Gene Symbol | MATR3 |
Entrez Gene ID | 100062181 |
Full Name | matrin 3 |
Gene Type | protein-coding |
Organism | Equus caballus(horse) |
ORF » Species Summary » Equus caballus » MATR3 cDNA ORF clone
Gene Symbol | MATR3 |
Entrez Gene ID | 100062181 |
Full Name | matrin 3 |
Gene Type | protein-coding |
Organism | Equus caballus(horse) |
mRNA | Protein | Name |
---|---|---|
XM_014730314.1 | XP_014585800.1 | matrin-3 isoform X1 |
XM_014730315.1 | XP_014585801.1 | matrin-3 isoform X2 |
XM_014730313.2 | XP_014585799.2 | matrin-3 isoform X1 |
XM_014730314.2 | XP_014585800.2 | matrin-3 isoform X1 |
NM_001205261.1 | NP_001192190.1 | matrin-3 |
XM_014730317.1 | XP_014585803.1 | matrin-3 isoform X4 |
XM_014730313.1 | XP_014585799.1 | matrin-3 isoform X1 |
XM_014730316.1 | XP_014585802.1 | matrin-3 isoform X3 |
XM_014730317.2 | XP_014585803.2 | matrin-3 isoform X2 |
Annotation of the Protein Coding Regions of the Equine Genome.
Hestand MS, Kalbfleisch TS, Coleman SJ, Zeng Z, Liu J, Orlando L, MacLeod JN
PloS one10(6)e0124375(2015)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following MATR3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MATR3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHb04897 | |
Clone ID Related Accession (Same CDS sequence) | NM_001205261.1 | |
Accession Version | NM_001205261.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2550bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-01-22 | |
Organism | Equus caballus(horse) | |
Product | matrin-3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from PJAA01000015.1, CX593658.1, CX603153.1, DN506315.1, CX604359.1, DN509706.1, CX605010.1, CX604259.1 and BM780947.1. On or before Apr 7, 2011 this sequence version replaced XM_001504247.2, XM_001504245.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were predicted based on homologous alignment with human NM_018834.5. ##Evidence-Data-START## Transcript exon combination :: GDHK01048868.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN05591754, SAMN05591755 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001192190.1 |
CDS | 339..2888 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001205261.1 |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb34862 | |
Clone ID Related Accession (Same CDS sequence) | XM_014730314.1 , XM_014730313.1 | |
Accession Version | XM_014730314.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2694bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-11-19 | |
Organism | Equus caballus(horse) | |
Product | matrin-3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001867377.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014585800.1 |
CDS | 195..2888 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014730314.1 |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb34862 | |
Clone ID Related Accession (Same CDS sequence) | XM_014730314.1 , XM_014730313.1 | |
Accession Version | XM_014730313.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2694bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-11-19 | |
Organism | Equus caballus(horse) | |
Product | matrin-3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001867377.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014585799.1 |
CDS | 287..2980 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014730313.1 |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb34863 | |
Clone ID Related Accession (Same CDS sequence) | XM_014730315.1 | |
Accession Version | XM_014730315.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2652bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-11-19 | |
Organism | Equus caballus(horse) | |
Product | matrin-3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001867377.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014585801.1 |
CDS | 178..2829 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014730315.1 |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb34864 | |
Clone ID Related Accession (Same CDS sequence) | XM_014730316.1 | |
Accession Version | XM_014730316.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2535bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-11-19 | |
Organism | Equus caballus(horse) | |
Product | matrin-3 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001867377.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014585802.1 |
CDS | 178..2712 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014730316.1 |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb34865 | |
Clone ID Related Accession (Same CDS sequence) | XM_014730317.1 | |
Accession Version | XM_014730317.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2391bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-11-19 | |
Organism | Equus caballus(horse) | |
Product | matrin-3 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_001867377.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Equus caballus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014585803.1 |
CDS | 178..2568 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014730317.1 |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb48313 | |
Clone ID Related Accession (Same CDS sequence) | XM_014730313.2 , XM_014730314.2 | |
Accession Version | XM_014730313.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2694bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-01-22 | |
Organism | Equus caballus(horse) | |
Product | matrin-3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009157.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 23, 2018 this sequence version replaced XM_014730313.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014585799.2 |
CDS | 328..3021 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014730313.2 |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb48313 | |
Clone ID Related Accession (Same CDS sequence) | XM_014730313.2 , XM_014730314.2 | |
Accession Version | XM_014730314.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2694bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-01-22 | |
Organism | Equus caballus(horse) | |
Product | matrin-3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009157.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 23, 2018 this sequence version replaced XM_014730314.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014585800.2 |
CDS | 304..2997 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014730314.2 |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHb48314 | |
Clone ID Related Accession (Same CDS sequence) | XM_014730317.2 | |
Accession Version | XM_014730317.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2391bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-01-22 | |
Organism | Equus caballus(horse) | |
Product | matrin-3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_009157.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 23, 2018 this sequence version replaced XM_014730317.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Equus caballus Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014585803.2 |
CDS | 178..2568 |
Translation |
Target ORF information:
Target ORF information:
|
XM_014730317.2 |
1 | ATGTCCAAGT CATTCCAGCA GTCATCTCTC GGTAGGGACT CGCAGGGTCA TGGGCGTGAC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Annotation of the Protein Coding Regions of the Equine Genome. |