Gene Symbol | BOLA-DOA |
Entrez Gene ID | 525727 |
Full Name | major histocompatibility complex, class II, DO alpha |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » BOLA-DOA cDNA ORF clone
Gene Symbol | BOLA-DOA |
Entrez Gene ID | 525727 |
Full Name | major histocompatibility complex, class II, DO alpha |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_010818051.3 | XP_010816353.1 | HLA class II histocompatibility antigen, DO alpha chain isoform X2 |
XM_010818051.2 | XP_010816353.1 | HLA class II histocompatibility antigen, DO alpha chain isoform X2 |
XM_010818050.2 | XP_010816352.1 | HLA class II histocompatibility antigen, DO alpha chain isoform X1 |
NM_001205920.1 | NP_001192849.1 | HLA class II histocompatibility antigen, DO alpha chain precursor |
XM_010818050.3 | XP_010816352.1 | HLA class II histocompatibility antigen, DO alpha chain isoform X1 |
Homo sapiens (human) | HLA-DOA | NP_002110.1 |
Pan troglodytes (chimpanzee) | LOC471979 | XP_527358.2 |
MAMU-DOA | XP_001115887.1 | |
Bos taurus (cattle) | BOLA-DOA | NP_001192849.1 |
Canis lupus familiaris (dog) | DLA-DOA | XP_532104.3 |
Mus musculus (house mouse) | H2-Oa | NP_032232.2 |
Rattus norvegicus (Norway rat) | RT1-DOa | NP_898874.2 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Comparative analysis of the bovine MHC class IIb sequence identifies inversion breakpoints and three unexpected genes.
Childers CP, Newkirk HL, Honeycutt DA, Ramlachan N, Muzney DM, Sodergren E, Gibbs RA, Weinstock GM, Womack JE, Skow LC
Animal genetics37(2)121-9(2006 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following BOLA-DOA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BOLA-DOA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa38823 | |
Clone ID Related Accession (Same CDS sequence) | NM_001205920.1 | |
Accession Version | NM_001205920.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 753bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-28 | |
Organism | Bos taurus(cattle) | |
Product | HLA class II histocompatibility antigen, DO alpha chain precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000023.1. On Apr 20, 2011 this sequence version replaced XM_604082.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5571259.16462.1, SRR5571261.7119.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN05861871 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTCCTCA GGGGGAGGCT GGTCCTGGGA CTGCACACCT TGATGACCCT CCTGAGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001192849.1 |
CDS | 30..782 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001205920.1 |
1 | ATGGTCCTCA GGGGGAGGCT GGTCCTGGGA CTGCACACCT TGATGACCCT CCTGAGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa51074 | |
Clone ID Related Accession (Same CDS sequence) | XM_010818050.2 , XM_010818050.3 | |
Accession Version | XM_010818050.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 837bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | HLA class II histocompatibility antigen, DO alpha chain isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104548.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010818050.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTCA GGGGGAGGCT GGTCCTGGGA CTGCACACCT TGATGACCCT CCTGAGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010816352.1 |
CDS | 58..894 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010818050.2 |
1 | ATGGTCCTCA GGGGGAGGCT GGTCCTGGGA CTGCACACCT TGATGACCCT CCTGAGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa51074 | |
Clone ID Related Accession (Same CDS sequence) | XM_010818050.2 , XM_010818050.3 | |
Accession Version | XM_010818050.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 837bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | HLA class II histocompatibility antigen, DO alpha chain isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037350.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010818050.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTCA GGGGGAGGCT GGTCCTGGGA CTGCACACCT TGATGACCCT CCTGAGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010816352.1 |
CDS | 76..912 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010818050.3 |
1 | ATGGTCCTCA GGGGGAGGCT GGTCCTGGGA CTGCACACCT TGATGACCCT CCTGAGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa51075 | |
Clone ID Related Accession (Same CDS sequence) | XM_010818051.3 , XM_010818051.2 | |
Accession Version | XM_010818051.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | HLA class II histocompatibility antigen, DO alpha chain isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037350.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010818051.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTCA GGGGGAGGCT GGTCCTGGGA CTGCACACCT TGATGACCCT CCTGAGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010816353.1 |
CDS | 76..750 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010818051.3 |
1 | ATGGTCCTCA GGGGGAGGCT GGTCCTGGGA CTGCACACCT TGATGACCCT CCTGAGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa51075 | |
Clone ID Related Accession (Same CDS sequence) | XM_010818051.3 , XM_010818051.2 | |
Accession Version | XM_010818051.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 675bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | HLA class II histocompatibility antigen, DO alpha chain isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104548.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010818051.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTCA GGGGGAGGCT GGTCCTGGGA CTGCACACCT TGATGACCCT CCTGAGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010816353.1 |
CDS | 58..732 |
Translation |
Target ORF information:
Target ORF information:
|
XM_010818051.2 |
1 | ATGGTCCTCA GGGGGAGGCT GGTCCTGGGA CTGCACACCT TGATGACCCT CCTGAGCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
Comparative analysis of the bovine MHC class IIb sequence identifies inversion breakpoints and three unexpected genes. |