Gene Symbol | ATG6 |
Entrez Gene ID | 825344 |
Full Name | AUTOPHAGY 6 |
Synonyms | ATATG6,AUTOPHAGY 6,AtBECLIN1,BECLIN1,F21F14.6 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » ATG6 cDNA ORF clone
Gene Symbol | ATG6 |
Entrez Gene ID | 825344 |
Full Name | AUTOPHAGY 6 |
Synonyms | ATATG6,AUTOPHAGY 6,AtBECLIN1,BECLIN1,F21F14.6 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_116036.4 | NP_567116.1 | AUTOPHAGY 6 |
NM_202746.2 | NP_974475.1 | AUTOPHAGY 6 |
NM_001340123.1 | NP_001327722.1 | AUTOPHAGY 6 |
NM_001035837.1 | NP_001030914.1 | AUTOPHAGY 6 |
Homo sapiens (human) | BECN1 | NP_003757.1 |
Pan troglodytes (chimpanzee) | BECN1 | XP_511522.2 |
Canis lupus familiaris (dog) | BECN1 | XP_005624499.1 |
Mus musculus (house mouse) | Becn1 | NP_062530.2 |
Danio rerio (zebrafish) | becn1 | NP_957166.1 |
Eremothecium gossypii | AGOS_ACR154W | NP_983556.1 |
Schizosaccharomyces pombe (fission yeast) | atg6 | XP_001713051.1 |
Arabidopsis thaliana (thale cress) | ATG6 | NP_567116.1 |
Oryza sativa (rice) | Os03g0258500 | NP_001173355.1 |
Bos taurus (cattle) | BECN1 | NP_001028799.1 |
Rattus norvegicus (Norway rat) | Becn1 | NP_001029289.1 |
Neurospora crassa | NCU03122 | XP_964981.2 |
Gallus gallus (chicken) | BECN1 | NP_001006332.1 |
Caenorhabditis elegans (roundworm) | bec-1 | NP_500844.1 |
Oryza sativa (rice) | Os01g0681400 | NP_001043880.1 |
Xenopus tropicalis (tropical clawed frog) | becn1 | NP_001029112.1 |
BECN1 | XP_001111787.1 | |
Drosophila melanogaster (fruit fly) | Atg6 | NP_651209.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP003858 | XP_310418.5 |
Saccharomyces cerevisiae (baker's yeast) | VPS30 | NP_015205.1 |
Kluyveromyces lactis | KLLA0F01166g | XP_455132.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_03694 | XP_003716187.1 |
Oryza sativa (rice) | Os03g0644000 | NP_001050756.1 |
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Salanoubat M, Lemcke K, Rieger M, Ansorge W, Unseld M, Fartmann B, Valle G, Bl?cker H, Perez-Alonso M, Obermaier B, Delseny M, Boutry M, Grivell LA, Mache R, Puigdom?nech P, De Simone V, Choisne N, Artiguenave F, Robert C, Brottier P, Wincker P, Cattolico L, Weissenbach J, Saurin W, Qu?tier F, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Benes V, Wurmbach E, Drzonek H, Erfle H, Jordan N, Bangert S, Wiedelmann R, Kranz H, Voss H, Holland R, Brandt P, Nyakatura G, Vezzi A, D'Angelo M, Pallavicini A, Toppo S, Simionati B, Conrad A, Hornischer K, Kauer G, L?hnert TH, Nordsiek G, Reichelt J, Scharfe M, Sch?n O, Bargues M, Terol J, Climent J, Navarro P, Collado C, Perez-Perez A, Ottenw?lder B, Duchemin D, Cooke R, Laudie M, Berger-Llauro C, Purnelle B, Masuy D, de Haan M, Maarse AC, Alcaraz JP, Cottet A, Casacuberta E, Monfort A, Argiriou A, flores M, Liguori R, Vitale D, Mannhaupt G, Haase D, Schoof H, Rudd S, Zaccaria P, Mewes HW, Mayer KF, Kaul S, Town CD, Koo HL, Tallon LJ, Jenkins J, Rooney T, Rizzo M, Walts A, Utterback T, Fujii CY, Shea TP, Creasy TH, Haas B, Maiti R, Wu D, Peterson J, Van Aken S, Pai G, Militscher J, Sellers P, Gill JE, Feldblyum TV, Preuss D, Lin X, Nierman WC, Salzberg SL, White O, Venter JC, Fraser CM, Kaneko T, Nakamura Y, Sato S, Kato T, Asamizu E, Sasamoto S, Kimura T, Idesawa K, Kawashima K, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Tabata S, , ,
Nature408(6814)820-2(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
the Arabidopsis ATG6 homolog is an essential gene required for pollen germination and plant development.
Title: Autophagy protein 6 (ATG6) is required for pollen germination in Arabidopsis thaliana.
AtBECLIN 1 is required for normal plant development; genes related to autophagy, VPS and the glycosylphosphatidylinositol anchor system, were affected by the deficiency of AtBECLIN 1.
Title: Arabidopsis AtBECLIN 1/AtAtg6/AtVps30 is essential for pollen germination and plant development.
Arabidopsis Atg6/Vps30 functions not only in autophagy, but also plays a pivotal role in pollen germination.
Title: An Arabidopsis homolog of yeast ATG6/VPS30 is essential for pollen germination.
The following ATG6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ATG6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb14066 | |
Clone ID Related Accession (Same CDS sequence) | NM_001035837.1 | |
Accession Version | NM_001035837.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 957bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | AUTOPHAGY 6 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). |
1 | ATGGACAACT CTTTTGTTGT TTTACCTCGA CATAAGCCTC CTCAATCTCA GGGCATTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001030914.1 |
CDS | 376..1332 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001035837.1 |
1 | ATGGACAACT CTTTTGTTGT TTTACCTCGA CATAAGCCTC CTCAATCTCA GGGCATTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb14067 | |
Clone ID Related Accession (Same CDS sequence) | NM_116036.4 | |
Accession Version | NM_116036.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | AUTOPHAGY 6 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Sep 12, 2016 this sequence version replaced NM_116036.3. |
1 | ATGAGGAAAG AGGAGATTCC AGATAAAAGT CGGACTATCC CGATCGATCC GAATCTGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_567116.1 |
CDS | 194..1747 |
Translation |
Target ORF information:
Target ORF information:
|
NM_116036.4 |
1 | ATGAGGAAAG AGGAGATTCC AGATAAAAGT CGGACTATCC CGATCGATCC GAATCTGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb14068 | |
Clone ID Related Accession (Same CDS sequence) | NM_202746.2 | |
Accession Version | NM_202746.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | AUTOPHAGY 6 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). On Sep 12, 2016 this sequence version replaced NM_202746.1. |
1 | ATGAGGAAAG AGGAGATTCC AGATAAAAGT CGGACTATCC CGATCGATCC GAATCTGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_974475.1 |
CDS | 180..1340 |
Translation |
Target ORF information:
Target ORF information:
|
NM_202746.2 |
1 | ATGAGGAAAG AGGAGATTCC AGATAAAAGT CGGACTATCC CGATCGATCC GAATCTGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb38577 | |
Clone ID Related Accession (Same CDS sequence) | NM_001340123.1 | |
Accession Version | NM_001340123.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1404bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | AUTOPHAGY 6 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003074). |
1 | ATGAGGAAAG AGGAGATTCC AGATAAAAGT CGGACTATCC CGATCGATCC GAATCTGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001327722.1 |
CDS | 194..1597 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001340123.1 |
1 | ATGAGGAAAG AGGAGATTCC AGATAAAAGT CGGACTATCC CGATCGATCC GAATCTGCCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. |