Gene Symbol | CSN1S1 |
Entrez Gene ID | 100750242 |
Full Name | casein alpha s1 |
Synonyms | CSCN1,csn1n1 |
Gene Type | protein-coding |
Organism | Capra hircus(goat) |
ORF » Species Summary » Capra hircus » CSN1S1 cDNA ORF clone
Gene Symbol | CSN1S1 |
Entrez Gene ID | 100750242 |
Full Name | casein alpha s1 |
Synonyms | CSCN1,csn1n1 |
Gene Type | protein-coding |
Organism | Capra hircus(goat) |
mRNA | Protein | Name |
---|---|---|
XM_018049128.1 | XP_017904617.1 | alpha-S1-casein isoform X2 |
XM_018049130.1 | XP_017904619.1 | alpha-S1-casein isoform X4 |
XM_018049131.1 | XP_017904620.1 | alpha-S1-casein isoform X5 |
XM_018049133.1 | XP_017904622.1 | alpha-S1-casein isoform X7 |
NM_001285695.1 | NP_001272624.1 | alpha-S1-casein precursor |
XM_018049129.1 | XP_017904618.1 | alpha-S1-casein isoform X3 |
XM_018049132.1 | XP_017904621.1 | alpha-S1-casein isoform X6 |
XM_018049127.1 | XP_017904616.1 | alpha-S1-casein isoform X1 |
Including ? s1 casein gene information in genomic evaluations of French dairy goats.
Carillier-Jacquin C, Larroque H, Robert-Grani? C
Genetics, selection, evolution : GSE48(1)54(2016 08)
The goat alphas1-casein gene: gene structure and promoter analysis.
Ramunno L, Cosenza G, Rando A, Illario R, Gallo D, Di Berardino D, Masina P
Gene334105-11(2004 Jun)
Occurrence of a LINE sequence in the 3' UTR of the goat alpha s1-casein E-encoding allele associated with reduced protein synthesis level.
P?rez MJ, Leroux C, Bonastre AS, Martin P
Gene147(2)179-87(1994 Sep)
Sequence of caprine alpha s1-casein and characterization of those of its genetic variants which are synthesized at a high level, alpha s1-CnA, B and C.
Brignon G, Mah? MF, Grosclaude F, Ribadeau-Dumas B
Protein sequences & data analysis2(3)181-8(1989 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The alpha s1 casein genotype had a significant effect on milk yield, fat content and protein content.
Title: Including ? s1 casein gene information in genomic evaluations of French dairy goats.
The following CSN1S1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CSN1S1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCa156977 | |
Clone ID Related Accession (Same CDS sequence) | NM_001285695.1 | |
Accession Version | NM_001285695.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 642bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-24 | |
Organism | Capra hircus(goat) | |
Product | alpha-S1-casein precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY344966.1. On Oct 23, 2013 this sequence version replaced XR_310083.1. ##Evidence-Data-START## Transcript exon combination :: AY344966.1, JX047868.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01086876, SAMN02712004 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001272624.1 |
CDS | 1..642 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa150936 | |
Clone ID Related Accession (Same CDS sequence) | XM_018049127.1 | |
Accession Version | XM_018049127.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 645bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Capra hircus(goat) | |
Product | alpha-S1-casein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030813.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capra hircus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017904616.1 |
CDS | 120..764 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa150937 | |
Clone ID Related Accession (Same CDS sequence) | XM_018049128.1 | |
Accession Version | XM_018049128.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 642bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Capra hircus(goat) | |
Product | alpha-S1-casein isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030813.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capra hircus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017904617.1 |
CDS | 120..761 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa150938 | |
Clone ID Related Accession (Same CDS sequence) | XM_018049129.1 | |
Accession Version | XM_018049129.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 621bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Capra hircus(goat) | |
Product | alpha-S1-casein isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030813.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capra hircus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017904618.1 |
CDS | 120..740 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa150939 | |
Clone ID Related Accession (Same CDS sequence) | XM_018049130.1 | |
Accession Version | XM_018049130.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 621bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Capra hircus(goat) | |
Product | alpha-S1-casein isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030813.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capra hircus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017904619.1 |
CDS | 120..740 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa150940 | |
Clone ID Related Accession (Same CDS sequence) | XM_018049131.1 | |
Accession Version | XM_018049131.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 612bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Capra hircus(goat) | |
Product | alpha-S1-casein isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030813.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capra hircus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TGAAGTCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017904620.1 |
CDS | 120..731 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TGAAGTCCTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa150941 | |
Clone ID Related Accession (Same CDS sequence) | XM_018049132.1 | |
Accession Version | XM_018049132.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 597bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Capra hircus(goat) | |
Product | alpha-S1-casein isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030813.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capra hircus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017904621.1 |
CDS | 120..716 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa150942 | |
Clone ID Related Accession (Same CDS sequence) | XM_018049133.1 | |
Accession Version | XM_018049133.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 534bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Capra hircus(goat) | |
Product | alpha-S1-casein isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030813.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Capra hircus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017904622.1 |
CDS | 120..653 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAACTTC TCATCCTTAC CTGTCTTGTG GCTGTTGCTC TTGCCAGGCC TAAACATCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Including ? s1 casein gene information in genomic evaluations of French dairy goats. |
The goat alphas1-casein gene: gene structure and promoter analysis. |
Occurrence of a LINE sequence in the 3' UTR of the goat alpha s1-casein E-encoding allele associated with reduced protein synthesis level. |
Sequence of caprine alpha s1-casein and characterization of those of its genetic variants which are synthesized at a high level, alpha s1-CnA, B and C. |