| Gene Symbol | trpa1 |
| Entrez Gene ID | 100556580 |
| Full Name | transient receptor potential cation channel subfamily A member 1 |
| Gene Type | protein-coding |
| Organism | Anolis carolinensis(green anole) |
ORF » Species Summary » Anolis carolinensis » trpa1 cDNA ORF clone
| Gene Symbol | trpa1 |
| Entrez Gene ID | 100556580 |
| Full Name | transient receptor potential cation channel subfamily A member 1 |
| Gene Type | protein-coding |
| Organism | Anolis carolinensis(green anole) |
| mRNA | Protein | Name |
|---|---|---|
| XM_008108580.2 | XP_008106787.1 | transient receptor potential cation channel subfamily A member 1 isoform X1 |
| NM_001293113.1 | NP_001280042.1 | transient receptor potential cation channel subfamily A member 1 |
| XM_008108579.2 | XP_008106786.2 | transient receptor potential cation channel subfamily A member 1 isoform X2 |
Analysis of transient receptor potential ankyrin 1 (TRPA1) in frogs and lizards illuminates both nociceptive heat and chemical sensitivities and coexpression with TRP vanilloid 1 (TRPV1) in ancestral vertebrates.
Saito S, Nakatsuka K, Takahashi K, Fukuta N, Imagawa T, Ohta T, Tominaga M
The Journal of biological chemistry287(36)30743-54(2012 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following trpa1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the trpa1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OAn32448 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008108580.2 , NM_001293113.1 | |
| Accession Version | NM_001293113.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3339bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-08-27 | |
| Organism | Anolis carolinensis(green anole) | |
| Product | transient receptor potential cation channel subfamily A member 1 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB693190.1. On May 29, 2014 this sequence version replaced XM_003219643.2. ##Evidence-Data-START## Transcript exon combination :: AB693190.1, GAFK01067429.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00765497, SAMN00765499 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGAAGCGCT CCCTCCGCAA GTGGCTGCAG TCCGGGGAGA AGAAGGCGCG GACCTCCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001280042.1 |
| CDS | 1..3339 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001293113.1 |
1 | ATGAAGCGCT CCCTCCGCAA GTGGCTGCAG TCCGGGGAGA AGAAGGCGCG GACCTCCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OAn32448 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008108580.2 , NM_001293113.1 | |
| Accession Version | XM_008108580.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3339bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-05-30 | |
| Organism | Anolis carolinensis(green anole) | |
| Product | transient receptor potential cation channel subfamily A member 1 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_014779.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 31, 2016 this sequence version replaced XM_008108580.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Anolis carolinensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAAGCGCT CCCTCCGCAA GTGGCTGCAG TCCGGGGAGA AGAAGGCGCG GACCTCCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008106787.1 |
| CDS | 161..3499 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008108580.2 |
1 | ATGAAGCGCT CCCTCCGCAA GTGGCTGCAG TCCGGGGAGA AGAAGGCGCG GACCTCCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OAn32449 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008108579.2 | |
| Accession Version | XM_008108579.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 3297bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-05-30 | |
| Organism | Anolis carolinensis(green anole) | |
| Product | transient receptor potential cation channel subfamily A member 1 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_014779.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 31, 2016 this sequence version replaced XM_008108579.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Anolis carolinensis Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAAGCGCT CCCTCCGCAA GTGGCTGCAG TCCGGGGAGA AGAAGGCGCG GACCTCCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008106786.2 |
| CDS | 807..4103 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008108579.2 |
1 | ATGAAGCGCT CCCTCCGCAA GTGGCTGCAG TCCGGGGAGA AGAAGGCGCG GACCTCCTAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Analysis of transient receptor potential ankyrin 1 (TRPA1) in frogs and lizards illuminates both nociceptive heat and chemical sensitivities and coexpression with TRP vanilloid 1 (TRPV1) in ancestral vertebrates. |