AT4G31980 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene
Clones
gRNAs

Summary

Gene Symbol	AT4G31980
Entrez Gene ID	829328
Full Name	PPPDE thiol peptidase family protein
Synonyms	F11C18.13
Gene Type	protein-coding
Organism	Arabidopsis thaliana(thale cress)

mRNA and Protein(s)

mRNA	Protein	Name
NM_119349.2	NP_194926.1	PPPDE thiol peptidase family protein

Pathways from BioSystems

Homologies

Arabidopsis thaliana (thale cress)	AT2G25190	NP_565588.1
Arabidopsis thaliana (thale cress)	AT1G67150	NP_176886.1
Drosophila melanogaster (fruit fly)	CG12231	NP_573390.1
Arabidopsis thaliana (thale cress)	AT3G60470	NP_191606.1
Arabidopsis thaliana (thale cress)	AT1G80690	NP_565243.1
Arabidopsis thaliana (thale cress)	AT1G65985	NP_683470.1
Arabidopsis thaliana (thale cress)	AT2G44930	NP_566032.1
Arabidopsis thaliana (thale cress)	AT2G28580	NP_180425.2
Arabidopsis thaliana (thale cress)	AT4G31980	NP_194926.1
Arabidopsis thaliana (thale cress)	AT5G11290	NP_196690.2
Arabidopsis thaliana (thale cress)	AT5G25170	NP_568467.1

Gene Ontology
Bibliography

Related articles in PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following AT4G31980 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT4G31980 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAb02042	NM_119349.2 Latest version!	Arabidopsis thaliana PPPDE thiol peptidase family protein (AT4G31980), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

AT4G31980 ( NM_119349.2 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_194926.1 Arabidopsis thaliana PPPDE thiol peptidase family protein (AT4G31980), partial mRNA.

Price & Availability↑

CloneID	OAb02042
Clone ID Related Accession (Same CDS sequence)	NM_119349.2
Accession Version	NM_119349.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2043bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	PPPDE thiol peptidase family protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_119349.1. COMPLETENESS: incomplete on the 3' end.

ATGTTTTGCA GAAACGTATC GGTGAGGCGG AAGAAGAATT CTGGTACGGT ACCGGTTTAT 
CTGAATGTTT ACGATCTTAC CCCAATGAAT GTTTATGGTT ACTGGCTCGG AATTGGGATC 
TATCACTCTG GTCTCGAAGT TCATGGGGTT GAGTATGGAT ACGGGGCACA CGAGAAATCG 
AGCTCGGGGA TTTTTGAGGT GGAGCCAAAG AAGTGTCCTG GTTTCACATT CAGGAAATCG 
ATTCTTGTTG GTGAAACAGA GATGAAGGCT AAAGAAGTTC GAAGCTTTAT GGAGAAATTA 
TCAGAAGAGT ATCAGGGTAA CAAGTACCAT CTCATCACAA GGAACTGCAA CCATTTCTGC 
AACCATGTTT CTTTGAAACT TACTCACAAA TCAATCCCTA GTTGGGTCAA CCGTCTTGCT 
CGCTTAGGTT TCCTCTGCAA CTGTGTCTTG CCGGCTTGCT TGAACGAGAC TAAAGTGAAG 
CGGGTAGGAA AAGACGGGAA GCTGCTCTTG GAAGGAGAAA ATACGAAGAA GAAGAAGAGG 
AAGAAGAAAA TACGAAGAAG CCGATCAGGT CCTTTATCTT CGTCTTCTTC AAATGCAAGA 
TTAGATAATA CTCCTACACA TAACAGATCA ATATCAACGG GTAATCCTCC TCTTTCTGCT 
TCTCCATCTT GTCCTTTGAG ACCTCGACTT CCTTCTGTTG CATCTGGAGC TGAAGATCAA 
AATCCTCCAA GCAGATACCT CAACGCCAGC TTCTGCAGTG AAGTGCAATG TCACCGGCTT 
TGCTTTGCAT ATGAGAGGAT GAATCAGAAT GAAGGTGACG CCCTTGTCGA TTCCATCAAA 
GCGAAGTTAG CCTTTTTATC TTCTCTTTCC ACCAAATGCT GTATATACAA GGTACCTAAT 
AAGCTCCGCA GACTCAATCC TGATGCATAT ACGCCTCGGC TTGTGTCTTT TGGCCCGCTT 
CATCGTGGTA AAGAAGAGCT TCAAGCTATG GAAGATCAGA AATACAGGTA TTTGCTGAGT 
TTTATCCCTA GAACGAACTC TAGTCTAGAG GACCTTGTTA GACTTGCTAG GACTTGGGAA 
CAAAATGCTC GCAGCTGTTA TGCAGAAGAT GTGAAACTTC ATAGCGATGA GTTTGTTGAG 
ATGTTAGTTG TAGATGGTAG CTTCTTGGTT GAACTTCTTT TGAGGTCTCA TTATCCTCGA 
CTTAGAGGCG AGAATGATCG CATATTTGGC AATTCAATGA TGATCACCGA CGTGTGCCGT 
GACATGATTT TGATAGAAAA TCAGTTACCC TTTTTCGTTG TGAAGGAGAT ATTTCTTCTC 
TTGTTGAATT ACTACCAACA AGGAACACCT TCAATCATAC AGCTCGCGCA ACGCCACTTC 
AGTTATTTCT TGAGCCGCAT TGATGATGAG AAGTTTATTA CAGAGCCAGA ACATTTTGTT 
GATCTTCTGA GGTCTTGTTA TCTGCCACAG TTTCCAATTA AATTAGAATA CACTACAGTG 
AAAGTGGACA ATGCACCTGA AGCAACAGAG CTTCACACTG CTGGTGTTAG GTTCAAGCCA 
GCAGAGACCA GTAGTTGTTT ACTTGACATT AGTTTTGCTG ATGGAGTACT GAAGATTCCA 
ACCATTGTCG TCGATGATCT CACGGAATCC CTCTACAAAA ACATCATTGG GTTTGAACAA 
TGTCGTTGCT CAAATAAAAA CTTCCTCGAC TACATCATGC TGCTCGGTTG CTTCATTAAA 
TCCCCTACAG ATGCTGACTT GCTCATCCAC AGTGGGATCA TCGTAAACTA TCTCGGGAAC 
TCAGTAGATG TTTCAAACTT GTTCAATAGC ATCAGCAAAG AGGTTATCTA TGACAGAAGA 
TTCTACTTTT CGATGCTCTC TGAGAACCTT CAAGCTTACT GCAACACACC ATGGAACAGG 
TGGAAGGCGA TTCTGAGACG TGACTACTTC CACAATCCTT GGGCAGTTGC TTCTGTTTTT 
GCAGCTTTAC TTCTTCTCCT TCTCACTTTC ATACAGTCCG TATGCTCTAT CTTGGCTCTG 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_194926.1
CDS	264..2306
Translation	MFCRNVSVRRKKNSGTVPVYLNVYDLTPMNVYGYWLGIGIYHSGLEVHGVEYGYGAHEKSSSGIFEVEPKKCPGFTFRKSILVGETEMKAKEVRSFMEKLSEEYQGNKYHLITRNCNHFCNHVSLKLTHKSIPSWVNRLARLGFLCNCVLPACLNETKVKRVGKDGKLLLEGENTKKKKRKKKIRRSRSGPLSSSSSNARLDNTPTHNRSISTGNPPLSASPSCPLRPRLPSVASGAEDQNPPSRYLNASFCSEVQCHRLCFAYERMNQNEGDALVDSIKAKLAFLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAMEDQKYRYLLSFIPRTNSSLEDLVRLARTWEQNARSCYAEDVKLHSDEFVEMLVVDGSFLVELLLRSHYPRLRGENDRIFGNSMMITDVCRDMILIENQLPFFVVKEIFLLLLNYYQQGTPSIIQLAQRHFSYFLSRIDDEKFITEPEHFVDLLRSCYLPQFPIKLEYTTVKVDNAPEATELHTAGVRFKPAETSSCLLDISFADGVLKIPTIVVDDLTESLYKNIIGFEQCRCSNKNFLDYIMLLGCFIKSPTDADLLIHSGIIVNYLGNSVDVSNLFNSISKEVIYDRRFYFSMLSENLQAYCNTPWNRWKAILRRDYFHNPWAVASVFAALLLLLLTFIQSVCSILAL

Target ORF information:

RefSeq Version	NM_119349.2
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana PPPDE thiol peptidase family protein (AT4G31980), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_119349.2

ORF Insert Sequence:

ATGTTTTGCA GAAACGTATC GGTGAGGCGG AAGAAGAATT CTGGTACGGT ACCGGTTTAT 
CTGAATGTTT ACGATCTTAC CCCAATGAAT GTTTATGGTT ACTGGCTCGG AATTGGGATC 
TATCACTCTG GTCTCGAAGT TCATGGGGTT GAGTATGGAT ACGGGGCACA CGAGAAATCG 
AGCTCGGGGA TTTTTGAGGT GGAGCCAAAG AAGTGTCCTG GTTTCACATT CAGGAAATCG 
ATTCTTGTTG GTGAAACAGA GATGAAGGCT AAAGAAGTTC GAAGCTTTAT GGAGAAATTA 
TCAGAAGAGT ATCAGGGTAA CAAGTACCAT CTCATCACAA GGAACTGCAA CCATTTCTGC 
AACCATGTTT CTTTGAAACT TACTCACAAA TCAATCCCTA GTTGGGTCAA CCGTCTTGCT 
CGCTTAGGTT TCCTCTGCAA CTGTGTCTTG CCGGCTTGCT TGAACGAGAC TAAAGTGAAG 
CGGGTAGGAA AAGACGGGAA GCTGCTCTTG GAAGGAGAAA ATACGAAGAA GAAGAAGAGG 
AAGAAGAAAA TACGAAGAAG CCGATCAGGT CCTTTATCTT CGTCTTCTTC AAATGCAAGA 
TTAGATAATA CTCCTACACA TAACAGATCA ATATCAACGG GTAATCCTCC TCTTTCTGCT 
TCTCCATCTT GTCCTTTGAG ACCTCGACTT CCTTCTGTTG CATCTGGAGC TGAAGATCAA 
AATCCTCCAA GCAGATACCT CAACGCCAGC TTCTGCAGTG AAGTGCAATG TCACCGGCTT 
TGCTTTGCAT ATGAGAGGAT GAATCAGAAT GAAGGTGACG CCCTTGTCGA TTCCATCAAA 
GCGAAGTTAG CCTTTTTATC TTCTCTTTCC ACCAAATGCT GTATATACAA GGTACCTAAT 
AAGCTCCGCA GACTCAATCC TGATGCATAT ACGCCTCGGC TTGTGTCTTT TGGCCCGCTT 
CATCGTGGTA AAGAAGAGCT TCAAGCTATG GAAGATCAGA AATACAGGTA TTTGCTGAGT 
TTTATCCCTA GAACGAACTC TAGTCTAGAG GACCTTGTTA GACTTGCTAG GACTTGGGAA 
CAAAATGCTC GCAGCTGTTA TGCAGAAGAT GTGAAACTTC ATAGCGATGA GTTTGTTGAG 
ATGTTAGTTG TAGATGGTAG CTTCTTGGTT GAACTTCTTT TGAGGTCTCA TTATCCTCGA 
CTTAGAGGCG AGAATGATCG CATATTTGGC AATTCAATGA TGATCACCGA CGTGTGCCGT 
GACATGATTT TGATAGAAAA TCAGTTACCC TTTTTCGTTG TGAAGGAGAT ATTTCTTCTC 
TTGTTGAATT ACTACCAACA AGGAACACCT TCAATCATAC AGCTCGCGCA ACGCCACTTC 
AGTTATTTCT TGAGCCGCAT TGATGATGAG AAGTTTATTA CAGAGCCAGA ACATTTTGTT 
GATCTTCTGA GGTCTTGTTA TCTGCCACAG TTTCCAATTA AATTAGAATA CACTACAGTG 
AAAGTGGACA ATGCACCTGA AGCAACAGAG CTTCACACTG CTGGTGTTAG GTTCAAGCCA 
GCAGAGACCA GTAGTTGTTT ACTTGACATT AGTTTTGCTG ATGGAGTACT GAAGATTCCA 
ACCATTGTCG TCGATGATCT CACGGAATCC CTCTACAAAA ACATCATTGG GTTTGAACAA 
TGTCGTTGCT CAAATAAAAA CTTCCTCGAC TACATCATGC TGCTCGGTTG CTTCATTAAA 
TCCCCTACAG ATGCTGACTT GCTCATCCAC AGTGGGATCA TCGTAAACTA TCTCGGGAAC 
TCAGTAGATG TTTCAAACTT GTTCAATAGC ATCAGCAAAG AGGTTATCTA TGACAGAAGA 
TTCTACTTTT CGATGCTCTC TGAGAACCTT CAAGCTTACT GCAACACACC ATGGAACAGG 
TGGAAGGCGA TTCTGAGACG TGACTACTTC CACAATCCTT GGGCAGTTGC TTCTGTTTTT 
GCAGCTTTAC TTCTTCTCCT TCTCACTTTC ATACAGTCCG TATGCTCTAT CTTGGCTCTG 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Nature402(6763)769-77(1999 Dec)
Mayer K,Sch?ller C,Wambutt R,Murphy G,Volckaert G,Pohl T,D?sterh?ft A,Stiekema W,Entian KD,Terryn N,Harris B,Ansorge W,Brandt P,Grivell L,Rieger M,Weichselgartner M,de Simone V,Obermaier B,Mache R,M?ller M,Kreis M,Delseny M,Puigdomenech P,Watson M,Schmidtheini T,Reichert B,Portatelle D,Perez-Alonso M,Boutry M,Bancroft I,Vos P,Hoheisel J,Zimmermann W,Wedler H,Ridley P,Langham SA,McCullagh B,Bilham L,Robben J,Van der Schueren J,Grymonprez B,Chuang YJ,Vandenbussche F,Braeken M,Weltjens I,Voet M,Bastiaens I,Aert R,Defoor E,Weitzenegger T,Bothe G,Ramsperger U,Hilbert H,Braun M,Holzer E,Brandt A,Peters S,van Staveren M,Dirske W,Mooijman P,Klein Lankhorst R,Rose M,Hauf J,K?tter P,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Van den Daele H,De Keyser A,Buysshaert C,Gielen J,Villarroel R,De Clercq R,Van Montagu M,Rogers J,Cronin A,Quail M,Bray-Allen S,Clark L,Doggett J,Hall S,Kay M,Lennard N,McLay K,Mayes R,Pettett A,Rajandream MA,Lyne M,Benes V,Rechmann S,Borkova D,Bl?cker H,Scharfe M,Grimm M,L?hnert TH,Dose S,de Haan M,Maarse A,Sch?fer M,M?ller-Auer S,Gabel C,Fuchs M,Fartmann B,Granderath K,Dauner D,Herzl A,Neumann S,Argiriou A,Vitale D,Liguori R,Piravandi E,Massenet O,Quigley F,Clabauld G,M?ndlein A,Felber R,Schnabl S,Hiller R,Schmidt W,Lecharny A,Aubourg S,Chefdor F,Cooke R,Berger C,Montfort A,Casacuberta E,Gibbons T,Weber N,Vandenbol M,Bargues M,Terol J,Torres A,Perez-Perez A,Purnelle B,Bent E,Johnson S,Tacon D,Jesse T,Heijnen L,Schwarz S,Scholler P,Heber S,Francs P,Bielke C,Frishman D,Haase D,Lemcke K,Mewes HW,Stocker S,Zaccaria P,Bevan M,Wilson RK,de la Bastide M,Habermann K,Parnell L,Dedhia N,Gnoj L,Schutz K,Huang E,Spiegel L,Sehkon M,Murray J,Sheet P,Cordes M,Abu-Threideh J,Stoneking T,Kalicki J,Graves T,Harmon G,Edwards J,Latreille P,Courtney L,Cloud J,Abbott A,Scott K,Johnson D,Minx P,Bentley D,Fulton B,Miller N,Greco T,Kemp K,Kramer J,Fulton L,Mardis E,Dante M,Pepin K,Hillier L,Nelson J,Spieth J,Ryan E,Andrews S,Geisel C,Layman D,Du H,Ali J,Berghoff A,Jones K,Drone K,Cotton M,Joshu C,Antonoiu B,Zidanic M,Strong C,Sun H,Lamar B,Yordan C,Ma P,Zhong J,Preston R,Vil D,Shekher M,Matero A,Shah R,Swaby IK,O'Shaughnessy A,Rodriguez M,Hoffmann J,Till S,Granat S,Shohdy N,Hasegawa A,Hameed A,Lodhi M,Johnson A,Chen E,Marra M,Martienssen R,McCombie WR

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AT4G31980 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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