Gene Symbol | AT5G24740 |
Entrez Gene ID | 832543 |
Full Name | vacuolar protein sorting-associated protein, putative (DUF1162) |
Synonyms | SHBY,SHRUBBY,T4C12.10 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT5G24740 cDNA ORF clone
Gene Symbol | AT5G24740 |
Entrez Gene ID | 832543 |
Full Name | vacuolar protein sorting-associated protein, putative (DUF1162) |
Synonyms | SHBY,SHRUBBY,T4C12.10 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_122383.8 | NP_568451.7 | vacuolar protein sorting-associated protein, putative (DUF1162) |
NM_001343897.1 | NP_001331613.1 | vacuolar protein sorting-associated protein, putative (DUF1162) |
NM_001343898.1 | NP_001331615.1 | vacuolar protein sorting-associated protein, putative (DUF1162) |
NM_001343895.1 | NP_001331612.1 | vacuolar protein sorting-associated protein, putative (DUF1162) |
NM_001343894.1 | NP_001318641.1 | vacuolar protein sorting-associated protein, putative (DUF1162) |
NM_001343896.1 | NP_001331614.1 | vacuolar protein sorting-associated protein, putative (DUF1162) |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
SHRUBBY (At5g24740) controls root growth downstream of gibberellic acid in part through the regulation of SHORT-ROOT and SCARECROW.
Title: Identification of SHRUBBY, a SHORT-ROOT and SCARECROW interacting protein that controls root growth and radial patterning.
The following AT5G24740 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G24740 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb02544 | |
Clone ID Related Accession (Same CDS sequence) | NM_122383.8 | |
Accession Version | NM_122383.8 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 10395bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | vacuolar protein sorting-associated protein, putative (DUF1162) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On May 26, 2011 this sequence version replaced NM_122383.7. COMPLETENESS: incomplete on the 5' end. |
1 | ATGCTTGAAG GATATGTGCA AGGATTTGTG AACCTGTTGT TAGGGTACTT AGGTCGTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_568451.7 |
CDS | 1..10395 |
Translation |
Target ORF information:
Target ORF information:
|
NM_122383.8 |
1 | ATGCTTGAAG GATATGTGCA AGGATTTGTG AACCTGTTGT TAGGGTACTT AGGTCGTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb40320 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343894.1 | |
Accession Version | NM_001343894.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 10455bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | vacuolar protein sorting-associated protein, putative (DUF1162) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGCTTGAAG GATATGTGCA AGGATTTGTG AACCTGTTGT TAGGGTACTT AGGTCGTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001318641.1 |
CDS | 165..10619 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343894.1 |
1 | ATGCTTGAAG GATATGTGCA AGGATTTGTG AACCTGTTGT TAGGGTACTT AGGTCGTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb41192 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343897.1 | |
Accession Version | NM_001343897.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 10341bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | vacuolar protein sorting-associated protein, putative (DUF1162) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGCTTGAAG GATATGTGCA AGGATTTGTG AACCTGTTGT TAGGGTACTT AGGTCGTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001331613.1 |
CDS | 152..10492 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343897.1 |
1 | ATGCTTGAAG GATATGTGCA AGGATTTGTG AACCTGTTGT TAGGGTACTT AGGTCGTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb41193 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343896.1 | |
Accession Version | NM_001343896.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 10341bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | vacuolar protein sorting-associated protein, putative (DUF1162) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGCTTGAAG GATATGTGCA AGGATTTGTG AACCTGTTGT TAGGGTACTT AGGTCGTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001331614.1 |
CDS | 165..10505 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343896.1 |
1 | ATGCTTGAAG GATATGTGCA AGGATTTGTG AACCTGTTGT TAGGGTACTT AGGTCGTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb41194 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343895.1 | |
Accession Version | NM_001343895.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 10566bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | vacuolar protein sorting-associated protein, putative (DUF1162) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGCTTGAAG GATATGTGCA AGGATTTGTG AACCTGTTGT TAGGGTACTT AGGTCGTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001331612.1 |
CDS | 165..10730 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343895.1 |
1 | ATGCTTGAAG GATATGTGCA AGGATTTGTG AACCTGTTGT TAGGGTACTT AGGTCGTTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb41195 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343898.1 | |
Accession Version | NM_001343898.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 9912bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | vacuolar protein sorting-associated protein, putative (DUF1162) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGATGTCTC TGTTGAATAT CAGGCCATCA GTTGGTAGGG TGAGAGGGGG GCAAGTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001331615.1 |
CDS | 86..9997 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343898.1 |
1 | ATGATGTCTC TGTTGAATAT CAGGCCATCA GTTGGTAGGG TGAGAGGGGG GCAAGTGAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |