Gene Symbol | AT1G09200 |
Entrez Gene ID | 837440 |
Full Name | Histone superfamily protein |
Synonyms | H3.1,T12M4.9,histone 3.1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT1G09200 cDNA ORF clone
Gene Symbol | AT1G09200 |
Entrez Gene ID | 837440 |
Full Name | Histone superfamily protein |
Synonyms | H3.1,T12M4.9,histone 3.1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_100790.3 | NP_563838.1 | Histone superfamily protein |
Gallus gallus (chicken) | LOC769852 | XP_001233171.3 |
Arabidopsis thaliana (thale cress) | AT1G09200 | NP_563838.1 |
Arabidopsis thaliana (thale cress) | AT3G27360 | NP_189372.1 |
Arabidopsis thaliana (thale cress) | AT5G65360 | NP_201339.1 |
Oryza sativa (rice) | Os11g0155900 | NP_001065791.1 |
Xenopus tropicalis (tropical clawed frog) | LOC101735277 | XP_004914343.1 |
Rattus norvegicus (Norway rat) | Hist1h3a | XP_006254054.1 |
Oryza sativa (rice) | Os01g0866200 | NP_001044904.1 |
Oryza sativa (rice) | Os05g0438700 | NP_001055660.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100496129 | XP_004917457.1 |
Oryza sativa (rice) | Os06g0159501 | NP_001174611.1 |
Oryza sativa (rice) | Os06g0160100 | NP_001056877.1 |
Oryza sativa (rice) | Os06g0160001 | NP_001174613.1 |
Xenopus tropicalis (tropical clawed frog) | LOC101731144 | XP_004917456.1 |
Drosophila melanogaster (fruit fly) | His3:CG33827 | NP_001027323.1 |
Arabidopsis thaliana (thale cress) | AT5G10400 | NP_568228.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100485665 | XP_004914351.1 |
Danio rerio (zebrafish) | si:ch211-113a14.23 | XP_005163258.1 |
Arabidopsis thaliana (thale cress) | AT5G10390 | NP_568227.1 |
Oryza sativa (rice) | Os04g0419600 | NP_001052776.1 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Results suggest that At3g03940 and At5g18190 are involved in the phosphorylation of histone H3 at threonine 3 (H3T3) in pericentromeric/knob regions.
Title: Osmotic stress induces phosphorylation of histone H3 at threonine 3 in pericentromeric regions of Arabidopsis thaliana.
Data indicate that H3K9 dimethylation level in mutants ros1 fpgs1 (folylpolyglutamate synthase 1) was clearly reduced.
Title: Folate polyglutamylation is involved in chromatin silencing by maintaining global DNA methylation and histone H3K9 dimethylation in Arabidopsis.
Data indicate that during the response to dehydration stress the changes in H3K4me1, H3K4me2, and H3K4me3 patterns show different dynamics and specific patterns at up-regulated, down-regulated, and unaffected genes.
Title: Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana.
Data show that transposable elements are specifically targeted by H3K27me3 in the endosperm.
Title: H3K27me3 profiling of the endosperm implies exclusion of polycomb group protein targeting by DNA methylation.
The following AT1G09200 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT1G09200 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb31070 | |
Clone ID Related Accession (Same CDS sequence) | NM_100790.3 | |
Accession Version | NM_100790.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 411bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Histone superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_100790.2. |
1 | ATGGCTCGTA CCAAGCAGAC GGCTAGGAAA TCAACCGGAG GAAAGGCTCC AAGGAAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_563838.1 |
CDS | 203..613 |
Translation |
Target ORF information:
Target ORF information:
|
NM_100790.3 |
1 | ATGGCTCGTA CCAAGCAGAC GGCTAGGAAA TCAACCGGAG GAAAGGCTCC AAGGAAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |