Gene Symbol | TRN1 |
Entrez Gene ID | 816198 |
Full Name | transportin 1 |
Synonyms | ATTRN1,F12A24.13,F12A24_13,TRANSPORTIN 1,transportin 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » TRN1 cDNA ORF clone
Gene Symbol | TRN1 |
Entrez Gene ID | 816198 |
Full Name | transportin 1 |
Synonyms | ATTRN1,F12A24.13,F12A24_13,TRANSPORTIN 1,transportin 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_127248.4 | NP_179287.3 | transportin 1 |
NM_001036282.2 | NP_001031359.1 | transportin 1 |
Bos taurus (cattle) | TNPO1 | NP_001070008.1 |
Mus musculus (house mouse) | Tnpo1 | NP_848831.2 |
Schizosaccharomyces pombe (fission yeast) | kap104 | NP_594385.1 |
Xenopus tropicalis (tropical clawed frog) | tnpo1 | XP_004910877.1 |
Homo sapiens (human) | TNPO1 | NP_002261.3 |
Canis lupus familiaris (dog) | TNPO1 | XP_535270.3 |
Danio rerio (zebrafish) | tnpo1 | XP_005172036.1 |
Drosophila melanogaster (fruit fly) | Trn | NP_477368.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_09208 | XP_003709828.1 |
Neurospora crassa | NCU03690 | XP_961466.1 |
Pan troglodytes (chimpanzee) | TNPO1 | XP_001153549.2 |
TNPO1 | XP_001095625.2 | |
Gallus gallus (chicken) | TNPO1 | XP_424806.3 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP005892 | XP_315921.4 |
Rattus norvegicus (Norway rat) | Tnpo1 | NP_001094162.1 |
Caenorhabditis elegans (roundworm) | imb-2 | NP_496987.1 |
Arabidopsis thaliana (thale cress) | TRN1 | NP_179287.3 |
Oryza sativa (rice) | Os04g0691500 | NP_001054359.2 |
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M, Feldblyum TV, Buell CR, Ketchum KA, Lee J, Ronning CM, Koo HL, Moffat KS, Cronin LA, Shen M, Pai G, Van Aken S, Umayam L, Tallon LJ, Gill JE, Adams MD, Carrera AJ, Creasy TH, Goodman HM, Somerville CR, Copenhaver GP, Preuss D, Nierman WC, White O, Eisen JA, Salzberg SL, Fraser CM, Venter JC
Nature402(6763)761-8(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Results indicate that TRN1 positively regulates miRNA activity by promoting the association of miRNAs with AGO1, and they reveal opposing roles of two importin beta family proteins in miRNA loading.
Title: TRANSPORTIN1 Promotes the Association of MicroRNA with ARGONAUTE1 in Arabidopsis.
Results show that tranportin 1 (AtTRN1) recognizes a broad spectrum of proteins having diverse functions, which will potentially be the cargoes of AtTRN1.
Title: Identification of potential cargo proteins of transportin protein AtTRN1 in Arabidopsis thaliana.
The following TRN1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TRN1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb07159 | |
Clone ID Related Accession (Same CDS sequence) | NM_127248.4 | |
Accession Version | NM_127248.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2688bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | transportin 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Nov 3, 2005 this sequence version replaced NM_127248.3. |
1 | ATGGCGGCGA CGGCGGTGGT CTGGCAACCC CGAGACGATG GTCTCGCTGA GATCTGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_179287.3 |
CDS | 93..2780 |
Translation |
Target ORF information:
Target ORF information:
|
NM_127248.4 |
1 | ATGGCGGCGA CGGCGGTGGT CTGGCAACCC CGAGACGATG GTCTCGCTGA GATCTGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb07160 | |
Clone ID Related Accession (Same CDS sequence) | NM_001036282.2 | |
Accession Version | NM_001036282.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2676bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | transportin 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_001036282.1. |
1 | ATGGCGGCGA CGGCGGTGGT CTGGCAACCC CGAGACGATG GTCTCGCTGA GATCTGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001031359.1 |
CDS | 167..2842 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001036282.2 |
1 | ATGGCGGCGA CGGCGGTGGT CTGGCAACCC CGAGACGATG GTCTCGCTGA GATCTGTTCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. |