Gene Symbol | CASC1 |
Entrez Gene ID | 526444 |
Full Name | cancer susceptibility 1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » CASC1 cDNA ORF clone
Gene Symbol | CASC1 |
Entrez Gene ID | 526444 |
Full Name | cancer susceptibility 1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_024991820.1 | XP_024847588.1 | protein CASC1 isoform X2 |
XM_024991821.1 | XP_024847589.1 | protein CASC1 isoform X3 |
XM_024991819.1 | XP_024847587.1 | protein CASC1 isoform X1 |
XM_024991822.1 | XP_024847590.1 | protein CASC1 isoform X4 |
XM_024991824.1 | XP_024847592.1 | protein CASC1 isoform X5 |
NM_001046282.2 | NP_001039747.1 | protein CASC1 |
Homo sapiens (human) | CASC1 | NP_001076442.1 |
LOC707753 | XP_002798538.1 | |
Canis lupus familiaris (dog) | CASC1 | XP_005637486.1 |
Pan troglodytes (chimpanzee) | CASC1 | XP_003313838.1 |
Bos taurus (cattle) | CASC1 | NP_001039747.1 |
Mus musculus (house mouse) | Casc1 | NP_796196.3 |
Rattus norvegicus (Norway rat) | Casc1 | NP_001100097.2 |
Gallus gallus (chicken) | LOC101750345 | XP_004938058.1 |
Danio rerio (zebrafish) | casc1 | NP_001092924.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CASC1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CASC1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa44877 | |
Clone ID Related Accession (Same CDS sequence) | NM_001046282.2 | |
Accession Version | NM_001046282.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2148bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-24 | |
Organism | Bos taurus(cattle) | |
Product | protein CASC1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC114007.1. On Aug 30, 2012 this sequence version replaced NM_001046282.1. ##Evidence-Data-START## Transcript exon combination :: BC114007.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145415, SAMN03145419 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCTGGCA GTAAGAAAAA GAAAATCACC AAAGCTGACC GGTTGAAGCA GATACTAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001039747.1 |
CDS | 54..2201 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001046282.2 |
1 | ATGTCTGGCA GTAAGAAAAA GAAAATCACC AAAGCTGACC GGTTGAAGCA GATACTAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa234410 | |
Clone ID Related Accession (Same CDS sequence) | XM_024991819.1 | |
Accession Version | XM_024991819.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2166bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CASC1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037332.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCCCA AAGCAAAAAA GTCTGGCAGT AAGAAAAAGA AAATCACCAA AGCTGACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024847587.1 |
CDS | 83..2248 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024991819.1 |
1 | ATGGCTCCCA AAGCAAAAAA GTCTGGCAGT AAGAAAAAGA AAATCACCAA AGCTGACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa234411 | |
Clone ID Related Accession (Same CDS sequence) | XM_024991820.1 | |
Accession Version | XM_024991820.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2073bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CASC1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037332.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCATCAGC ATGAGGAAGC ACGTGTGAAA TATGAAAAAG AAGAAATGGA AAGACTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024847588.1 |
CDS | 91..2163 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024991820.1 |
1 | ATGCATCAGC ATGAGGAAGC ACGTGTGAAA TATGAAAAAG AAGAAATGGA AAGACTTGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa234412 | |
Clone ID Related Accession (Same CDS sequence) | XM_024991821.1 | |
Accession Version | XM_024991821.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2028bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CASC1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037332.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAAGAC TTGAAATACA ACGAATTGAG AATGAAAAAT TGCAAAAACT TGAAGCAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024847589.1 |
CDS | 212..2239 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024991821.1 |
1 | ATGGAAAGAC TTGAAATACA ACGAATTGAG AATGAAAAAT TGCAAAAACT TGAAGCAAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa234413 | |
Clone ID Related Accession (Same CDS sequence) | XM_024991822.1 | |
Accession Version | XM_024991822.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2028bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CASC1 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037332.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCCCA AAGCAAAAAA GTCTGGCAGT AAGAAAAAGA AAATCACCAA AGCTGACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024847590.1 |
CDS | 86..2113 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024991822.1 |
1 | ATGGCTCCCA AAGCAAAAAA GTCTGGCAGT AAGAAAAAGA AAATCACCAA AGCTGACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa234414 | |
Clone ID Related Accession (Same CDS sequence) | XM_024991824.1 | |
Accession Version | XM_024991824.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1929bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein CASC1 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037332.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTCCCA AAGCAAAAAA GTCTGGCAGT AAGAAAAAGA AAATCACCAA AGCTGACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024847592.1 |
CDS | 83..2011 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024991824.1 |
1 | ATGGCTCCCA AAGCAAAAAA GTCTGGCAGT AAGAAAAAGA AAATCACCAA AGCTGACCGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |