Gene Symbol | emb1138 |
Entrez Gene ID | 832713 |
Full Name | DEAD box RNA helicase (RH3) |
Synonyms | AtRH3,RH3,embryo defective 1138 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » emb1138 cDNA ORF clone
Gene Symbol | emb1138 |
Entrez Gene ID | 832713 |
Full Name | DEAD box RNA helicase (RH3) |
Synonyms | AtRH3,RH3,embryo defective 1138 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001203473.1 | NP_001190402.1 | DEAD box RNA helicase (RH3) |
NM_001036866.4 | NP_001031943.1 | DEAD box RNA helicase (RH3) |
NM_147920.4 | NP_680225.2 | DEAD box RNA helicase (RH3) |
DDX50 | XP_001111043.1 | |
Rattus norvegicus (Norway rat) | Ddx50 | NP_001013216.2 |
Pan troglodytes (chimpanzee) | DDX50 | XP_507824.2 |
Canis lupus familiaris (dog) | DDX50 | XP_850174.2 |
Mus musculus (house mouse) | Ddx50 | NP_444413.1 |
Arabidopsis thaliana (thale cress) | emb1138 | NP_001031943.1 |
Oryza sativa (rice) | Os03g0827700 | NP_001051773.1 |
Homo sapiens (human) | DDX50 | NP_076950.1 |
Bos taurus (cattle) | DDX50 | NP_001192982.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
RH3 is highly expressed in greening tissues of germinating seedlings, and chloroplasts in the rh3-4 mutant have fewer ribosomes, lower amounts of chlorophyll, and poorly developed thylakoids. rh3-4 seedlings displayed ABA-deficient phenotypes.
Title: Defective chloroplast development inhibits maintenance of normal levels of abscisic acid in a mutant of the Arabidopsis RH3 DEAD-box protein during early post-germination growth.
The function of chloroplast RH3 in maize (Zea mays; ZmRH3) and Arabidopsis (Arabidopsis thaliana; AtRH3) was determined.
Title: Chloroplast RH3 DEAD box RNA helicases in maize and Arabidopsis function in splicing of specific group II introns and affect chloroplast ribosome biogenesis.
The following emb1138 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the emb1138 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb29991 | |
Clone ID Related Accession (Same CDS sequence) | NM_001203473.1 | |
Accession Version | NM_001203473.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1968bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | DEAD box RNA helicase (RH3) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGACCTTGA CGGCGACAAC AACAACGTTG AAGCTGATGA TGGTGAAGAA CTCGCTATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001190402.1 |
CDS | 110..2077 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001203473.1 |
1 | ATGACCTTGA CGGCGACAAC AACAACGTTG AAGCTGATGA TGGTGAAGAA CTCGCTATCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb19600 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036866.4 | |
Accession Version | NM_001036866.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2247bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | DEAD box RNA helicase (RH3) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_001036866.3. |
1 | ATGGCGTCGA CGGTAGGAGT TCCATCACTA TACCAAGTTC CTCACCTTGA AATCTCCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001031943.1 |
CDS | 133..2379 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001036866.4 |
1 | ATGGCGTCGA CGGTAGGAGT TCCATCACTA TACCAAGTTC CTCACCTTGA AATCTCCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb19601 | |
Clone ID Related Accession (Same CDS sequence) | NM_147920.4 | |
Accession Version | NM_147920.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2244bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | DEAD box RNA helicase (RH3) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Apr 24, 2008 this sequence version replaced NM_147920.3. |
1 | ATGGCGTCGA CGGTAGGAGT TCCATCACTA TACCAAGTTC CTCACCTTGA AATCTCCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_680225.2 |
CDS | 133..2376 |
Translation |
Target ORF information:
Target ORF information:
|
NM_147920.4 |
1 | ATGGCGTCGA CGGTAGGAGT TCCATCACTA TACCAAGTTC CTCACCTTGA AATCTCCAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |