Gene Symbol | HD2C |
Entrez Gene ID | 831733 |
Full Name | histone deacetylase 2C |
Synonyms | F17C15.160,F17C15_160,HDT3,HISTONE DEACETYLASE 3,histone deacetylase 2C |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » HD2C cDNA ORF clone
Gene Symbol | HD2C |
Entrez Gene ID | 831733 |
Full Name | histone deacetylase 2C |
Synonyms | F17C15.160,F17C15_160,HDT3,HISTONE DEACETYLASE 3,histone deacetylase 2C |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_120455.4 | NP_195994.3 | histone deacetylase 2C |
Arabidopsis thaliana (thale cress) | HDA3 | NP_001190012.1 |
Arabidopsis thaliana (thale cress) | HD2C | NP_195994.3 |
Oryza sativa (rice) | Os05g0597100 | NP_001056523.1 |
Arabidopsis thaliana (thale cress) | HD2B | NP_851056.1 |
Oryza sativa (rice) | Os01g0909500 | NP_001045151.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
HD2C and BRM act in a common genetic pathway to regulate the Arabidopsis heat stress response.
Title: HD2C histone deacetylase and a SWI/SNF chromatin remodelling complex interact and both are involved in mediating the heat stress response in Arabidopsis.
HD2C functionally associates with HDA6 and regulates gene expression through histone modifications.
Title: HD2C interacts with HDA6 and is involved in ABA and salt stress response in Arabidopsis.
HD2A and HD2C may have different and opposing functions in germination with the glucose/HD2A pathway acting to restrain germination and the HD2C pathway acting to enhance germination.
Title: Role of HD2 genes in seed germination and early seedling growth in Arabidopsis.
AtHD2C can modulate abscisic acid and stress responses.
Title: Identification of AtHD2C as a novel regulator of abscisic acid responses in Arabidopsis.
The following HD2C gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HD2C cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb18798 | |
Clone ID Related Accession (Same CDS sequence) | NM_120455.4 | |
Accession Version | NM_120455.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 885bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | histone deacetylase 2C | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_120455.3. |
1 | ATGGAGTTCT GGGGTGTTGA AGTTAAGAAT GGCAAACCAC TTCACCTAGA TCCTGGGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_195994.3 |
CDS | 136..1020 |
Translation |
Target ORF information:
Target ORF information:
|
NM_120455.4 |
1 | ATGGAGTTCT GGGGTGTTGA AGTTAAGAAT GGCAAACCAC TTCACCTAGA TCCTGGGCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |