Gene Symbol | SHISA9 |
Entrez Gene ID | 100139490 |
Full Name | shisa family member 9 |
Synonyms | CKAMP44 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » SHISA9 cDNA ORF clone
Gene Symbol | SHISA9 |
Entrez Gene ID | 100139490 |
Full Name | shisa family member 9 |
Synonyms | CKAMP44 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_005224678.2 | XP_005224735.1 | protein shisa-9 isoform X1 |
XM_005224678.1 | XP_005224735.1 | protein shisa-9 isoform X1 |
XM_005224679.1 | XP_005224736.1 | protein shisa-9 isoform X2 |
XM_005224679.2 | XP_005224736.1 | protein shisa-9 isoform X2 |
NM_001145203.1 | NP_001138675.2 | protein shisa-9 precursor |
CKAMP44: a brain-specific protein attenuating short-term synaptic plasticity in the dentate gyrus.
von Engelhardt J, Mack V, Sprengel R, Kavenstock N, Li KW, Stern-Bach Y, Smit AB, Seeburg PH, Monyer H
Science (New York, N.Y.)327(5972)1518-22(2010 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Functionally characterizes an homologous mouse gene.
Title: CKAMP44: a brain-specific protein attenuating short-term synaptic plasticity in the dentate gyrus.
The following SHISA9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SHISA9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa40025 | |
Clone ID Related Accession (Same CDS sequence) | NM_001145203.1 | |
Accession Version | NM_001145203.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 939bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-13 | |
Organism | Bos taurus(cattle) | |
Product | protein shisa-9 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH177874.1 and EH181025.1. On Feb 18, 2009 this sequence version replaced XM_001789448.1. ##Evidence-Data-START## Transcript exon combination :: EH181025.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145443 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: downstream AUG is associated with N-terminal localization signal ##RefSeq-Attributes-END## |
1 | ATGCGCCGCG TCCTCCGGCT GCTCCTCGGC TGCTTCCTCA CCGAGCTGTG CGCCCGCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001138675.2 |
CDS | 183..1121 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001145203.1 |
1 | ATGCGCCGCG TCCTCCGGCT GCTCCTCGGC TGCTTCCTCA CCGAGCTGTG CGCCCGCGTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32931 | |
Clone ID Related Accession (Same CDS sequence) | XM_005224678.2 , XM_005224678.1 | |
Accession Version | XM_005224678.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1401bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein shisa-9 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037352.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005224678.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCGGCC CGCGGCGGCT CGCAGCCCCC GGCAGCAGCC TCGGCAGCTT CGGCCGCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005224735.1 |
CDS | 54..1454 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005224678.2 |
1 | ATGTGCGGCC CGCGGCGGCT CGCAGCCCCC GGCAGCAGCC TCGGCAGCTT CGGCCGCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32931 | |
Clone ID Related Accession (Same CDS sequence) | XM_005224678.2 , XM_005224678.1 | |
Accession Version | XM_005224678.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1401bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | protein shisa-9 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104572.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCGGCC CGCGGCGGCT CGCAGCCCCC GGCAGCAGCC TCGGCAGCTT CGGCCGCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005224735.1 |
CDS | 54..1454 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005224678.1 |
1 | ATGTGCGGCC CGCGGCGGCT CGCAGCCCCC GGCAGCAGCC TCGGCAGCTT CGGCCGCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32932 | |
Clone ID Related Accession (Same CDS sequence) | XM_005224679.1 , XM_005224679.2 | |
Accession Version | XM_005224679.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1353bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | protein shisa-9 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104572.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCGGCC CGCGGCGGCT CGCAGCCCCC GGCAGCAGCC TCGGCAGCTT CGGCCGCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005224736.1 |
CDS | 54..1406 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005224679.1 |
1 | ATGTGCGGCC CGCGGCGGCT CGCAGCCCCC GGCAGCAGCC TCGGCAGCTT CGGCCGCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32932 | |
Clone ID Related Accession (Same CDS sequence) | XM_005224679.1 , XM_005224679.2 | |
Accession Version | XM_005224679.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1353bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | protein shisa-9 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037352.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005224679.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCGGCC CGCGGCGGCT CGCAGCCCCC GGCAGCAGCC TCGGCAGCTT CGGCCGCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005224736.1 |
CDS | 54..1406 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005224679.2 |
1 | ATGTGCGGCC CGCGGCGGCT CGCAGCCCCC GGCAGCAGCC TCGGCAGCTT CGGCCGCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CKAMP44: a brain-specific protein attenuating short-term synaptic plasticity in the dentate gyrus. |