Gene Symbol | AT5G48220 |
Entrez Gene ID | 834875 |
Full Name | Aldolase-type TIM barrel family protein |
Synonyms | MIF21.11,MIF21_11 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT5G48220 cDNA ORF clone
Gene Symbol | AT5G48220 |
Entrez Gene ID | 834875 |
Full Name | Aldolase-type TIM barrel family protein |
Synonyms | MIF21.11,MIF21_11 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001085265.2 | NP_001078734.1 | Aldolase-type TIM barrel family protein |
NM_001203559.1 | NP_001190488.1 | Aldolase-type TIM barrel family protein |
NM_001344764.1 | NP_001318761.1 | Aldolase-type TIM barrel family protein |
NM_124197.3 | NP_199633.1 | Aldolase-type TIM barrel family protein |
Oryza sativa (rice) | Os09g0255400 | NP_001062693.1 |
Arabidopsis thaliana (thale cress) | AT5G48220 | NP_199633.1 |
Arabidopsis thaliana (thale cress) | AT2G04400 | NP_178521.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following AT5G48220 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G48220 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb20901 | |
Clone ID Related Accession (Same CDS sequence) | NM_001085265.2 , NM_001344764.1 | |
Accession Version | NM_001085265.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 951bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Aldolase-type TIM barrel family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_001085265.1. COMPLETENESS: incomplete on the 3' end. |
1 | ATGTACCAGA ATGAAGTAGT TGAGAGTCAA GGTATAAGGA TAAGGAGAAG ACCACCTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001078734.1 |
CDS | 356..1306 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001085265.2 |
1 | ATGTACCAGA ATGAAGTAGT TGAGAGTCAA GGTATAAGGA TAAGGAGAAG ACCACCTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb20901 | |
Clone ID Related Accession (Same CDS sequence) | NM_001085265.2 , NM_001344764.1 | |
Accession Version | NM_001344764.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 951bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Aldolase-type TIM barrel family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGTACCAGA ATGAAGTAGT TGAGAGTCAA GGTATAAGGA TAAGGAGAAG ACCACCTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001318761.1 |
CDS | 493..1443 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001344764.1 |
1 | ATGTACCAGA ATGAAGTAGT TGAGAGTCAA GGTATAAGGA TAAGGAGAAG ACCACCTACT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb20902 | |
Clone ID Related Accession (Same CDS sequence) | NM_124197.3 | |
Accession Version | NM_124197.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1140bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Aldolase-type TIM barrel family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Apr 18, 2007 this sequence version replaced NM_124197.2. |
1 | ATGGAAGCTG CACTGCTTTC TCTTCAGCCC TTCCCTTCCT CCGCCACTCA ACGACGTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_199633.1 |
CDS | 133..1272 |
Translation |
Target ORF information:
Target ORF information:
|
NM_124197.3 |
1 | ATGGAAGCTG CACTGCTTTC TCTTCAGCCC TTCCCTTCCT CCGCCACTCA ACGACGTCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb30268 | |
Clone ID Related Accession (Same CDS sequence) | NM_001203559.1 | |
Accession Version | NM_001203559.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1095bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Aldolase-type TIM barrel family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGATTCGAG AGTTGGTATC AATAGCTTTT CAGCTTCAGG AGTTTGGAAT CGATGTTAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001190488.1 |
CDS | 417..1511 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001203559.1 |
1 | ATGATTCGAG AGTTGGTATC AATAGCTTTT CAGCTTCAGG AGTTTGGAAT CGATGTTAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |