Gene Symbol | CATHL5 |
Entrez Gene ID | 282167 |
Full Name | cathelicidin 5 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
Genome |
ORF » Species Summary » Bos taurus » CATHL5 cDNA ORF clone
Gene Symbol | CATHL5 |
Entrez Gene ID | 282167 |
Full Name | cathelicidin 5 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
Genome |
mRNA | Protein | Name |
---|---|---|
NM_174510.3 | NP_776935.1 | cathelicidin-5 precursor |
XM_024982399.1 | XP_024838167.1 | cathelicidin-5 isoform X1 |
Canis lupus familiaris (dog) | CAMP | NP_001003359.1 |
Bos taurus (cattle) | CATHL2 | NP_777251.1 |
Bos taurus (cattle) | CATHL6 | NP_777257.1 |
Homo sapiens (human) | CAMP | NP_004336.3 |
Pan troglodytes (chimpanzee) | CAMP | NP_001065283.1 |
Bos taurus (cattle) | LOC101907368 | XP_005201109.1 |
Mus musculus (house mouse) | Camp | NP_034051.2 |
CAMP | NP_001028681.1 | |
Bos taurus (cattle) | CAMP | NP_777256.1 |
Bos taurus (cattle) | CATHL3 | NP_776426.1 |
Bos taurus (cattle) | CATHL1 | NP_777250.1 |
Bos taurus (cattle) | CATHL5 | NP_776935.1 |
Rattus norvegicus (Norway rat) | Camp | NP_001094194.1 |
Bos taurus (cattle) | CATHL4 | NP_777252.1 |
Bos taurus (cattle) | LOC515991 | XP_002697130.2 |
Genetic polymorphisms of the BMAP-28 and MASP-2 genes and their correlation with the somatic cell score in Chinese Holstein cattle.
Wu J, Bai JY, Li L, Huang S, Li CM, Wang GL
Genetics and molecular research : GMR14(1)1-8(2015 Jan)
Stability, toxicity, and biological activity of host defense peptide BMAP28 and its inversed and retro-inversed isomers.
Kindrachuk J, Scruten E, Attah-Poku S, Bell K, Potter A, Babiuk LA, Griebel PJ, Napper S
Biopolymers96(1)14-24(2011)
Sequence analysis and polymorphism discovery in 4 members of the bovine cathelicidin gene family.
Gillenwaters EN, Seabury CM, Elliott JS, Womack JE
The Journal of heredity100(2)241-5(2009 Mar-Apr)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Biological characterization of two novel cathelicidin-derived peptides and identification of structural requirements for their antimicrobial and cell lytic activities.
Skerlavaj B, Gennaro R, Bagella L, Merluzzi L, Risso A, Zanetti M
The Journal of biological chemistry271(45)28375-81(1996 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
the combination of the BMAP-28 genotype CC and the MASP-2 genotype GG was the best one, in which the somatic cell score was significantly lower than those in the other combinations.
Title: Genetic polymorphisms of the BMAP-28 and MASP-2 genes and their correlation with the somatic cell score in Chinese Holstein cattle.
Data show that L Bmap28 was highly sensitive to proteolysis by proteases.
Title: Stability, toxicity, and biological activity of host defense peptide BMAP28 and its inversed and retro-inversed isomers.
Characterization of single nucleotide polymorphisms (SNPs) and insertion-deletion (indel) polymorphisms within the bovine CATHL gene family.
Title: Sequence analysis and polymorphism discovery in 4 members of the bovine cathelicidin gene family.
The following CATHL5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CATHL5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa00711 | |
Clone ID Related Accession (Same CDS sequence) | NM_174510.3 | |
Accession Version | NM_174510.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 480bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-25 | |
Organism | Bos taurus(cattle) | |
Product | cathelicidin-5 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from X97609.1. On Aug 31, 2012 this sequence version replaced NM_174510.2. ##Evidence-Data-START## Transcript exon combination :: X97609.1, BC142015.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145426 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGAGACCC AGAGGGCCAG CCTCTCCCTG GGACGGTGGT CACTGTGGCT ACTGCTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_776935.1 |
CDS | 13..492 |
Translation |
Target ORF information:
Target ORF information:
|
NM_174510.3 |
1 | ATGGAGACCC AGAGGGCCAG CCTCTCCCTG GGACGGTGGT CACTGTGGCT ACTGCTGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa228736 | |
Clone ID Related Accession (Same CDS sequence) | XM_024982399.1 | |
Accession Version | XM_024982399.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 663bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | cathelicidin-5 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037349.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGTCTA GGGGAGGTCA AGGTATTGTA GGAGATGGAG AAACCATTTC TTCACCTTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024838167.1 |
CDS | 685..1347 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024982399.1 |
1 | ATGGGGTCTA GGGGAGGTCA AGGTATTGTA GGAGATGGAG AAACCATTTC TTCACCTTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genetic polymorphisms of the BMAP-28 and MASP-2 genes and their correlation with the somatic cell score in Chinese Holstein cattle. |
Stability, toxicity, and biological activity of host defense peptide BMAP28 and its inversed and retro-inversed isomers. |
Sequence analysis and polymorphism discovery in 4 members of the bovine cathelicidin gene family. |
A whole-genome assembly of the domestic cow, Bos taurus. |
Biological characterization of two novel cathelicidin-derived peptides and identification of structural requirements for their antimicrobial and cell lytic activities. |