SRFR1 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene
Clones
gRNAs

Summary

Gene Symbol	SRFR1
Entrez Gene ID	829901
Full Name	Tetratricopeptide repeat (TPR)-like superfamily protein
Synonyms	F6G17.110,F6G17_110,SUPPRESSOR OF RPS4-RLD 1
Gene Type	protein-coding
Organism	Arabidopsis thaliana(thale cress)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001342443.1	NP_001329700.1	Tetratricopeptide repeat (TPR)-like superfamily protein
NM_119910.4	NP_195462.3	Tetratricopeptide repeat (TPR)-like superfamily protein

Pathways from BioSystems

Homologies

Homo sapiens (human)	TTC13	NP_078801.3
	TTC13	XP_001107062.1
Danio rerio (zebrafish)	ttc13	NP_001124099.1
Oryza sativa (rice)	Os07g0113700	NP_001058749.1
Rattus norvegicus (Norway rat)	Ttc13	NP_001129634.1
Pan troglodytes (chimpanzee)	TTC13	XP_001149480.1
Canis lupus familiaris (dog)	TTC13	XP_546094.2
Bos taurus (cattle)	TTC13	NP_001192789.1
Mus musculus (house mouse)	Ttc13	NP_663582.2
Arabidopsis thaliana (thale cress)	SRFR1	NP_195462.3
Xenopus tropicalis (tropical clawed frog)	ttc13	XP_004914718.1
Gallus gallus (chicken)	TTC13	XP_004935553.1

Gene Ontology
Bibliography

Related articles in PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

This finding suggests a novel form of resistance in Arabidopsis to the biotrophic pathogen H. schachtii or a root-specific regulation of the salicylic acid pathway by EDS1, and places SRFR1 at an intersection between multiple defence pathways.
Title: The Arabidopsis immune regulator SRFR1 dampens defences against herbivory by Spodoptera exigua and parasitism by Heterodera schachtii.

SRFR1 has a role in regulating effector-triggered immunity via transcriptional control.
Title: The Arabidopsis immune adaptor SRFR1 interacts with TCP transcription factors that redundantly contribute to effector-triggered immunity.

study shows EDS1 forms complexes with the TIR-NB-LRR resistance proteins RPS4 and RPS6 and the negative immune regulator SRFR1 at a cytoplasmic membrane
Title: Pathogen effectors target Arabidopsis EDS1 and alter its interactions with immune regulators.

Mutations in SRFR1 activates SNC1 and contributes to resistance to the bacterial effector AvrRps4.
Title: The Arabidopsis resistance-like gene SNC1 is activated by mutations in SRFR1 and contributes to resistance to the bacterial effector AvrRps4.

Mutations in SRFR1 also enhanced HopA1-triggered immunity in rps6 mutants.
Title: Resistance to the Pseudomonas syringae effector HopA1 is governed by the TIR-NBS-LRR protein RPS6 and is enhanced by mutations in SRFR1.

The following SRFR1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SRFR1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAb40122	NM_001342443.1 Latest version!	Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein (SRFR1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$510.30 $729.00
OAb17339	NM_119910.4 Latest version!	Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein (SRFR1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	20	$629.30 $899.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

SRFR1 ( NM_001342443.1 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_001329700.1 Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein (SRFR1), mRNA.

Price & Availability↑

CloneID	OAb40122
Clone ID Related Accession (Same CDS sequence)	NM_001342443.1
Accession Version	NM_001342443.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2685bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	Tetratricopeptide repeat (TPR)-like superfamily protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075).

ATGGCGACGG CGACGGCGAC ATCGGAACGA TTCGAGTTAG CCAAGCACTG CAGTTCACGG 
AACTGGTCTA AAGCGATCCG AGTTCTCGAT TCGCTCCTTG CTAAGGAGTC TTCAATTTTG 
GATATATGCA ATAGAGCGTT TTGTTATAAT CAATTGGAGC TTCACAAGCA TGTGATTAAG 
GACTGTGACA AGGCACTTCT GCTTGAACCT TTTGCCATTC AAGCTTTTAT TCTCAAAGGA 
CGCGCTCTTT TGGCTTTGGG GAGAAAACAG GAAGCTGTTC TTGTTTTGGA GCAAGGGTAT 
AAAAGTGCGT TGCAGCAGAC AGCAGATGTG AAGCAGTTAC TTGAATTAGA AGAACTCTTA 
AAAGATGCAA GACGAGAAAT TGATGGGATT TTAAAAAGTC ATGCCACCGA GTCTCCGCAA 
GAGACCCCTG CCTATCATAG TGAGAAGTCT GATGAAAAAA GTGACAAGCT GGACAACCAT 
GAATCAGGAG CAAGTAGCAA TGGGAACTCA CATGAGTCAT CTAGCGAATT GGGCGAGCAA 
TCAAAGATAG TAAGCTTTTC AAAAGTTGCA TCCAAGGCTA GCAAGCAATC TGATGGTAAT 
TCCGACTTAT GTAACGGATC AGTGTACAAG GAAAAAGAGA ATGGAAAGTG TGGCAGCCAA 
ATCAATGGTT ATTATGAATC ATGTAAACCT TGTAATGGTT CTGATTTGCA TGATAATTTA 
GCTGAAAGTT CCGATCGGTT CGGGGAGCTA TCGATTAATG GAAACAAGAT AAGTATTAAG 
TCTAGCAAAA TGAGCCATAA AGCTGAGGCA CGTTGCGGAA TTAGTGATGA ATCCAGGAAA 
AATAAGAAGT ACACCATAGC AAGAATATCG GGAACCCATT CCATAAGTGT GGATTTTCGA 
CTTTCTAGAG GCATTGCACA GGTGAATGAA GGAAACTATA CGAAAGCTAT TTCTATTTTT 
GATAAGGTGC TGAAAGAAGA ACCAACTTAC CCTGAGGCAC TTATAGGAAG AGGGACAGCT 
TATGCATTCC AACGAGAGCT TGAAAGTGCT ATAGCTGATT TTACTAAGGC TATCCAATCT 
AACCCAGCAG CAAGTGAGGC CTGGAAGCGG AGAGGACAGG CTCGTGCTGC TCTTGGGGAA 
TATGTTGAGG CGGTTGAAGA TTTGACTAAA GCACTTGTTT TTGAGCCAAA CTCACCTGAT 
GTATTGCACG AAAGGGGTAT TGTTAATTTC AAATCTAAGG ACTTCACTGC TGCTGTGAAG 
GACCTATCTA TATGTCTGAA GCAAGAGAAA GATAACAAGT CTGCATACAC TTATTTGGGA 
CTAGCATTTG CTTCTCTTGG TGAATACAAA AAAGCTGAAG AGGCGCATTT AAAGTCCATC 
CAATTGGATA GTAATTATCT TGAAGCATGG CTTCATCTCG CCCAGTTCTA TCAAGAGTTG 
GCCGACCACT GCAAGGCTTT GGAATGCATT GAGCAGGTTC TACAAGTCGA CAACAGGGTT 
TGGAAGGCCT ATCACTTGCG TGGATTAGTG TTCCATGGAT TAGGCGAACA CAGGAAGGCT 
ATCCAAGAAT TATCTATTGG CTTGAGCATT GAGAACACAA TAGAGTGCTT GTACCTACGA 
GGTTCCTGCT ATCACGCCGT AGGAGAGTAT AGAGATGCGG TGAAGGACTA TGATGCAACA 
GTTGACGTGG AACTTGATGC AGTGGAGAAA TTTGTTCTTC AATGCTTGGC GTTTTATCAG 
AAGGAGCTTG CCTTGTATAC AGCTTCCAAA GTTAGTAGTG AGTTTTTATG CTTTGATATT 
GATGGTGACA TAGACCCAAT GTTCAAGGAG TACTGGTGCA AAAGATTACA CCCAAAAAAT 
GTATGTGAAA AGGTTTACAG ACAACCTCCC CTACGTGAAT CACTTAAGAA GGGTAAACTG 
AAAAAGCAAG ATCTTGCAAT AACCAAACAG AAGGCGAATA TTCTTCGTTT TGCTGATTTA 
ATAGGCAAGA GGATCCAATA TGATTGTCCT GGATTCTTAC CAAACAAACG CCAGCACCGT 
ATGGCAGGAT TAGCTGTGAT AGAGATTGCT CAAAAAGTTT CCAAAGCTTG GCGCATAGAG 
TGGAGGAATT CAACCAAAGG CACTACAAAA AATGGAAAGA AAAACCGGAG GAGAGAGAGA 
ACCAACATTC TTAGCCAGAA TAGAGGTGGT GCTGGGTGTA GTAGTAGCAG TTTCAGTGAA 
ACTTCAACTG GATATGCCTC ACTAGAAGAT AGATCATCAG GCCGCTCTAT CTTGTCTTGG 
CAAGACGTTT ATTCCCCTGC TGTCAGATGG AGACAAATTT CAGAGCCTTG TGACCCAGTG 
GTGTGGGTTA ACAAACTAAG TGAAGAGTTT AATTCTGGGT TTGGTTCTCA TACACCAATG 
GTACTCGGTC AAGCTAAAGT AGTACGCTAT TTCCCAAATT ATGAAAGAAC CCTGACTCTT 
GCAAAGAGCA TCATCAAGGA TAAACTCTCT GTACGCAGCA AGAAAGATAA AGTTATTGAT 
CTTTCTAAAG ATGAGAAGAT CGAAAAAATA ATGCGTGCTG AAACGTGTGA TGAGCTACAC 
AATATTGTTG GTGAGGATTT CTGGGTGGCT ACTTGGTGCG ACAGTACCGG ATCTGAAGGG 
AAACGCCTCG AAGGAACTAG AATCACCTGC ATTCAAAAAC CGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001329700.1
CDS	413..3097
Translation	MATATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCDKALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDARREIDGILKSHATESPQETPAYHSEKSDEKSDKLDNHESGASSNGNSHESSSELGEQSKIVSFSKVASKASKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSINGNKISIKSSKMSHKAEARCGISDESRKNKKYTIARISGTHSISVDFRLSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQSNPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVKDLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQELADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIGLSIENTIECLYLRGSCYHAVGEYRDAVKDYDATVDVELDAVEKFVLQCLAFYQKELALYTASKVSSEFLCFDIDGDIDPMFKEYWCKRLHPKNVCEKVYRQPPLRESLKKGKLKKQDLAITKQKANILRFADLIGKRIQYDCPGFLPNKRQHRMAGLAVIEIAQKVSKAWRIEWRNSTKGTTKNGKKNRRRERTNILSQNRGGAGCSSSSFSETSTGYASLEDRSSGRSILSWQDVYSPAVRWRQISEPCDPVVWVNKLSEEFNSGFGSHTPMVLGQAKVVRYFPNYERTLTLAKSIIKDKLSVRSKKDKVIDLSKDEKIEKIMRAETCDELHNIVGEDFWVATWCDSTGSEGKRLEGTRITCIQKP

Target ORF information:

RefSeq Version	NM_001342443.1
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein (SRFR1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001342443.1

ORF Insert Sequence:

ATGGCGACGG CGACGGCGAC ATCGGAACGA TTCGAGTTAG CCAAGCACTG CAGTTCACGG 
AACTGGTCTA AAGCGATCCG AGTTCTCGAT TCGCTCCTTG CTAAGGAGTC TTCAATTTTG 
GATATATGCA ATAGAGCGTT TTGTTATAAT CAATTGGAGC TTCACAAGCA TGTGATTAAG 
GACTGTGACA AGGCACTTCT GCTTGAACCT TTTGCCATTC AAGCTTTTAT TCTCAAAGGA 
CGCGCTCTTT TGGCTTTGGG GAGAAAACAG GAAGCTGTTC TTGTTTTGGA GCAAGGGTAT 
AAAAGTGCGT TGCAGCAGAC AGCAGATGTG AAGCAGTTAC TTGAATTAGA AGAACTCTTA 
AAAGATGCAA GACGAGAAAT TGATGGGATT TTAAAAAGTC ATGCCACCGA GTCTCCGCAA 
GAGACCCCTG CCTATCATAG TGAGAAGTCT GATGAAAAAA GTGACAAGCT GGACAACCAT 
GAATCAGGAG CAAGTAGCAA TGGGAACTCA CATGAGTCAT CTAGCGAATT GGGCGAGCAA 
TCAAAGATAG TAAGCTTTTC AAAAGTTGCA TCCAAGGCTA GCAAGCAATC TGATGGTAAT 
TCCGACTTAT GTAACGGATC AGTGTACAAG GAAAAAGAGA ATGGAAAGTG TGGCAGCCAA 
ATCAATGGTT ATTATGAATC ATGTAAACCT TGTAATGGTT CTGATTTGCA TGATAATTTA 
GCTGAAAGTT CCGATCGGTT CGGGGAGCTA TCGATTAATG GAAACAAGAT AAGTATTAAG 
TCTAGCAAAA TGAGCCATAA AGCTGAGGCA CGTTGCGGAA TTAGTGATGA ATCCAGGAAA 
AATAAGAAGT ACACCATAGC AAGAATATCG GGAACCCATT CCATAAGTGT GGATTTTCGA 
CTTTCTAGAG GCATTGCACA GGTGAATGAA GGAAACTATA CGAAAGCTAT TTCTATTTTT 
GATAAGGTGC TGAAAGAAGA ACCAACTTAC CCTGAGGCAC TTATAGGAAG AGGGACAGCT 
TATGCATTCC AACGAGAGCT TGAAAGTGCT ATAGCTGATT TTACTAAGGC TATCCAATCT 
AACCCAGCAG CAAGTGAGGC CTGGAAGCGG AGAGGACAGG CTCGTGCTGC TCTTGGGGAA 
TATGTTGAGG CGGTTGAAGA TTTGACTAAA GCACTTGTTT TTGAGCCAAA CTCACCTGAT 
GTATTGCACG AAAGGGGTAT TGTTAATTTC AAATCTAAGG ACTTCACTGC TGCTGTGAAG 
GACCTATCTA TATGTCTGAA GCAAGAGAAA GATAACAAGT CTGCATACAC TTATTTGGGA 
CTAGCATTTG CTTCTCTTGG TGAATACAAA AAAGCTGAAG AGGCGCATTT AAAGTCCATC 
CAATTGGATA GTAATTATCT TGAAGCATGG CTTCATCTCG CCCAGTTCTA TCAAGAGTTG 
GCCGACCACT GCAAGGCTTT GGAATGCATT GAGCAGGTTC TACAAGTCGA CAACAGGGTT 
TGGAAGGCCT ATCACTTGCG TGGATTAGTG TTCCATGGAT TAGGCGAACA CAGGAAGGCT 
ATCCAAGAAT TATCTATTGG CTTGAGCATT GAGAACACAA TAGAGTGCTT GTACCTACGA 
GGTTCCTGCT ATCACGCCGT AGGAGAGTAT AGAGATGCGG TGAAGGACTA TGATGCAACA 
GTTGACGTGG AACTTGATGC AGTGGAGAAA TTTGTTCTTC AATGCTTGGC GTTTTATCAG 
AAGGAGCTTG CCTTGTATAC AGCTTCCAAA GTTAGTAGTG AGTTTTTATG CTTTGATATT 
GATGGTGACA TAGACCCAAT GTTCAAGGAG TACTGGTGCA AAAGATTACA CCCAAAAAAT 
GTATGTGAAA AGGTTTACAG ACAACCTCCC CTACGTGAAT CACTTAAGAA GGGTAAACTG 
AAAAAGCAAG ATCTTGCAAT AACCAAACAG AAGGCGAATA TTCTTCGTTT TGCTGATTTA 
ATAGGCAAGA GGATCCAATA TGATTGTCCT GGATTCTTAC CAAACAAACG CCAGCACCGT 
ATGGCAGGAT TAGCTGTGAT AGAGATTGCT CAAAAAGTTT CCAAAGCTTG GCGCATAGAG 
TGGAGGAATT CAACCAAAGG CACTACAAAA AATGGAAAGA AAAACCGGAG GAGAGAGAGA 
ACCAACATTC TTAGCCAGAA TAGAGGTGGT GCTGGGTGTA GTAGTAGCAG TTTCAGTGAA 
ACTTCAACTG GATATGCCTC ACTAGAAGAT AGATCATCAG GCCGCTCTAT CTTGTCTTGG 
CAAGACGTTT ATTCCCCTGC TGTCAGATGG AGACAAATTT CAGAGCCTTG TGACCCAGTG 
GTGTGGGTTA ACAAACTAAG TGAAGAGTTT AATTCTGGGT TTGGTTCTCA TACACCAATG 
GTACTCGGTC AAGCTAAAGT AGTACGCTAT TTCCCAAATT ATGAAAGAAC CCTGACTCTT 
GCAAAGAGCA TCATCAAGGA TAAACTCTCT GTACGCAGCA AGAAAGATAA AGTTATTGAT 
CTTTCTAAAG ATGAGAAGAT CGAAAAAATA ATGCGTGCTG AAACGTGTGA TGAGCTACAC 
AATATTGTTG GTGAGGATTT CTGGGTGGCT ACTTGGTGCG ACAGTACCGG ATCTGAAGGG 
AAACGCCTCG AAGGAACTAG AATCACCTGC ATTCAAAAAC CGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

SRFR1 ( NM_119910.4 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_195462.3 Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein (SRFR1), mRNA.

Price & Availability↑

CloneID	OAb17339
Clone ID Related Accession (Same CDS sequence)	NM_119910.4
Accession Version	NM_119910.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3159bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	Tetratricopeptide repeat (TPR)-like superfamily protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_119910.3.

ATGGCGACGG CGACGGCGAC ATCGGAACGA TTCGAGTTAG CCAAGCACTG CAGTTCACGG 
AACTGGTCTA AAGCGATCCG AGTTCTCGAT TCGCTCCTTG CTAAGGAGTC TTCAATTTTG 
GATATATGCA ATAGAGCGTT TTGTTATAAT CAATTGGAGC TTCACAAGCA TGTGATTAAG 
GACTGTGACA AGGCACTTCT GCTTGAACCT TTTGCCATTC AAGCTTTTAT TCTCAAAGGA 
CGCGCTCTTT TGGCTTTGGG GAGAAAACAG GAAGCTGTTC TTGTTTTGGA GCAAGGGTAT 
AAAAGTGCGT TGCAGCAGAC AGCAGATGTG AAGCAGTTAC TTGAATTAGA AGAACTCTTA 
AAAGATGCAA GACGAGAAAT TGATGGGATT TTAAAAAGTC ATGCCACCGA GTCTCCGCAA 
GAGACCCCTG CCTATCATAG TGAGAAGTCT GATGAAAAAA GTGACAAGCT GGACAACCAT 
GAATCAGGAG CAAGTAGCAA TGGGAACTCA CATGAGTCAT CTAGCGAATT GGGCGAGCAA 
TCAAAGATAG TAAGCTTTTC AAAAGTTGCA TCCAAGGCTA GCAAGCAATC TGATGGTAAT 
TCCGACTTAT GTAACGGATC AGTGTACAAG GAAAAAGAGA ATGGAAAGTG TGGCAGCCAA 
ATCAATGGTT ATTATGAATC ATGTAAACCT TGTAATGGTT CTGATTTGCA TGATAATTTA 
GCTGAAAGTT CCGATCGGTT CGGGGAGCTA TCGATTAATG GAAACAAGAT AAGTATTAAG 
TCTAGCAAAA TGAGCCATAA AGCTGAGGCA CGTTGCGGAA TTAGTGATGA ATCCAGGAAA 
AATAAGAAGT ACACCATAGC AAGAATATCG GGAACCCATT CCATAAGTGT GGATTTTCGA 
CTTTCTAGAG GCATTGCACA GGTGAATGAA GGAAACTATA CGAAAGCTAT TTCTATTTTT 
GATAAGGTGC TGAAAGAAGA ACCAACTTAC CCTGAGGCAC TTATAGGAAG AGGGACAGCT 
TATGCATTCC AACGAGAGCT TGAAAGTGCT ATAGCTGATT TTACTAAGGC TATCCAATCT 
AACCCAGCAG CAAGTGAGGC CTGGAAGCGG AGAGGACAGG CTCGTGCTGC TCTTGGGGAA 
TATGTTGAGG CGGTTGAAGA TTTGACTAAA GCACTTGTTT TTGAGCCAAA CTCACCTGAT 
GTATTGCACG AAAGGGGTAT TGTTAATTTC AAATCTAAGG ACTTCACTGC TGCTGTGAAG 
GACCTATCTA TATGTCTGAA GCAAGAGAAA GATAACAAGT CTGCATACAC TTATTTGGGA 
CTAGCATTTG CTTCTCTTGG TGAATACAAA AAAGCTGAAG AGGCGCATTT AAAGTCCATC 
CAATTGGATA GTAATTATCT TGAAGCATGG CTTCATCTCG CCCAGTTCTA TCAAGAGTTG 
GCCGACCACT GCAAGGCTTT GGAATGCATT GAGCAGGTTC TACAAGTCGA CAACAGGGTT 
TGGAAGGCCT ATCACTTGCG TGGATTAGTG TTCCATGGAT TAGGCGAACA CAGGAAGGCT 
ATCCAAGAAT TATCTATTGG CTTGAGCATT GAGAACACAA TAGAGTGCTT GTACCTACGA 
GGTTCCTGCT ATCACGCCGT AGGAGAGTAT AGAGATGCGG TGAAGGACTA TGATGCAACA 
GTTGACGTGG AACTTGATGC AGTGGAGAAA TTTGTTCTTC AATGCTTGGC GTTTTATCAG 
AAGGAGCTTG CCTTGTATAC AGCTTCCAAA GTTAGTAGTG AGTTTTTATG CTTTGATATT 
GATGGTGACA TAGACCCAAT GTTCAAGGAG TACTGGTGCA AAAGATTACA CCCAAAAAAT 
GTATGTGAAA AGGTTTACAG ACAACCTCCC CTACGTGAAT CACTTAAGAA GGGTAAACTG 
AAAAAGCAAG ATCTTGCAAT AACCAAACAG AAGGCGAATA TTCTTCGTTT TGCTGATTTA 
ATAGGCAAGA GGATCCAATA TGATTGTCCT GGATTCTTAC CAAACAAACG CCAGCACCGT 
ATGGCAGGAT TAGCTGTGAT AGAGATTGCT CAAAAAGTTT CCAAAGCTTG GCGCATAGAG 
TGGAGGAATT CAACCAAAGG CACTACAAAA AATGGAAAGA AAAACCGGAG GAGAGAGAGA 
ACCAACATTC TTAGCCAGAA TAGAGGTGGT GCTGGGTGTA GTAGTAGCAG TTTCAGTGAA 
ACTTCAACTG GATATGCCTC ACTAGAAGAT AGATCATCAG GCCGCTCTAT CTTGTCTTGG 
CAAGACGTTT ATTCCCCTGC TGTCAGATGG AGACAAATTT CAGAGCCTTG TGACCCAGTG 
GTGTGGGTTA ACAAACTAAG TGAAGAGTTT AATTCTGGGT TTGGTTCTCA TACACCAATG 
GTACTCGGTC AAGCTAAAGT AGTACGCTAT TTCCCAAATT ATGAAAGAAC CCTGACTCTT 
GCAAAGAGCA TCATCAAGGA TAAACTCTCT GTACGCAGCA AGAAAGATAA AGTTATTGAT 
CTTTCTAAAG ATGAGAAGAT CGAAAAAATA ATGCGTGCTG AAACGTGTGA TGAGCTACAC 
AATATTGTTG GTGAGGATTT CTGGGTGGCT ACTTGGTGCG ACAGTACCGG ATCTGAAGGG 
AAACGCCTCG AAGGAACTAG AATCACCTGC ATTCAAAAAC CGGGAAGGCT GGGGTATGAT 
TTTTCAATTC GAACTCCATG TACACCTGCA AGGTGGAGCG ACTTTGATGA AGAAATGACC 
TCAGCTTGGG AGGCTTTATG CACTGCCTAT TGTGGAGAGA ACTATGGTTC TACTGAGCTC 
GACGCTTTAG AAACCGTTAG AGACGCCATC TTACGCATGA CATATTACTG GTACAATTTT 
ATGCCATTAG CTCGAGGAAC TGCTGTAACA GGATTTGTAG TGTTACTTGG ACTTCTGCTT 
GCTGCTAATA TGGAGTTCAC TGAGACTATC CCGAAAGGGT TACAGATCGA TTGGGAAGCT 
ATACTTAATG TCGAACCGGG TTCCTTTGTT GATTCGGTTA AGTCTTGGTT ATACCCGTCC 
CTGAAAATCA ATACGTCGTG GAGAGACCAT ACGGAAATTT CCTCGGCTTT TTCGACAACA 
GGAGCGGTTG TTGCTGCGCT TAGCACTTAC AACGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_195462.3
CDS	413..3571
Translation	MATATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCDKALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDARREIDGILKSHATESPQETPAYHSEKSDEKSDKLDNHESGASSNGNSHESSSELGEQSKIVSFSKVASKASKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSINGNKISIKSSKMSHKAEARCGISDESRKNKKYTIARISGTHSISVDFRLSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQSNPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVKDLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQELADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIGLSIENTIECLYLRGSCYHAVGEYRDAVKDYDATVDVELDAVEKFVLQCLAFYQKELALYTASKVSSEFLCFDIDGDIDPMFKEYWCKRLHPKNVCEKVYRQPPLRESLKKGKLKKQDLAITKQKANILRFADLIGKRIQYDCPGFLPNKRQHRMAGLAVIEIAQKVSKAWRIEWRNSTKGTTKNGKKNRRRERTNILSQNRGGAGCSSSSFSETSTGYASLEDRSSGRSILSWQDVYSPAVRWRQISEPCDPVVWVNKLSEEFNSGFGSHTPMVLGQAKVVRYFPNYERTLTLAKSIIKDKLSVRSKKDKVIDLSKDEKIEKIMRAETCDELHNIVGEDFWVATWCDSTGSEGKRLEGTRITCIQKPGRLGYDFSIRTPCTPARWSDFDEEMTSAWEALCTAYCGENYGSTELDALETVRDAILRMTYYWYNFMPLARGTAVTGFVVLLGLLLAANMEFTETIPKGLQIDWEAILNVEPGSFVDSVKSWLYPSLKINTSWRDHTEISSAFSTTGAVVAALSTYND

Target ORF information:

RefSeq Version	NM_119910.4
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like superfamily protein (SRFR1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_119910.4

ORF Insert Sequence:

ATGGCGACGG CGACGGCGAC ATCGGAACGA TTCGAGTTAG CCAAGCACTG CAGTTCACGG 
AACTGGTCTA AAGCGATCCG AGTTCTCGAT TCGCTCCTTG CTAAGGAGTC TTCAATTTTG 
GATATATGCA ATAGAGCGTT TTGTTATAAT CAATTGGAGC TTCACAAGCA TGTGATTAAG 
GACTGTGACA AGGCACTTCT GCTTGAACCT TTTGCCATTC AAGCTTTTAT TCTCAAAGGA 
CGCGCTCTTT TGGCTTTGGG GAGAAAACAG GAAGCTGTTC TTGTTTTGGA GCAAGGGTAT 
AAAAGTGCGT TGCAGCAGAC AGCAGATGTG AAGCAGTTAC TTGAATTAGA AGAACTCTTA 
AAAGATGCAA GACGAGAAAT TGATGGGATT TTAAAAAGTC ATGCCACCGA GTCTCCGCAA 
GAGACCCCTG CCTATCATAG TGAGAAGTCT GATGAAAAAA GTGACAAGCT GGACAACCAT 
GAATCAGGAG CAAGTAGCAA TGGGAACTCA CATGAGTCAT CTAGCGAATT GGGCGAGCAA 
TCAAAGATAG TAAGCTTTTC AAAAGTTGCA TCCAAGGCTA GCAAGCAATC TGATGGTAAT 
TCCGACTTAT GTAACGGATC AGTGTACAAG GAAAAAGAGA ATGGAAAGTG TGGCAGCCAA 
ATCAATGGTT ATTATGAATC ATGTAAACCT TGTAATGGTT CTGATTTGCA TGATAATTTA 
GCTGAAAGTT CCGATCGGTT CGGGGAGCTA TCGATTAATG GAAACAAGAT AAGTATTAAG 
TCTAGCAAAA TGAGCCATAA AGCTGAGGCA CGTTGCGGAA TTAGTGATGA ATCCAGGAAA 
AATAAGAAGT ACACCATAGC AAGAATATCG GGAACCCATT CCATAAGTGT GGATTTTCGA 
CTTTCTAGAG GCATTGCACA GGTGAATGAA GGAAACTATA CGAAAGCTAT TTCTATTTTT 
GATAAGGTGC TGAAAGAAGA ACCAACTTAC CCTGAGGCAC TTATAGGAAG AGGGACAGCT 
TATGCATTCC AACGAGAGCT TGAAAGTGCT ATAGCTGATT TTACTAAGGC TATCCAATCT 
AACCCAGCAG CAAGTGAGGC CTGGAAGCGG AGAGGACAGG CTCGTGCTGC TCTTGGGGAA 
TATGTTGAGG CGGTTGAAGA TTTGACTAAA GCACTTGTTT TTGAGCCAAA CTCACCTGAT 
GTATTGCACG AAAGGGGTAT TGTTAATTTC AAATCTAAGG ACTTCACTGC TGCTGTGAAG 
GACCTATCTA TATGTCTGAA GCAAGAGAAA GATAACAAGT CTGCATACAC TTATTTGGGA 
CTAGCATTTG CTTCTCTTGG TGAATACAAA AAAGCTGAAG AGGCGCATTT AAAGTCCATC 
CAATTGGATA GTAATTATCT TGAAGCATGG CTTCATCTCG CCCAGTTCTA TCAAGAGTTG 
GCCGACCACT GCAAGGCTTT GGAATGCATT GAGCAGGTTC TACAAGTCGA CAACAGGGTT 
TGGAAGGCCT ATCACTTGCG TGGATTAGTG TTCCATGGAT TAGGCGAACA CAGGAAGGCT 
ATCCAAGAAT TATCTATTGG CTTGAGCATT GAGAACACAA TAGAGTGCTT GTACCTACGA 
GGTTCCTGCT ATCACGCCGT AGGAGAGTAT AGAGATGCGG TGAAGGACTA TGATGCAACA 
GTTGACGTGG AACTTGATGC AGTGGAGAAA TTTGTTCTTC AATGCTTGGC GTTTTATCAG 
AAGGAGCTTG CCTTGTATAC AGCTTCCAAA GTTAGTAGTG AGTTTTTATG CTTTGATATT 
GATGGTGACA TAGACCCAAT GTTCAAGGAG TACTGGTGCA AAAGATTACA CCCAAAAAAT 
GTATGTGAAA AGGTTTACAG ACAACCTCCC CTACGTGAAT CACTTAAGAA GGGTAAACTG 
AAAAAGCAAG ATCTTGCAAT AACCAAACAG AAGGCGAATA TTCTTCGTTT TGCTGATTTA 
ATAGGCAAGA GGATCCAATA TGATTGTCCT GGATTCTTAC CAAACAAACG CCAGCACCGT 
ATGGCAGGAT TAGCTGTGAT AGAGATTGCT CAAAAAGTTT CCAAAGCTTG GCGCATAGAG 
TGGAGGAATT CAACCAAAGG CACTACAAAA AATGGAAAGA AAAACCGGAG GAGAGAGAGA 
ACCAACATTC TTAGCCAGAA TAGAGGTGGT GCTGGGTGTA GTAGTAGCAG TTTCAGTGAA 
ACTTCAACTG GATATGCCTC ACTAGAAGAT AGATCATCAG GCCGCTCTAT CTTGTCTTGG 
CAAGACGTTT ATTCCCCTGC TGTCAGATGG AGACAAATTT CAGAGCCTTG TGACCCAGTG 
GTGTGGGTTA ACAAACTAAG TGAAGAGTTT AATTCTGGGT TTGGTTCTCA TACACCAATG 
GTACTCGGTC AAGCTAAAGT AGTACGCTAT TTCCCAAATT ATGAAAGAAC CCTGACTCTT 
GCAAAGAGCA TCATCAAGGA TAAACTCTCT GTACGCAGCA AGAAAGATAA AGTTATTGAT 
CTTTCTAAAG ATGAGAAGAT CGAAAAAATA ATGCGTGCTG AAACGTGTGA TGAGCTACAC 
AATATTGTTG GTGAGGATTT CTGGGTGGCT ACTTGGTGCG ACAGTACCGG ATCTGAAGGG 
AAACGCCTCG AAGGAACTAG AATCACCTGC ATTCAAAAAC CGGGAAGGCT GGGGTATGAT 
TTTTCAATTC GAACTCCATG TACACCTGCA AGGTGGAGCG ACTTTGATGA AGAAATGACC 
TCAGCTTGGG AGGCTTTATG CACTGCCTAT TGTGGAGAGA ACTATGGTTC TACTGAGCTC 
GACGCTTTAG AAACCGTTAG AGACGCCATC TTACGCATGA CATATTACTG GTACAATTTT 
ATGCCATTAG CTCGAGGAAC TGCTGTAACA GGATTTGTAG TGTTACTTGG ACTTCTGCTT 
GCTGCTAATA TGGAGTTCAC TGAGACTATC CCGAAAGGGT TACAGATCGA TTGGGAAGCT 
ATACTTAATG TCGAACCGGG TTCCTTTGTT GATTCGGTTA AGTCTTGGTT ATACCCGTCC 
CTGAAAATCA ATACGTCGTG GAGAGACCAT ACGGAAATTT CCTCGGCTTT TTCGACAACA 
GGAGCGGTTG TTGCTGCGCT TAGCACTTAC AACGATTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Nature402(6763)769-77(1999 Dec)
Mayer K,Sch?ller C,Wambutt R,Murphy G,Volckaert G,Pohl T,D?sterh?ft A,Stiekema W,Entian KD,Terryn N,Harris B,Ansorge W,Brandt P,Grivell L,Rieger M,Weichselgartner M,de Simone V,Obermaier B,Mache R,M?ller M,Kreis M,Delseny M,Puigdomenech P,Watson M,Schmidtheini T,Reichert B,Portatelle D,Perez-Alonso M,Boutry M,Bancroft I,Vos P,Hoheisel J,Zimmermann W,Wedler H,Ridley P,Langham SA,McCullagh B,Bilham L,Robben J,Van der Schueren J,Grymonprez B,Chuang YJ,Vandenbussche F,Braeken M,Weltjens I,Voet M,Bastiaens I,Aert R,Defoor E,Weitzenegger T,Bothe G,Ramsperger U,Hilbert H,Braun M,Holzer E,Brandt A,Peters S,van Staveren M,Dirske W,Mooijman P,Klein Lankhorst R,Rose M,Hauf J,K?tter P,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Van den Daele H,De Keyser A,Buysshaert C,Gielen J,Villarroel R,De Clercq R,Van Montagu M,Rogers J,Cronin A,Quail M,Bray-Allen S,Clark L,Doggett J,Hall S,Kay M,Lennard N,McLay K,Mayes R,Pettett A,Rajandream MA,Lyne M,Benes V,Rechmann S,Borkova D,Bl?cker H,Scharfe M,Grimm M,L?hnert TH,Dose S,de Haan M,Maarse A,Sch?fer M,M?ller-Auer S,Gabel C,Fuchs M,Fartmann B,Granderath K,Dauner D,Herzl A,Neumann S,Argiriou A,Vitale D,Liguori R,Piravandi E,Massenet O,Quigley F,Clabauld G,M?ndlein A,Felber R,Schnabl S,Hiller R,Schmidt W,Lecharny A,Aubourg S,Chefdor F,Cooke R,Berger C,Montfort A,Casacuberta E,Gibbons T,Weber N,Vandenbol M,Bargues M,Terol J,Torres A,Perez-Perez A,Purnelle B,Bent E,Johnson S,Tacon D,Jesse T,Heijnen L,Schwarz S,Scholler P,Heber S,Francs P,Bielke C,Frishman D,Haase D,Lemcke K,Mewes HW,Stocker S,Zaccaria P,Bevan M,Wilson RK,de la Bastide M,Habermann K,Parnell L,Dedhia N,Gnoj L,Schutz K,Huang E,Spiegel L,Sehkon M,Murray J,Sheet P,Cordes M,Abu-Threideh J,Stoneking T,Kalicki J,Graves T,Harmon G,Edwards J,Latreille P,Courtney L,Cloud J,Abbott A,Scott K,Johnson D,Minx P,Bentley D,Fulton B,Miller N,Greco T,Kemp K,Kramer J,Fulton L,Mardis E,Dante M,Pepin K,Hillier L,Nelson J,Spieth J,Ryan E,Andrews S,Geisel C,Layman D,Du H,Ali J,Berghoff A,Jones K,Drone K,Cotton M,Joshu C,Antonoiu B,Zidanic M,Strong C,Sun H,Lamar B,Yordan C,Ma P,Zhong J,Preston R,Vil D,Shekher M,Matero A,Shah R,Swaby IK,O'Shaughnessy A,Rodriguez M,Hoffmann J,Till S,Granat S,Shohdy N,Hasegawa A,Hameed A,Lodhi M,Johnson A,Chen E,Marra M,Martienssen R,McCombie WR

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SRFR1 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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