Gene Symbol | RPT5B |
Entrez Gene ID | 837431 |
Full Name | 26S proteasome AAA-ATPase subunit RPT5B |
Synonyms | 26S proteasome AAA-ATPase subunit RPT5B,F7G19.2,F7G19_2 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » RPT5B cDNA ORF clone
Gene Symbol | RPT5B |
Entrez Gene ID | 837431 |
Full Name | 26S proteasome AAA-ATPase subunit RPT5B |
Synonyms | 26S proteasome AAA-ATPase subunit RPT5B,F7G19.2,F7G19_2 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_100781.5 | NP_172384.1 | 26S proteasome AAA-ATPase subunit RPT5B |
Canis lupus familiaris (dog) | PSMC3 | XP_533187.3 |
Bos taurus (cattle) | PSMC3 | NP_001179113.2 |
Mus musculus (house mouse) | Psmc3 | NP_032974.2 |
Caenorhabditis elegans (roundworm) | rpt-5 | NP_491672.1 |
Eremothecium gossypii | AGOS_AER254W | NP_985111.2 |
Oryza sativa (rice) | Os06g0173100 | NP_001056944.1 |
Homo sapiens (human) | PSMC3 | NP_002795.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP000616 | XP_310465.3 |
Arabidopsis thaliana (thale cress) | RPT5A | NP_187204.1 |
Saccharomyces cerevisiae (baker's yeast) | RPT5 | NP_014760.3 |
Magnaporthe oryzae (rice blast fungus) | MGG_12925 | XP_003712713.1 |
Oryza sativa (rice) | Os02g0803700 | NP_001048428.1 |
Pan troglodytes (chimpanzee) | PSMC3 | XP_508413.3 |
PSMC3 | XP_001106497.1 | |
Rattus norvegicus (Norway rat) | Psmc3 | NP_113783.1 |
Gallus gallus (chicken) | PSMC3 | NP_001026361.1 |
Drosophila melanogaster (fruit fly) | Tbp-1 | NP_524464.1 |
Danio rerio (zebrafish) | psmc3 | NP_001002064.1 |
Kluyveromyces lactis | KLLA0E21209g | XP_454909.1 |
Schizosaccharomyces pombe (fission yeast) | rpt5 | XP_001713083.1 |
Neurospora crassa | NCU04414 | XP_957491.2 |
Arabidopsis thaliana (thale cress) | RPT5B | NP_172384.1 |
Xenopus tropicalis (tropical clawed frog) | psmc3 | NP_001006786.1 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The accession-dependent unequal redundancy between RPT5a and RPT5b genes illustrates an example of evolutionary drifting between duplicated genes through alternative splicing
Title: A SNP associated with alternative splicing of RPT5b causes unequal redundancy between RPT5a and RPT5b among Arabidopsis thaliana natural variation.
RPT5 subunits are essential for both male and female gametophyte development.
Title: The Arabidopsis proteasome RPT5 subunits are essential for gametophyte development and show accession-dependent redundancy.
The following RPT5B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RPT5B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb31060 | |
Clone ID Related Accession (Same CDS sequence) | NM_100781.5 | |
Accession Version | NM_100781.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1272bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | 26S proteasome AAA-ATPase subunit RPT5B | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_100781.4. |
1 | ATGGCAACGG CGATGGCGGA GGATACGAGC TTCGAGGGAG ACCAACTAGC TTCCATGACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_172384.1 |
CDS | 106..1377 |
Translation |
Target ORF information:
Target ORF information:
|
NM_100781.5 |
1 | ATGGCAACGG CGATGGCGGA GGATACGAGC TTCGAGGGAG ACCAACTAGC TTCCATGACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |