Gene Symbol | VPS2.1 |
Entrez Gene ID | 815211 |
Full Name | SNF7 family protein |
Synonyms | T12H3.8,T12H3_8,VPS2 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » VPS2.1 cDNA ORF clone
Gene Symbol | VPS2.1 |
Entrez Gene ID | 815211 |
Full Name | SNF7 family protein |
Synonyms | T12H3.8,T12H3_8,VPS2 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_126650.4 | NP_565336.1 | SNF7 family protein |
NM_001335305.1 | NP_001324346.1 | SNF7 family protein |
Xenopus tropicalis (tropical clawed frog) | chmp2a | NP_001005008.1 |
Homo sapiens (human) | CHMP2A | NP_940818.1 |
Canis lupus familiaris (dog) | CHMP2A | XP_850536.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP001285 | XP_321862.3 |
Caenorhabditis elegans (roundworm) | vps-2 | NP_496717.1 |
Schizosaccharomyces pombe (fission yeast) | did4 | NP_593871.3 |
Oryza sativa (rice) | Os07g0236800 | NP_001059248.1 |
Bos taurus (cattle) | CHMP2A | NP_001029722.1 |
Mus musculus (house mouse) | Chmp2a | NP_081161.1 |
Rattus norvegicus (Norway rat) | Chmp2a | NP_001102376.1 |
Danio rerio (zebrafish) | bc2 | NP_998682.1 |
Neurospora crassa | NCU00435 | XP_956699.1 |
Pan troglodytes (chimpanzee) | CHMP2A | XP_003316813.1 |
CHMP2A | XP_001099219.1 | |
Gallus gallus (chicken) | CHMP2A | NP_001074361.1 |
Drosophila melanogaster (fruit fly) | vps2 | NP_651455.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05208 | XP_003712753.1 |
Saccharomyces cerevisiae (baker's yeast) | DID4 | NP_012924.2 |
Kluyveromyces lactis | KLLA0B13343g | XP_452125.1 |
Eremothecium gossypii | AGOS_ABR002C | NP_982948.1 |
Arabidopsis thaliana (thale cress) | VPS2.1 | NP_565336.1 |
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M, Feldblyum TV, Buell CR, Ketchum KA, Lee J, Ronning CM, Koo HL, Moffat KS, Cronin LA, Shen M, Pai G, Van Aken S, Umayam L, Tallon LJ, Gill JE, Adams MD, Carrera AJ, Creasy TH, Goodman HM, Somerville CR, Copenhaver GP, Preuss D, Nierman WC, White O, Eisen JA, Salzberg SL, Fraser CM, Venter JC
Nature402(6763)761-8(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data show that AMSH1, an AMSH3-related DUB, interacts with the ESCRT-III subunit vacuolar protein sorting2.1 (VPS2.1) and that impairment of both AMSH1 and VPS2.1 causes early senescence and hypersensitivity to artificial carbon starvation in the dark.
Title: The deubiquitinating enzyme AMSH1 and the ESCRT-III subunit VPS2.1 are required for autophagic degradation in Arabidopsis.
AMSH3 interacts with ESCRT-III subunits VPS2.1 and VPS24.1. The interaction of ESCRT-III subunits with AMSH3 is mediated by the MIM1 domain and depends on the MIT domain of AMSH3.
Title: The Arabidopsis deubiquitinating enzyme AMSH3 interacts with ESCRT-III subunits and regulates their localization.
The following VPS2.1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VPS2.1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb06929 | |
Clone ID Related Accession (Same CDS sequence) | NM_126650.4 | |
Accession Version | NM_126650.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 678bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | SNF7 family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_126650.3. |
1 | ATGATGAATT CAATCTTCGG AAAGCGAAAA ACTCCCGCAG AACTTCTGCG GGAGAACAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_565336.1 |
CDS | 247..924 |
Translation |
Target ORF information:
Target ORF information:
|
NM_126650.4 |
1 | ATGATGAATT CAATCTTCGG AAAGCGAAAA ACTCCCGCAG AACTTCTGCG GGAGAACAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb35580 | |
Clone ID Related Accession (Same CDS sequence) | NM_001335305.1 | |
Accession Version | NM_001335305.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 615bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | SNF7 family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). |
1 | ATGCTGGATA AGTCTATCAG AGAGATAGAG AGGGAGAGAC AAGGCCTACA AACACAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001324346.1 |
CDS | 481..1095 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001335305.1 |
1 | ATGCTGGATA AGTCTATCAG AGAGATAGAG AGGGAGAGAC AAGGCCTACA AACACAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. |