Gene Symbol | C17H12orf49 |
Entrez Gene ID | 534423 |
Full Name | chromosome 17 open reading frame, human C12orf49 |
Synonyms | C12orf49,C9H12orf49 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » C17H12orf49 cDNA ORF clone
Gene Symbol | C17H12orf49 |
Entrez Gene ID | 534423 |
Full Name | chromosome 17 open reading frame, human C12orf49 |
Synonyms | C12orf49,C9H12orf49 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_010813956.3 | XP_010812258.1 | UPF0454 protein C12orf49 homolog isoform X2 |
NM_001076023.1 | NP_001069491.1 | UPF0454 protein C12orf49 homolog precursor |
XM_010813956.2 | XP_010812258.1 | UPF0454 protein C12orf49 homolog isoform X2 |
XM_005217882.4 | XP_005217939.1 | UPF0454 protein C12orf49 homolog isoform X1 |
XM_005217882.3 | XP_005217939.1 | UPF0454 protein C12orf49 homolog isoform X1 |
Pan troglodytes (chimpanzee) | C12H12orf49 | XP_001154941.1 |
Rattus norvegicus (Norway rat) | RGD1562310 | NP_001102536.1 |
Gallus gallus (chicken) | C15H12ORF49 | NP_001007842.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP000855 | XP_316825.5 |
Homo sapiens (human) | C12orf49 | NP_079014.1 |
Bos taurus (cattle) | C9H12orf49 | NP_001069491.1 |
Mus musculus (house mouse) | 2410131K14Rik | NP_001074705.1 |
Danio rerio (zebrafish) | zgc:110063 | NP_001018573.1 |
Xenopus tropicalis (tropical clawed frog) | c12orf49 | NP_001016016.1 |
C11H12orf49 | XP_001112172.1 | |
Drosophila melanogaster (fruit fly) | CG15643 | NP_788909.1 |
Canis lupus familiaris (dog) | LOC102153143 | XP_005622433.1 |
Canis lupus familiaris (dog) | C26H12orf49 | XP_540555.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following C17H12orf49 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the C17H12orf49 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa42706 | |
Clone ID Related Accession (Same CDS sequence) | NM_001076023.1 | |
Accession Version | NM_001076023.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 618bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-24 | |
Organism | Bos taurus(cattle) | |
Product | UPF0454 protein C12orf49 homolog precursor | |
Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BC118254.1. On or before Oct 4, 2006 this sequence version replaced XM_873727.1, XM_873822.1, XM_873918.1, XM_614187.2. ##Evidence-Data-START## Transcript exon combination :: BC118254.1, DN286726.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145412, SAMN03145413 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTGAACC TGGCGGCTAT GGTGTGGCGC CGGCTCCTGC GGAAGAGGTG GGTGCTCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001069491.1 |
CDS | 90..707 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001076023.1 |
1 | ATGGTGAACC TGGCGGCTAT GGTGTGGCGC CGGCTCCTGC GGAAGAGGTG GGTGCTCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa27913 | |
Clone ID Related Accession (Same CDS sequence) | XM_005217882.4 , XM_005217882.3 | |
Accession Version | XM_005217882.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 594bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | UPF0454 protein C12orf49 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037344.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005217882.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGCCGG GGCCCCGGTC CTGCCCCGCT CCGCGCCGGG ATGGTGAACC TGGCGGCTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005217939.1 |
CDS | 95..688 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005217882.4 |
1 | ATGCCGCCGG GGCCCCGGTC CTGCCCCGCT CCGCGCCGGG ATGGTGAACC TGGCGGCTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa27913 | |
Clone ID Related Accession (Same CDS sequence) | XM_005217882.4 , XM_005217882.3 | |
Accession Version | XM_005217882.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 594bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | UPF0454 protein C12orf49 homolog isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104457.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005217882.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGCCGG GGCCCCGGTC CTGCCCCGCT CCGCGCCGGG ATGGTGAACC TGGCGGCTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005217939.1 |
CDS | 88..681 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005217882.3 |
1 | ATGCCGCCGG GGCCCCGGTC CTGCCCCGCT CCGCGCCGGG ATGGTGAACC TGGCGGCTAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa52722 | |
Clone ID Related Accession (Same CDS sequence) | XM_010813956.3 , XM_010813956.2 | |
Accession Version | XM_010813956.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 537bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | UPF0454 protein C12orf49 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037344.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010813956.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCAAGT CATGTTTAAG GACTCCTACT GAAGAAAGGG CAGTGAGAGA TCGGAATCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010812258.1 |
CDS | 379..915 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010813956.3 |
1 | ATGTGCAAGT CATGTTTAAG GACTCCTACT GAAGAAAGGG CAGTGAGAGA TCGGAATCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa52722 | |
Clone ID Related Accession (Same CDS sequence) | XM_010813956.3 , XM_010813956.2 | |
Accession Version | XM_010813956.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 537bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | UPF0454 protein C12orf49 homolog isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104457.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010813956.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCAAGT CATGTTTAAG GACTCCTACT GAAGAAAGGG CAGTGAGAGA TCGGAATCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010812258.1 |
CDS | 262..798 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010813956.2 |
1 | ATGTGCAAGT CATGTTTAAG GACTCCTACT GAAGAAAGGG CAGTGAGAGA TCGGAATCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |