Gene Symbol | MAMU-DRB5 |
Entrez Gene ID | 100428228 |
Full Name | HLA class II histocompatibility antigen, DRB1-4 beta chain |
Synonyms | Mamu-DRB1,drb |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » MAMU-DRB5 cDNA ORF clone
Gene Symbol | MAMU-DRB5 |
Entrez Gene ID | 100428228 |
Full Name | HLA class II histocompatibility antigen, DRB1-4 beta chain |
Synonyms | Mamu-DRB1,drb |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_028847686.1 | XP_028703519.1 | LOW QUALITY PROTEIN: MHC class II antigen, Mamu-DRB5 |
XM_015136053.1 | XP_014991539.1 | MHC class II antigen, Mamu-DRB5 |
NM_001040030.2 | NP_001035119.2 | MHC class II antigen, Mamu-DRB5 precursor |
NM_001040030.1 | NP_001035119.1 | MHC class II antigen, Mamu-DRB5 precursor |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
Genetic makeup of the DR region in rhesus macaques: gene content, transcripts, and pseudogenes.
de Groot N, Doxiadis GG, De Groot NG, Otting N, Heijmans C, Rouweler AJ, Bontrop RE
Journal of immunology (Baltimore, Md. : 1950)172(10)6152-7(2004 May)
Biochemical and molecular characterization of rhesus monkey major histocompatibility complex class II DR.
Lekutis C, Letvin NL
Human immunology43(1)72-80(1995 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following MAMU-DRB5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MAMU-DRB5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb01170 | |
Clone ID Related Accession (Same CDS sequence) | NM_001040030.1 | |
Accession Version | NM_001040030.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 801bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-01-03 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | MHC class II antigen, Mamu-DRB5 precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AJ601360.2. On Sep 28, 2010 this sequence version replaced XM_002803685.1. ##Evidence-Data-START## Transcript exon combination :: AB185500.1, AJ601359.2 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2707845, SAMEA2707846 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGTGTGTC TGAGGTTCCC TGGAGGCTCC TGCATGGCAG CTCTGACAGT GACACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001035119.1 |
CDS | 1..801 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001040030.1 |
1 | ATGGTGTGTC TGAGGTTCCC TGGAGGCTCC TGCATGGCAG CTCTGACAGT GACACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb31917 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136053.1 , NM_001040030.2 | |
Accession Version | NM_001040030.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 801bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-28 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | MHC class II antigen, Mamu-DRB5 precursor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JSUE03030660.1. On or before Mar 13, 2018 this sequence version replaced XM_015136053.1, NM_001040030.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: JV713435.1, JU485432.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4688315, SAMEA4688317 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGGTGTGTC TGAAGCTCCC TGGAGGCTCC TGCATGGCAG CTCTCACAGT GACACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001035119.2 |
CDS | 48..848 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001040030.2 |
1 | ATGGTGTGTC TGAAGCTCCC TGGAGGCTCC TGCATGGCAG CTCTCACAGT GACACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb31917 | |
Clone ID Related Accession (Same CDS sequence) | XM_015136053.1 , NM_001040030.2 | |
Accession Version | XM_015136053.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 801bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | MHC class II antigen, Mamu-DRB5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014804797.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGTGTC TGAAGCTCCC TGGAGGCTCC TGCATGGCAG CTCTCACAGT GACACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014991539.1 |
CDS | 63..863 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015136053.1 |
1 | ATGGTGTGTC TGAAGCTCCC TGGAGGCTCC TGCATGGCAG CTCTCACAGT GACACTGATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb84942 | |
Clone ID Related Accession (Same CDS sequence) | XM_028847686.1 | |
Accession Version | XM_028847686.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 849bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | LOW QUALITY PROTEIN: MHC class II antigen, Mamu-DRB5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041757.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## |
1 | ATGAGACTTG TCTGCTCCTC TGGCCCCGGT CCTGTCCTGT TCTCCAGCAT GGTGTGTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028703519.1 |
CDS | 54..902 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028847686.1 |
1 | ATGAGACTTG TCTGCTCCTC TGGCCCCGGT CCTGTCCTGT TCTCCAGCAT GGTGTGTCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |
Genetic makeup of the DR region in rhesus macaques: gene content, transcripts, and pseudogenes. |
Biochemical and molecular characterization of rhesus monkey major histocompatibility complex class II DR. |