Gene Symbol | ATN1 |
Entrez Gene ID | 451803 |
Full Name | atrophin 1 |
Synonyms | DRPLA |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » ATN1 cDNA ORF clone
Gene Symbol | ATN1 |
Entrez Gene ID | 451803 |
Full Name | atrophin 1 |
Synonyms | DRPLA |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_016922570.1 | XP_016778059.1 | atrophin-1 isoform X1 |
XM_016922570.2 | XP_016778059.1 | atrophin-1 isoform X1 |
NM_001034165.1 | NP_001029337.1 | atrophin-1 |
XM_016922571.2 | XP_016778060.1 | atrophin-1 isoform X2 |
XM_016922571.1 | XP_016778060.1 | atrophin-1 isoform X2 |
XM_016922569.2 | XP_016778058.1 | atrophin-1 isoform X1 |
XM_016922569.1 | XP_016778058.1 | atrophin-1 isoform X1 |
Mus musculus (house mouse) | Atn1 | NP_031907.2 |
Gallus gallus (chicken) | ATN1 | XP_425518.4 |
Canis lupus familiaris (dog) | ATN1 | XP_003640006.1 |
Bos taurus (cattle) | ATN1 | NP_001192677.1 |
Rattus norvegicus (Norway rat) | LOC100911672 | XP_003750706.1 |
Pan troglodytes (chimpanzee) | ATN1 | NP_001029337.1 |
Rattus norvegicus (Norway rat) | Atn1 | NP_058924.2 |
Homo sapiens (human) | ATN1 | NP_001007027.1 |
ATN1 | XP_001118307.2 |
Accelerated evolution of nervous system genes in the origin of Homo sapiens.
Dorus S, Vallender EJ, Evans PD, Anderson JR, Gilbert SL, Mahowald M, Wyckoff GJ, Malcom CM, Lahn BT
Cell119(7)1027-40(2004 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following ATN1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ATN1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc00166 | |
Clone ID Related Accession (Same CDS sequence) | NM_001034165.1 , XM_016922571.2 , XM_016922571.1 | |
Accession Version | NM_001034165.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3561bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-16 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | atrophin-1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY665258.1. On Oct 16, 2005 this sequence version replaced XM_508975.1. ##Evidence-Data-START## Transcript exon combination :: AY665258.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01120804, SAMN01120805 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001029337.1 |
CDS | 1..3561 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001034165.1 |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc00166 | |
Clone ID Related Accession (Same CDS sequence) | NM_001034165.1 , XM_016922571.2 , XM_016922571.1 | |
Accession Version | XM_016922571.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3561bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | atrophin-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036891.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016922571.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016778060.1 |
CDS | 299..3859 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016922571.2 |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc00166 | |
Clone ID Related Accession (Same CDS sequence) | NM_001034165.1 , XM_016922571.2 , XM_016922571.1 | |
Accession Version | XM_016922571.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3561bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | atrophin-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006479.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016778060.1 |
CDS | 341..3901 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016922571.1 |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc65266 | |
Clone ID Related Accession (Same CDS sequence) | XM_016922570.1 , XM_016922570.2 , XM_016922569.2 , XM_016922569.1 | |
Accession Version | XM_016922570.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3564bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | atrophin-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006479.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016778059.1 |
CDS | 324..3887 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016922570.1 |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc65266 | |
Clone ID Related Accession (Same CDS sequence) | XM_016922570.1 , XM_016922570.2 , XM_016922569.2 , XM_016922569.1 | |
Accession Version | XM_016922570.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3564bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | atrophin-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036891.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016922570.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016778059.1 |
CDS | 267..3830 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016922570.2 |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc65266 | |
Clone ID Related Accession (Same CDS sequence) | XM_016922570.1 , XM_016922570.2 , XM_016922569.2 , XM_016922569.1 | |
Accession Version | XM_016922569.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3564bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | atrophin-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036891.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016922569.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016778058.1 |
CDS | 298..3861 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016922569.2 |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc65266 | |
Clone ID Related Accession (Same CDS sequence) | XM_016922570.1 , XM_016922570.2 , XM_016922569.2 , XM_016922569.1 | |
Accession Version | XM_016922569.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3564bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | atrophin-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006479.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016778058.1 |
CDS | 340..3903 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016922569.1 |
1 | ATGAAGACAC GACAGAATAA AGACTCGATG TCAATGAGGA GTGGACGGAA GAAAGAGGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Accelerated evolution of nervous system genes in the origin of Homo sapiens. |