sox12 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	sox12
Entrez Gene ID	562381
Full Name	SRY (sex determining region Y)-box 12
Synonyms	si:dkey-76p14.4,zK76P14.4
General protein information	Preferred Names SRY (sex determining region Y)-box 12 Names transcription factor SOX-12
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001030278.1	NP_001025449.1	transcription factor SOX-12

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.
Wang Y, Lu Y, Zhang Y, Ning Z, Li Y, Zhao Q, Lu H, Huang R, Xia X, Feng Q, Liang X, Liu K, Zhang L, Lu T, Huang T, Fan D, Weng Q, Zhu C, Lu Y, Li W, Wen Z, Zhou C, Tian Q, Kang X, Shi M, Zhang W, Jang S, Du F, He S, Liao L, Li Y, Gui B, He H, Ning Z, Yang C, He L, Luo L, Yang R, Luo Q, Liu X, Li S, Huang W, Xiao L, Lin H, Han B, Zhu Z
Nature genetics47(6)625-31(2015 Jun)

Somatic mutagenesis with a Sleeping Beauty transposon system leads to solid tumor formation in zebrafish.
McGrail M, Hatler JM, Kuang X, Liao HK, Nannapaneni K, Watt KE, Uhl JD, Largaespada DA, Vollbrecht E, Scheetz TE, Dupuy AJ, Hostetter JM, Essner JJ
PloS one6(4)e18826(2011 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following sox12 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sox12 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa34947	NM_001030278.1 Latest version!	Danio rerio SRY-box transcription factor 12 (sox12), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

sox12 ( NM_001030278.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001025449.1 Danio rerio SRY-box transcription factor 12 (sox12), mRNA.

Price & Availability↑

CloneID	ODa34947
Clone ID Related Accession (Same CDS sequence)	NM_001030278.1
Accession Version	NM_001030278.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1068bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-06-30
Organism	Danio rerio(zebrafish)
Product	transcription factor SOX-12
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL831791.6. On Aug 7, 2005 this sequence version replaced XM_685765.1. ##Evidence-Data-START## Transcript exon combination :: AL922193.1, GFIL01039317.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGTTCAGC AAAGAACCCA CAAATACTCG TCAGTCATGG ACAGCAATTC AAGCAGAGAG 
GTGTTTGTGG GACTGGCGGC TGAGGACGAT GCTGAGGTGT TTGGACATGT ACCTTCTAAC 
AAAGACCCCA ACTGGTGCAA AACTCCAACT GGGCACATCA AAAGACCAAT GAACGCTTTT 
ATGGTCTGGT CTCAGATTGA AAGACGGAAG ATCATGGAGC AATGGCCTGA TATGCACAAT 
GCTGAGATTT CAAAGCGCCT TGGGAAACGC TGGAAACTAC TGCCTGACTA TGAGAAGATA 
CCCTTTATCA AAGAGGCCGA AAGACTGCGT CTAAAGCACA TGGCTGACTA TCCTGACTAC 
AAGTACCGGC CCAGGAAGAA AAGCAAGGGC TCAACCCCTG TCAAACTTGG CGAGAAGTTG 
CCTATGAAAT CCAGCAAGCC CCTTCCAGGA AGATCTTCCG GGCTCTCCTG CAAAGGGCTT 
AAGATCAAAC CTGCTTCTTC AAAGCATAAA ATGAACTTTA GTAGCAATAA ATACAAGAGC 
TACAGTGAGA GCATGAGCGA CGACGACACC ATGGATGTAA ACCTAGAAAG TCCAGTGACT 
CAGCAAGACG ATCGCAACAC GTCAAGTCAC TTTGTCCTTC ACCAGCAGGC TACTGTTCAA 
TCTGAGGACC AGCAACCAAT TCCTGAGCTC AGAGTGAAAG TACCCATCTC TCAAACCAGC 
AGCATCCAGA GTCTCTCCTC GGACAGCGAA TGCCAGGCTT TCCCAGAGTC CACGACGAGC 
GAACCACGAG GGTCCACATC TGGAAGATCT TCCACTCCGA CCTCGACCAG CTCCTCCTCT 
TTGGTGTCGT CAGCATGTTC GGATGAGGAA CTGGACGAGG AACTCTTGCA TATAATTTCC 
AACAGTATGC CTATGGACTG TTCCACTCTG GACAAGGACT TTGAAGCATT TAACGCCAAC 
TCAGGATCTC ATTTTGACTT CCCAGATTAC TGCACTCCAG AGGTGAATGA AATGATTTCT 
GGAGACTTGC TCGTGCCCAG CATCTCAGAC CTAGTGTTCA CCTACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001025449.1
CDS	334..1401
Translation	MVQQRTHKYSSVMDSNSSREVFVGLAAEDDAEVFGHVPSNKDPNWCKTPTGHIKRPMNAFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEAERLRLKHMADYPDYKYRPRKKSKGSTPVKLGEKLPMKSSKPLPGRSSGLSCKGLKIKPASSKHKMNFSSNKYKSYSESMSDDDTMDVNLESPVTQQDDRNTSSHFVLHQQATVQSEDQQPIPELRVKVPISQTSSIQSLSSDSECQAFPESTTSEPRGSTSGRSSTPTSTSSSSLVSSACSDEELDEELLHIISNSMPMDCSTLDKDFEAFNANSGSHFDFPDYCTPEVNEMISGDLLVPSISDLVFTY

Target ORF information:

RefSeq Version	NM_001030278.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio SRY-box transcription factor 12 (sox12), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001030278.1

ORF Insert Sequence:

ATGGTTCAGC AAAGAACCCA CAAATACTCG TCAGTCATGG ACAGCAATTC AAGCAGAGAG 
GTGTTTGTGG GACTGGCGGC TGAGGACGAT GCTGAGGTGT TTGGACATGT ACCTTCTAAC 
AAAGACCCCA ACTGGTGCAA AACTCCAACT GGGCACATCA AAAGACCAAT GAACGCTTTT 
ATGGTCTGGT CTCAGATTGA AAGACGGAAG ATCATGGAGC AATGGCCTGA TATGCACAAT 
GCTGAGATTT CAAAGCGCCT TGGGAAACGC TGGAAACTAC TGCCTGACTA TGAGAAGATA 
CCCTTTATCA AAGAGGCCGA AAGACTGCGT CTAAAGCACA TGGCTGACTA TCCTGACTAC 
AAGTACCGGC CCAGGAAGAA AAGCAAGGGC TCAACCCCTG TCAAACTTGG CGAGAAGTTG 
CCTATGAAAT CCAGCAAGCC CCTTCCAGGA AGATCTTCCG GGCTCTCCTG CAAAGGGCTT 
AAGATCAAAC CTGCTTCTTC AAAGCATAAA ATGAACTTTA GTAGCAATAA ATACAAGAGC 
TACAGTGAGA GCATGAGCGA CGACGACACC ATGGATGTAA ACCTAGAAAG TCCAGTGACT 
CAGCAAGACG ATCGCAACAC GTCAAGTCAC TTTGTCCTTC ACCAGCAGGC TACTGTTCAA 
TCTGAGGACC AGCAACCAAT TCCTGAGCTC AGAGTGAAAG TACCCATCTC TCAAACCAGC 
AGCATCCAGA GTCTCTCCTC GGACAGCGAA TGCCAGGCTT TCCCAGAGTC CACGACGAGC 
GAACCACGAG GGTCCACATC TGGAAGATCT TCCACTCCGA CCTCGACCAG CTCCTCCTCT 
TTGGTGTCGT CAGCATGTTC GGATGAGGAA CTGGACGAGG AACTCTTGCA TATAATTTCC 
AACAGTATGC CTATGGACTG TTCCACTCTG GACAAGGACT TTGAAGCATT TAACGCCAAC 
TCAGGATCTC ATTTTGACTT CCCAGATTAC TGCACTCCAG AGGTGAATGA AATGATTTCT 
GGAGACTTGC TCGTGCCCAG CATCTCAGAC CTAGTGTTCA CCTACTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.
Nature genetics47(6)625-31(2015 Jun)
Wang Y,Lu Y,Zhang Y,Ning Z,Li Y,Zhao Q,Lu H,Huang R,Xia X,Feng Q,Liang X,Liu K,Zhang L,Lu T,Huang T,Fan D,Weng Q,Zhu C,Lu Y,Li W,Wen Z,Zhou C,Tian Q,Kang X,Shi M,Zhang W,Jang S,Du F,He S,Liao L,Li Y,Gui B,He H,Ning Z,Yang C,He L,Luo L,Yang R,Luo Q,Liu X,Li S,Huang W,Xiao L,Lin H,Han B,Zhu Z

Somatic mutagenesis with a Sleeping Beauty transposon system leads to solid tumor formation in zebrafish.
PloS one6(4)e18826(2011 Apr)
McGrail M,Hatler JM,Kuang X,Liao HK,Nannapaneni K,Watt KE,Uhl JD,Largaespada DA,Vollbrecht E,Scheetz TE,Dupuy AJ,Hostetter JM,Essner JJ

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sox12 cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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