Gene Symbol | TSNAX |
Entrez Gene ID | 533927 |
Full Name | translin associated factor X |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » TSNAX cDNA ORF clone
Gene Symbol | TSNAX |
Entrez Gene ID | 533927 |
Full Name | translin associated factor X |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001314062.2 | NP_001300991.1 | translin-associated protein X isoform 2 |
NM_001076006.4 | NP_001069474.2 | translin-associated protein X isoform 1 |
NM_001076006.3 | NP_001069474.2 | translin-associated protein X isoform 1 |
NM_001314062.1 | NP_001300991.1 | translin-associated protein X isoform 2 |
Pan troglodytes (chimpanzee) | TSNAX | XP_514271.3 |
Canis lupus familiaris (dog) | TSNAX | XP_536345.2 |
Drosophila melanogaster (fruit fly) | Trax | NP_732021.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_09242 | XP_003709868.1 |
Rattus norvegicus (Norway rat) | Tsnax | NP_071598.1 |
Bos taurus (cattle) | TSNAX | NP_001069474.2 |
Danio rerio (zebrafish) | tsnax | NP_001025275.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP004585 | XP_315244.4 |
Homo sapiens (human) | TSNAX | NP_005990.1 |
Xenopus tropicalis (tropical clawed frog) | tsnax | NP_001006778.1 |
TSNAX | XP_001104647.1 | |
Mus musculus (house mouse) | Tsnax | NP_058605.1 |
Gallus gallus (chicken) | TSNAX | NP_001006403.1 |
Neurospora crassa | NCU06059 | XP_959822.1 |
Arabidopsis thaliana (thale cress) | AT2G03780 | NP_178473.2 |
Oryza sativa (rice) | Os01g0265900 | NP_001042673.2 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TSNAX gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TSNAX cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa14835 | |
Clone ID Related Accession (Same CDS sequence) | NM_001076006.4 , NM_001076006.3 | |
Accession Version | NM_001076006.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 873bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-22 | |
Organism | Bos taurus(cattle) | |
Product | translin-associated protein X isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH137560.1, BC120296.1, NKLS02000028.1, EW682396.1 and EV664525.1. On May 29, 2018 this sequence version replaced NM_001076006.3. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5571262.12785.1, SRR5571259.26058.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145414 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCAGCA AAGAAGGATC AGGAGGGTTC AGGAAAAGGA AGCATGACAA TTTCCCACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001069474.2 |
CDS | 122..994 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001076006.4 |
1 | ATGAGCAGCA AAGAAGGATC AGGAGGGTTC AGGAAAAGGA AGCATGACAA TTTCCCACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa14835 | |
Clone ID Related Accession (Same CDS sequence) | NM_001076006.4 , NM_001076006.3 | |
Accession Version | NM_001076006.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 873bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-22 | |
Organism | Bos taurus(cattle) | |
Product | translin-associated protein X isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH137560.1, BC120296.1, DAAA02061345.1, EW682396.1 and EV664525.1. On Oct 1, 2015 this sequence version replaced NM_001076006.2. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: EH137560.1, EE356151.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00120238, SAMN02403640 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCAGCA AAGAAGGATC AGGAGGGTTC AGGAAAAGGA AGCATGACAA TTTCCCACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001069474.2 |
CDS | 122..994 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001076006.3 |
1 | ATGAGCAGCA AAGAAGGATC AGGAGGGTTC AGGAAAAGGA AGCATGACAA TTTCCCACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa95436 | |
Clone ID Related Accession (Same CDS sequence) | NM_001314062.2 , NM_001314062.1 | |
Accession Version | NM_001314062.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 378bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-22 | |
Organism | Bos taurus(cattle) | |
Product | translin-associated protein X isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH137560.1, BC120296.1, NKLS02000028.1, EW682396.1 and EV664525.1. On May 29, 2018 this sequence version replaced NM_001314062.1. Transcript Variant: This variant (2) lacks an alternate exon in the 3' coding region, resulting in a frameshift and an early stop codon, compared to variant 1. The encoded isoform (2) is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC120296.1, EE253025.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145426 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCAGCA AAGAAGGATC AGGAGGGTTC AGGAAAAGGA AGCATGACAA TTTCCCACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001300991.1 |
CDS | 122..499 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001314062.2 |
1 | ATGAGCAGCA AAGAAGGATC AGGAGGGTTC AGGAAAAGGA AGCATGACAA TTTCCCACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa95436 | |
Clone ID Related Accession (Same CDS sequence) | NM_001314062.2 , NM_001314062.1 | |
Accession Version | NM_001314062.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 378bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-22 | |
Organism | Bos taurus(cattle) | |
Product | translin-associated protein X isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH137560.1, BC120296.1, DAAA02061345.1, EW682396.1 and EV664525.1. Transcript Variant: This variant (2) lacks an alternate exon in the 3' coding region, resulting in a frameshift and an early stop codon, compared to variant 1. The encoded isoform (2) is shorter than isoform 1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: BC120296.1, EE253025.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00120237, SAMN02403641 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAGCAGCA AAGAAGGATC AGGAGGGTTC AGGAAAAGGA AGCATGACAA TTTCCCACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001300991.1 |
CDS | 122..499 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001314062.1 |
1 | ATGAGCAGCA AAGAAGGATC AGGAGGGTTC AGGAAAAGGA AGCATGACAA TTTCCCACAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |