Gene Symbol | DDB1A |
Entrez Gene ID | 825890 |
Full Name | damaged DNA binding protein 1A |
Synonyms | C6L9.100,C6L9_100,damaged DNA binding protein 1A |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » DDB1A cDNA ORF clone
Gene Symbol | DDB1A |
Entrez Gene ID | 825890 |
Full Name | damaged DNA binding protein 1A |
Synonyms | C6L9.100,C6L9_100,damaged DNA binding protein 1A |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_116781.3 | NP_192451.1 | damaged DNA binding protein 1A |
NM_001125468.1 | NP_001118940.1 | damaged DNA binding protein 1A |
Mus musculus (house mouse) | Ddb1 | NP_056550.1 |
Rattus norvegicus (Norway rat) | Ddb1 | NP_741992.2 |
Danio rerio (zebrafish) | ddb1 | NP_956920.1 |
Xenopus tropicalis (tropical clawed frog) | ddb1 | XP_002937687.2 |
DDB1 | XP_001082958.2 | |
Canis lupus familiaris (dog) | DDB1 | XP_533275.2 |
Drosophila melanogaster (fruit fly) | pic | NP_650257.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP002472 | XP_312466.2 |
Oryza sativa (rice) | Os05g0592400 | NP_001056495.1 |
Homo sapiens (human) | DDB1 | NP_001914.3 |
Pan troglodytes (chimpanzee) | DDB1 | XP_508472.4 |
Bos taurus (cattle) | DDB1 | NP_001073731.1 |
Gallus gallus (chicken) | DDB1 | NP_989547.1 |
Arabidopsis thaliana (thale cress) | DDB1A | NP_192451.1 |
Arabidopsis thaliana (thale cress) | DDB1B | NP_193842.1 |
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
ABD1 interacts with DDB1 in vitro and in vivo, indicating that it likely functions as a CUL4 E3 ligase substrate receptor.
Title: ABD1 is an Arabidopsis DCAF substrate receptor for CUL4-DDB1-based E3 ligases that acts as a negative regulator of abscisic acid signaling.
UVH6, DDB1A, and DDB2 all contribute to UV tolerance, heat tolerance and floral patterning.
Title: Interactions between Arabidopsis DNA repair genes UVH6, DDB1A, and DDB2 during abiotic stress tolerance and floral development.
that a DDB1(WDR55) complex could regulate embryo and endosperm development.
Title: The Arabidopsis DDB1 interacting protein WDR55 is required for vegetative development.
DDB1A and DDB1B contribute to DET1 regulation of adult plant growth.
Title: Genetic interactions of Arabidopsis thaliana damaged DNA binding protein 1B (DDB1B) with DDB1A, DET1, and COP1.
DDB1a is an novel RUB-modified protein.
Title: Recovery of DDB1a (damaged DNA binding protein1a) in a screen to identify novel RUB-modified proteins in Arabidopsis thaliana.
The following DDB1A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DDB1A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb31886 | |
Clone ID Related Accession (Same CDS sequence) | NM_116781.3 | |
Accession Version | NM_116781.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3267bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | damaged DNA binding protein 1A | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_116781.2. |
1 | ATGAGCTCAT GGAACTACGT TGTTACGGCT CACAAACCGA CCAGTGTCAC TCACTCGTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_192451.1 |
CDS | 175..3441 |
Translation |
Target ORF information:
Target ORF information:
|
NM_116781.3 |
1 | ATGAGCTCAT GGAACTACGT TGTTACGGCT CACAAACCGA CCAGTGTCAC TCACTCGTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb31887 | |
Clone ID Related Accession (Same CDS sequence) | NM_001125468.1 | |
Accession Version | NM_001125468.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3204bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | damaged DNA binding protein 1A | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). |
1 | ATGAGCTCAT GGAACTACGT TGTTACGGCT CACAAACCGA CCAGTGTCAC TCACTCGTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001118940.1 |
CDS | 167..3370 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001125468.1 |
1 | ATGAGCTCAT GGAACTACGT TGTTACGGCT CACAAACCGA CCAGTGTCAC TCACTCGTGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. |