lysine phospho-lyase isoform X3 |
XM_024994412.1 | XP_024850180.1 | 5-phosphohydroxy-L-lysine phospho-lyase isoform X1 |
XM_010807162.2 | XP_010805464.2 | 5-phosphohydroxy-L-lysine phospho-lyase isoform X2 |
XM_010807162.3 | XP_010805464.3 | 5-phosphohydroxy-L-lysine phospho-lyase isoform X2 |
NM_001192899.1 | NP_001179828.1 | 5-phosphohydroxy-L-lysine phospho-lyase |
NM_001192899.2 | NP_001179828.1 | 5-phosphohydroxy-L-lysine phospho-lyase |
XM_010807160.2 | XP_010805462.1 | 5-phosphohydroxy-L-lysine phospho-lyase isoform X1 |
Homo sapiens (human) | PHYKPL | NP_699204.1 |
AGXT2L2 | XP_001095786.1 | |
Canis lupus familiaris (dog) | PHYKPL | XP_538569.2 |
Rattus norvegicus (Norway rat) | LOC100910122 | XP_003750863.1 |
Mus musculus (house mouse) | Phykpl | NP_082674.1 |
Pan troglodytes (chimpanzee) | AGXT2L2 | XP_003311041.2 |
Danio rerio (zebrafish) | zgc:123007 | NP_001032646.1 |
Bos taurus (cattle) | AGXT2L2 | NP_001179828.1 |
Gallus gallus (chicken) | AGXT2L2 | XP_414688.4 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PHYKPL gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHYKPL cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa21347 | |
Clone ID Related Accession (Same CDS sequence) | NM_001192899.1 | |
Accession Version | NM_001192899.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1353bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-22 | |
Organism | Bos taurus(cattle) | |
Product | 5-phosphohydroxy-L-lysine phospho-lyase | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DAAA02020063.1. On Jul 17, 2010 this sequence version replaced XM_617398.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN04019639, SAMN04019670 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCGGCTG ATCAGCGTGG GAAGGCCGCG ACTCTGGCCC TGAGGCGGCG GCTGCTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001179828.1 |
CDS | 1..1353 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001192899.1 |
1 | ATGGCGGCTG ATCAGCGTGG GAAGGCCGCG ACTCTGGCCC TGAGGCGGCG GCTGCTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa53595 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807160.2 | |
Accession Version | XM_010807160.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1359bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | 5-phosphohydroxy-L-lysine phospho-lyase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104024.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010807160.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCTG ATCAGCGTGG GAAGGCCGCG ACTCTGGCCC TGAGGCGGCG GCTGCTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805462.1 |
CDS | 135..1493 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807160.2 |
1 | ATGGCGGCTG ATCAGCGTGG GAAGGCCGCG ACTCTGGCCC TGAGGCGGCG GCTGCTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa236136 | |
Clone ID Related Accession (Same CDS sequence) | XM_024994412.1 , NM_001192899.2 | |
Accession Version | NM_001192899.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1353bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-06-15 | |
Organism | Bos taurus(cattle) | |
Product | 5-phosphohydroxy-L-lysine phospho-lyase | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000007.1. On May 30, 2018 this sequence version replaced NM_001192899.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGGCTG ATCAGCGTGG GAAGGCCGCG ACTCTGGCCC TGAGGCGGCG GCTGCTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001179828.1 |
CDS | 1..1353 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001192899.2 |
1 | ATGGCGGCTG ATCAGCGTGG GAAGGCCGCG ACTCTGGCCC TGAGGCGGCG GCTGCTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa236136 | |
Clone ID Related Accession (Same CDS sequence) | XM_024994412.1 , NM_001192899.2 | |
Accession Version | XM_024994412.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1353bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | 5-phosphohydroxy-L-lysine phospho-lyase isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGCTG ATCAGCGTGG GAAGGCCGCG ACTCTGGCCC TGAGGCGGCG GCTGCTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024850180.1 |
CDS | 260..1612 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024994412.1 |
1 | ATGGCGGCTG ATCAGCGTGG GAAGGCCGCG ACTCTGGCCC TGAGGCGGCG GCTGCTCAGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa236137 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807162.3 | |
Accession Version | XM_010807162.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1230bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | 5-phosphohydroxy-L-lysine phospho-lyase isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037334.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010807162.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATGATG AACAGGGGGC AGAATACATC GATTGCATCA ACAATGTGGC TCACGTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805464.3 |
CDS | 351..1580 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807162.3 |
1 | ATGTATGATG AACAGGGGGC AGAATACATC GATTGCATCA ACAATGTGGC TCACGTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa91113 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807163.2 , XM_010807162.2 | |
Accession Version | XM_010807163.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1236bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | 5-phosphohydroxy-L-lysine phospho-lyase isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104024.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010807163.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATGATG AACAGGGGGC AGAATACATC GATTGCATCA ACAATGTGGC TCACGTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805465.2 |
CDS | 136..1371 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807163.2 |
1 | ATGTATGATG AACAGGGGGC AGAATACATC GATTGCATCA ACAATGTGGC TCACGTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa91113 | |
Clone ID Related Accession (Same CDS sequence) | XM_010807163.2 , XM_010807162.2 | |
Accession Version | XM_010807162.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1236bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | 5-phosphohydroxy-L-lysine phospho-lyase isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104024.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010807162.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTATGATG AACAGGGGGC AGAATACATC GATTGCATCA ACAATGTGGC TCACGTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010805464.2 |
CDS | 351..1586 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010807162.2 |
1 | ATGTATGATG AACAGGGGGC AGAATACATC GATTGCATCA ACAATGTGGC TCACGTTGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa91114 | |
Clone ID Related Accession (Same CDS sequence) | XM_015472160.1 | |
Accession Version | XM_015472160.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1134bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | 5-phosphohydroxy-L-lysine phospho-lyase isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104024.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGGGGG AGGCCTGTGA TGGGTGGATT TCTTCCTTCA GATCTTCAGA CATGGCTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015327646.1 |
CDS | 439..1572 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015472160.1 |
1 | ATGTTGGGGG AGGCCTGTGA TGGGTGGATT TCTTCCTTCA GATCTTCAGA CATGGCTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |