SHROOM1 cDNA ORF clone, Danio rerio(Zebrafish)

The following SHROOM1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SHROOM1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODa26236 XM_682698.9
Latest version!
Danio rerio shroom family member 1 (shroom1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 25 $797.30
$1139.00
View Old Accession Versions >>
ODa26236 XM_682698.8 Danio rerio shroom family member 1 (shroom1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 25 $797.30
$1139.00
Hide Old Accession Versions >>

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID ODa26236
    Clone ID Related Accession (Same CDS sequence) XM_682698.9 , XM_682698.8
    Accession Version XM_682698.9 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4044bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2017-06-14
    Organism Danio rerio(zebrafish)
    Product protein Shroom3-like
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_682698.8. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    ATGGATTTTC ACTTTGAGAG GATGAGTAAC CTTGACCTAC ACCCGCTGAG TCTTCCGGTC 
    AGTCGACTGT CTCCGGCCAA GTCCAGCAGC AGTATTGATC AGTATACCCA CCACCACCAT
    AGCAAAGGAG ACTCTGCCTA TAGCTCGTTT TCGGGTGGCT CCACAGTCCC TGATTATCCT
    TCTCCTTTTC TACTGGATGA ACTCCAGTCA CAAAGCTTGC ACTACAATGA TCTGAAGCAT
    GTAAAAGCTA AATATAGCCC CACCGCTCTT GACTCGGATT CCAAGAGTAT GGACCAGCTG
    TACCGTTCAA TGGAGATTGT TTCCAAACCT CATTGGAGCA GTAGTGGCTT CCCTAAAATT
    GAAGATCCAC CACATCCCTT ACTACCACCA CCACCTCCAC CACCACCTGC TCGTCTGAAC
    AGTTTTGTAG CAACCAGAAA CCTTGAAAAC TTAAGGACAC GTCAAAGTCC AGAAGGACAG
    CATGCTGACA TTTCTACTTT ACAGCAGGCG AGTAGTCCAG AGGTTTATAG TGTCCAGGCT
    GACACACTTT CACAGCTTAA TGATCACCTT GATCATGGGG ACAAGATGCT TGATGCACCG
    AACCATACAG GAATTTTAAA CAGATCATCC CTGCAAACCT GTCAACCAGA TCCCTTGCAG
    CGCTCCAGGA ATGGCCATTC GGAAACCCAA CGGAAACGGT CACATTCAGC TTATTGTGCA
    CCAGTTTCTG AGCATCAAAG CTCTTGCAAT ATGCCACAAA ACATGATCAG TGGGAGCATT
    CAGCACAAAG GACAGTTTTA CTTTGTTACT GGCGTCTTCA AGTCTTCAGA GCCAAGCATC
    GAGCAAGATG ATGGTGCAGA TTTGGAAACC TCCACCGAGT GGTTTTATAA GGCTCAGCGG
    AGAAGGCAGA GCTGTCCGGA TGGTCCGAGT GGTAAACTCT TTTTCCAAGA GGAACACAAA
    TTTAGCATTC AAAATGAAGA TGTGGAGCAT CTTAATGACC AGGCGTTTTT TAGGCCAGAG
    CAGACTTGTG AAAGTGTAGA GGACCAGAAA GCCATGAGTA GAGAAACTGG CAGGCATCAC
    TCCACTAGCC ATCCTATCTT CTACTGTGGT CCTGAGGACA GTTCAGCTGG TGTAATAATG
    ACCCCTGCTC TAATTAAGGA AGACCATCTT AAGATTGAAG AAAGATTGGC AAGAGTTTCG
    AGGTGGCCTC AATTGGATAT TCCAAGTGAC AAGATCAGCA AAGAGACGAC TCCGCTTTTG
    TATCACCTCA CAGGAGCGAA CAGGGCATCC CATGCAGACA AACAGTTCAA AAACAATAAT
    GATACTGGTG TAGAGCTCAA GAATCCAGAA TGTGTTAAAG ATGAACCGAA AGCCGTCTAT
    GATGGGCAAA CCTCTCCCAG CAGTGAAAAG TCTAAAGAAG AGCAACCAAA TGAGTTTTTC
    TACCAATGCG CAACACTAGA TGACTCCTAC AAAAAATATT ACAAGGAGAA ACTGAAAGAT
    GTCCAGTCCA AGGTTTTAAG GGAGACCTCA TTTAAAAGAA GAGACTTGCA ACTTTCTCTT
    TCCCACAGAG TTAAGCAGTG GACAGACAAA AAACTTTCTG TCGTACCTTC AACCCCTTCA
    ACACTAGATC TACGACCCAA CTTGGACATC CACCCCACCC CACAAAAGCC TCAAGATACA
    GACCAGGAGA ACACTGGACA GGAGATTGAA AAGGAAACCG TAAAACCCAA GAAGCCACAG
    AATATTGCTC AACCGCAGGT ACCTCGGGTG GGGAGCAGGA AACGTTTGAC AGCAGATCAG
    AAAAAACTCT CCCACTCTGA GCCAGAGAAG CTACACCAGC TTGCAGATGG ACCATCTCAT
    ACGACCTGCC GCTCTCTTGG AAATGAATCT GAAGGTCTTC TCTCAGAGGC TGATCACGGT
    TTGGTGGCTT CACGGCGGAA GATGTTTGAA ACACGAGGCC GTGCTATGTC TGCTTCTAAC
    TTTTCAAAAT CATCTCTGAA GCACCTTCAG CATAAAGCTT TAGTAGCATA CATGGAGCGT
    AAAACTGGTC AAAAGGTTGC TGAACCTCAG CATCCAATTC CACAAGAGCC CACCCACTGG
    GATTACACTG TAGAGGGACA GTCTGAAAGG ATTGCCCAAC ACAATTCTGG CTCCAAGAAG
    CTCCAAAGAC CTCTTTCTGC AGGTCAGATT CTTGACTCTG TGTCCAGTTC TGTTAAATAC
    AGCCAGTTCA TCACTGATCA GTCCAGCGTT CATTCAAGGC AATCCAGCTG GAGAGAGAAG
    ACTCCTGCCA CAGGGAAATC TGCCTCCGTG GAGAGTCTCT TGGACCAGCC TGAACAACCA
    AAGCTCCCAC GGTCTCGCAG CACCTCGATT CCCCATGCTT TCCAGATTCA AAAGCATCCG
    GATGAGCTCT CGACCATAAA TAACAAGGCT ATGTCAAGCG CTCAAAGAAA AGTAGAAGGT
    AAAGCCATCC GTCAGAGTTA TCCTGCATCA GTTCCTGATG AGCGACGCTT TCAAGTCAGA
    GCTTCAAGAG GAAAGTCTAT GGAGGAACTC GGCGCGTCTG CCGTCACGAA ACCGGCAGCT
    CTCAGCAAAA GCTCAGAGCA ACTCGACCAG CATTTGGGAC ACAAGAGAAC TGTTTCATTC
    CTTGCTGAAG GAAGACGTGC ACACAGGAAC ATTCACAGCA GTACAGAAAA CACTCAGGCA
    GGTCCTGAGA ATCCATGGTT AACCAGTACT ATAAAGCACG AATCCTCCAA TGATGATGAA
    CGCCATGTGG TTTCACACAC TACACATAAA CATGTGGATT ACAGCATTGT GTCTGTGCCC
    AGTCCCTTAT CTGAACACGG TGGAATAAAG CTGGATATCA GAAAAGAGCA AGATTGTTTT
    CCTCAAGATG AGAATGAAGC CTCTGTCGTG TCCAATGAAG AAGTTTCTCT CAGTCATGGA
    GTCACTACAG ATCCCAGTCT GTGGATTTCT GCCATCGAGA TAAGTGAGGA AGAGCCAAAA
    ATCTGTCCGT CTACTGAAAC TACAACATTT GGTGAACCTC AAAATCCACC GCCTGCCTCA
    TCTGCTGAAA ACCACGAACC CACATCCATC CCAAATCATG CTGAAATCCA GGAGGTTTTG
    GAGTCTGTAG GGGAACCTGA GGAAGACGAT GTGAAAAGTG ATGAAGATGA CCCTAAAAAC
    AACACTGAAG GGAATTTGCT GGAGTGGGAG GTTCTGGTTC AGGAAGTGGT CTCAGCCGAC
    CAATCGTTAG CTCGCACGCT TTTTCCGGTA GCCAATAGGA AGACGGCACT GATGCTGATG
    GAGCAGCTGC TGTCTGAGGA TACTCTTCTG ATGGAGGAGC ACTACAAGAA CAAACACCAG
    CAGATGCTTC ACAACCCAGA GAAGGACACA CACTGCTCTG AGATGCCTGT TGGTGATGAT
    CTACCAAAAC ATCTGTCATC TGTGAACAAA AACTCTGCTA TCAAATACCA AAAAGATGTA
    CAGTGCAACA CTGAAATGGA TATCGTCAGT AAAAAGAAGC AGCTCATGGC GCATATAAAG
    CATCAGTTGA AGAGTCTGGA GGACGTGCGC TCTGCCGTCC AGGCTGAGGA GAAGGCGAAC
    GGTGCACGCG GAGAGGCCGT ACAGGCGCTG GTAGGACTCT GCTGCATCCC AGCCGAGCTG
    GAGCGATACA CACAGTTCAT AGGAGACCTG GAGCGAGTGC TGAGTCTGCT GCTGTGCCTG
    TCCGCCCGGC TGGCCCGCGT ACAAAATGCC CTCAGCACTG TGGACGACAG CATTGACGCC
    GAGGAGAAAC AATCTCTGGA CAGCCGCTAC CGTCTCCTGT GCAAACAGCG GGACGACGCC
    AAAGACTTGA AGGATAACCT CGACCGGCGG GAGCGCCTGG TGTCCGGCAT CCTCTGCAAA
    CAGCTGACGG ACACACAGAT GCAGGAGTAC CGGCGCTTCA TCCAGACCAA AGCCTCGCTC
    CTCATCCGAC TCAAAGACCT GGACGAGAAG CAGCGTCTGG GAGAAGAGCA GCTGGAGGCT
    TTACTCTGCA GTTTACCTCT GTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_687790.6
    CDS215..4258
    Translation

    Target ORF information:

    RefSeq Version XM_682698.9
    Organism Danio rerio(zebrafish)
    Definition Danio rerio shroom family member 1 (shroom1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_682698.9

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    ATGGATTTTC ACTTTGAGAG GATGAGTAAC CTTGACCTAC ACCCGCTGAG TCTTCCGGTC 
    AGTCGACTGT CTCCGGCCAA GTCCAGCAGC AGTATTGATC AGTATACCCA CCACCACCAT
    AGCAAAGGAG ACTCTGCCTA TAGCTCGTTT TCGGGTGGCT CCACAGTCCC TGATTATCCT
    TCTCCTTTTC TACTGGATGA ACTCCAGTCA CAAAGCTTGC ACTACAATGA TCTGAAGCAT
    GTAAAAGCTA AATATAGCCC CACCGCTCTT GACTCGGATT CCAAGAGTAT GGACCAGCTG
    TACCGTTCAA TGGAGATTGT TTCCAAACCT CATTGGAGCA GTAGTGGCTT CCCTAAAATT
    GAAGATCCAC CACATCCCTT ACTACCACCA CCACCTCCAC CACCACCTGC TCGTCTGAAC
    AGTTTTGTAG CAACCAGAAA CCTTGAAAAC TTAAGGACAC GTCAAAGTCC AGAAGGACAG
    CATGCTGACA TTTCTACTTT ACAGCAGGCG AGTAGTCCAG AGGTTTATAG TGTCCAGGCT
    GACACACTTT CACAGCTTAA TGATCACCTT GATCATGGGG ACAAGATGCT TGATGCACCG
    AACCATACAG GAATTTTAAA CAGATCATCC CTGCAAACCT GTCAACCAGA TCCCTTGCAG
    CGCTCCAGGA ATGGCCATTC GGAAACCCAA CGGAAACGGT CACATTCAGC TTATTGTGCA
    CCAGTTTCTG AGCATCAAAG CTCTTGCAAT ATGCCACAAA ACATGATCAG TGGGAGCATT
    CAGCACAAAG GACAGTTTTA CTTTGTTACT GGCGTCTTCA AGTCTTCAGA GCCAAGCATC
    GAGCAAGATG ATGGTGCAGA TTTGGAAACC TCCACCGAGT GGTTTTATAA GGCTCAGCGG
    AGAAGGCAGA GCTGTCCGGA TGGTCCGAGT GGTAAACTCT TTTTCCAAGA GGAACACAAA
    TTTAGCATTC AAAATGAAGA TGTGGAGCAT CTTAATGACC AGGCGTTTTT TAGGCCAGAG
    CAGACTTGTG AAAGTGTAGA GGACCAGAAA GCCATGAGTA GAGAAACTGG CAGGCATCAC
    TCCACTAGCC ATCCTATCTT CTACTGTGGT CCTGAGGACA GTTCAGCTGG TGTAATAATG
    ACCCCTGCTC TAATTAAGGA AGACCATCTT AAGATTGAAG AAAGATTGGC AAGAGTTTCG
    AGGTGGCCTC AATTGGATAT TCCAAGTGAC AAGATCAGCA AAGAGACGAC TCCGCTTTTG
    TATCACCTCA CAGGAGCGAA CAGGGCATCC CATGCAGACA AACAGTTCAA AAACAATAAT
    GATACTGGTG TAGAGCTCAA GAATCCAGAA TGTGTTAAAG ATGAACCGAA AGCCGTCTAT
    GATGGGCAAA CCTCTCCCAG CAGTGAAAAG TCTAAAGAAG AGCAACCAAA TGAGTTTTTC
    TACCAATGCG CAACACTAGA TGACTCCTAC AAAAAATATT ACAAGGAGAA ACTGAAAGAT
    GTCCAGTCCA AGGTTTTAAG GGAGACCTCA TTTAAAAGAA GAGACTTGCA ACTTTCTCTT
    TCCCACAGAG TTAAGCAGTG GACAGACAAA AAACTTTCTG TCGTACCTTC AACCCCTTCA
    ACACTAGATC TACGACCCAA CTTGGACATC CACCCCACCC CACAAAAGCC TCAAGATACA
    GACCAGGAGA ACACTGGACA GGAGATTGAA AAGGAAACCG TAAAACCCAA GAAGCCACAG
    AATATTGCTC AACCGCAGGT ACCTCGGGTG GGGAGCAGGA AACGTTTGAC AGCAGATCAG
    AAAAAACTCT CCCACTCTGA GCCAGAGAAG CTACACCAGC TTGCAGATGG ACCATCTCAT
    ACGACCTGCC GCTCTCTTGG AAATGAATCT GAAGGTCTTC TCTCAGAGGC TGATCACGGT
    TTGGTGGCTT CACGGCGGAA GATGTTTGAA ACACGAGGCC GTGCTATGTC TGCTTCTAAC
    TTTTCAAAAT CATCTCTGAA GCACCTTCAG CATAAAGCTT TAGTAGCATA CATGGAGCGT
    AAAACTGGTC AAAAGGTTGC TGAACCTCAG CATCCAATTC CACAAGAGCC CACCCACTGG
    GATTACACTG TAGAGGGACA GTCTGAAAGG ATTGCCCAAC ACAATTCTGG CTCCAAGAAG
    CTCCAAAGAC CTCTTTCTGC AGGTCAGATT CTTGACTCTG TGTCCAGTTC TGTTAAATAC
    AGCCAGTTCA TCACTGATCA GTCCAGCGTT CATTCAAGGC AATCCAGCTG GAGAGAGAAG
    ACTCCTGCCA CAGGGAAATC TGCCTCCGTG GAGAGTCTCT TGGACCAGCC TGAACAACCA
    AAGCTCCCAC GGTCTCGCAG CACCTCGATT CCCCATGCTT TCCAGATTCA AAAGCATCCG
    GATGAGCTCT CGACCATAAA TAACAAGGCT ATGTCAAGCG CTCAAAGAAA AGTAGAAGGT
    AAAGCCATCC GTCAGAGTTA TCCTGCATCA GTTCCTGATG AGCGACGCTT TCAAGTCAGA
    GCTTCAAGAG GAAAGTCTAT GGAGGAACTC GGCGCGTCTG CCGTCACGAA ACCGGCAGCT
    CTCAGCAAAA GCTCAGAGCA ACTCGACCAG CATTTGGGAC ACAAGAGAAC TGTTTCATTC
    CTTGCTGAAG GAAGACGTGC ACACAGGAAC ATTCACAGCA GTACAGAAAA CACTCAGGCA
    GGTCCTGAGA ATCCATGGTT AACCAGTACT ATAAAGCACG AATCCTCCAA TGATGATGAA
    CGCCATGTGG TTTCACACAC TACACATAAA CATGTGGATT ACAGCATTGT GTCTGTGCCC
    AGTCCCTTAT CTGAACACGG TGGAATAAAG CTGGATATCA GAAAAGAGCA AGATTGTTTT
    CCTCAAGATG AGAATGAAGC CTCTGTCGTG TCCAATGAAG AAGTTTCTCT CAGTCATGGA
    GTCACTACAG ATCCCAGTCT GTGGATTTCT GCCATCGAGA TAAGTGAGGA AGAGCCAAAA
    ATCTGTCCGT CTACTGAAAC TACAACATTT GGTGAACCTC AAAATCCACC GCCTGCCTCA
    TCTGCTGAAA ACCACGAACC CACATCCATC CCAAATCATG CTGAAATCCA GGAGGTTTTG
    GAGTCTGTAG GGGAACCTGA GGAAGACGAT GTGAAAAGTG ATGAAGATGA CCCTAAAAAC
    AACACTGAAG GGAATTTGCT GGAGTGGGAG GTTCTGGTTC AGGAAGTGGT CTCAGCCGAC
    CAATCGTTAG CTCGCACGCT TTTTCCGGTA GCCAATAGGA AGACGGCACT GATGCTGATG
    GAGCAGCTGC TGTCTGAGGA TACTCTTCTG ATGGAGGAGC ACTACAAGAA CAAACACCAG
    CAGATGCTTC ACAACCCAGA GAAGGACACA CACTGCTCTG AGATGCCTGT TGGTGATGAT
    CTACCAAAAC ATCTGTCATC TGTGAACAAA AACTCTGCTA TCAAATACCA AAAAGATGTA
    CAGTGCAACA CTGAAATGGA TATCGTCAGT AAAAAGAAGC AGCTCATGGC GCATATAAAG
    CATCAGTTGA AGAGTCTGGA GGACGTGCGC TCTGCCGTCC AGGCTGAGGA GAAGGCGAAC
    GGTGCACGCG GAGAGGCCGT ACAGGCGCTG GTAGGACTCT GCTGCATCCC AGCCGAGCTG
    GAGCGATACA CACAGTTCAT AGGAGACCTG GAGCGAGTGC TGAGTCTGCT GCTGTGCCTG
    TCCGCCCGGC TGGCCCGCGT ACAAAATGCC CTCAGCACTG TGGACGACAG CATTGACGCC
    GAGGAGAAAC AATCTCTGGA CAGCCGCTAC CGTCTCCTGT GCAAACAGCG GGACGACGCC
    AAAGACTTGA AGGATAACCT CGACCGGCGG GAGCGCCTGG TGTCCGGCAT CCTCTGCAAA
    CAGCTGACGG ACACACAGAT GCAGGAGTAC CGGCGCTTCA TCCAGACCAA AGCCTCGCTC
    CTCATCCGAC TCAAAGACCT GGACGAGAAG CAGCGTCTGG GAGAAGAGCA GCTGGAGGCT
    TTACTCTGCA GTTTACCTCT GTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID ODa26236
    Clone ID Related Accession (Same CDS sequence) XM_682698.9 , XM_682698.8
    Accession Version XM_682698.8 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4044bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-06-23
    Organism Danio rerio(Zebrafish)
    Product protein Shroom3-like
    Comment MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007132.6) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XM_682698.7. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    ATGGATTTTC ACTTTGAGAG GATGAGTAAC CTTGACCTAC ACCCGCTGAG TCTTCCGGTC 
    AGTCGACTGT CTCCGGCCAA GTCCAGCAGC AGTATTGATC AGTATACCCA CCACCACCAT
    AGCAAAGGAG ACTCTGCCTA TAGCTCGTTT TCGGGTGGCT CCACAGTCCC TGATTATCCT
    TCTCCTTTTC TACTGGATGA ACTCCAGTCA CAAAGCTTGC ACTACAATGA TCTGAAGCAT
    GTAAAAGCTA AATATAGCCC CACCGCTCTT GACTCGGATT CCAAGAGTAT GGACCAGCTG
    TACCGTTCAA TGGAGATTGT TTCCAAACCT CATTGGAGCA GTAGTGGCTT CCCTAAAATT
    GAAGATCCAC CACATCCCTT ACTACCACCA CCACCTCCAC CACCACCTGC TCGTCTGAAC
    AGTTTTGTAG CAACCAGAAA CCTTGAAAAC TTAAGGACAC GTCAAAGTCC AGAAGGACAG
    CATGCTGACA TTTCTACTTT ACAGCAGGCG AGTAGTCCAG AGGTTTATAG TGTCCAGGCT
    GACACACTTT CACAGCTTAA TGATCACCTT GATCATGGGG ACAAGATGCT TGATGCACCG
    AACCATACAG GAATTTTAAA CAGATCATCC CTGCAAACCT GTCAACCAGA TCCCTTGCAG
    CGCTCCAGGA ATGGCCATTC GGAAACCCAA CGGAAACGGT CACATTCAGC TTATTGTGCA
    CCAGTTTCTG AGCATCAAAG CTCTTGCAAT ATGCCACAAA ACATGATCAG TGGGAGCATT
    CAGCACAAAG GACAGTTTTA CTTTGTTACT GGCGTCTTCA AGTCTTCAGA GCCAAGCATC
    GAGCAAGATG ATGGTGCAGA TTTGGAAACC TCCACCGAGT GGTTTTATAA GGCTCAGCGG
    AGAAGGCAGA GCTGTCCGGA TGGTCCGAGT GGTAAACTCT TTTTCCAAGA GGAACACAAA
    TTTAGCATTC AAAATGAAGA TGTGGAGCAT CTTAATGACC AGGCGTTTTT TAGGCCAGAG
    CAGACTTGTG AAAGTGTAGA GGACCAGAAA GCCATGAGTA GAGAAACTGG CAGGCATCAC
    TCCACTAGCC ATCCTATCTT CTACTGTGGT CCTGAGGACA GTTCAGCTGG TGTAATAATG
    ACCCCTGCTC TAATTAAGGA AGACCATCTT AAGATTGAAG AAAGATTGGC AAGAGTTTCG
    AGGTGGCCTC AATTGGATAT TCCAAGTGAC AAGATCAGCA AAGAGACGAC TCCGCTTTTG
    TATCACCTCA CAGGAGCGAA CAGGGCATCC CATGCAGACA AACAGTTCAA AAACAATAAT
    GATACTGGTG TAGAGCTCAA GAATCCAGAA TGTGTTAAAG ATGAACCGAA AGCCGTCTAT
    GATGGGCAAA CCTCTCCCAG CAGTGAAAAG TCTAAAGAAG AGCAACCAAA TGAGTTTTTC
    TACCAATGCG CAACACTAGA TGACTCCTAC AAAAAATATT ACAAGGAGAA ACTGAAAGAT
    GTCCAGTCCA AGGTTTTAAG GGAGACCTCA TTTAAAAGAA GAGACTTGCA ACTTTCTCTT
    TCCCACAGAG TTAAGCAGTG GACAGACAAA AAACTTTCTG TCGTACCTTC AACCCCTTCA
    ACACTAGATC TACGACCCAA CTTGGACATC CACCCCACCC CACAAAAGCC TCAAGATACA
    GACCAGGAGA ACACTGGACA GGAGATTGAA AAGGAAACCG TAAAACCCAA GAAGCCACAG
    AATATTGCTC AACCGCAGGT ACCTCGGGTG GGGAGCAGGA AACGTTTGAC AGCAGATCAG
    AAAAAACTCT CCCACTCTGA GCCAGAGAAG CTACACCAGC TTGCAGATGG ACCATCTCAT
    ACGACCTGCC GCTCTCTTGG AAATGAATCT GAAGGTCTTC TCTCAGAGGC TGATCACGGT
    TTGGTGGCTT CACGGCGGAA GATGTTTGAA ACACGAGGCC GTGCTATGTC TGCTTCTAAC
    TTTTCAAAAT CATCTCTGAA GCACCTTCAG CATAAAGCTT TAGTAGCATA CATGGAGCGT
    AAAACTGGTC AAAAGGTTGC TGAACCTCAG CATCCAATTC CACAAGAGCC CACCCACTGG
    GATTACACTG TAGAGGGACA GTCTGAAAGG ATTGCCCAAC ACAATTCTGG CTCCAAGAAG
    CTCCAAAGAC CTCTTTCTGC AGGTCAGATT CTTGACTCTG TGTCCAGTTC TGTTAAATAC
    AGCCAGTTCA TCACTGATCA GTCCAGCGTT CATTCAAGGC AATCCAGCTG GAGAGAGAAG
    ACTCCTGCCA CAGGGAAATC TGCCTCCGTG GAGAGTCTCT TGGACCAGCC TGAACAACCA
    AAGCTCCCAC GGTCTCGCAG CACCTCGATT CCCCATGCTT TCCAGATTCA AAAGCATCCG
    GATGAGCTCT CGACCATAAA TAACAAGGCT ATGTCAAGCG CTCAAAGAAA AGTAGAAGGT
    AAAGCCATCC GTCAGAGTTA TCCTGCATCA GTTCCTGATG AGCGACGCTT TCAAGTCAGA
    GCTTCAAGAG GAAAGTCTAT GGAGGAACTC GGCGCGTCTG CCGTCACGAA ACCGGCAGCT
    CTCAGCAAAA GCTCAGAGCA ACTCGACCAG CATTTGGGAC ACAAGAGAAC TGTTTCATTC
    CTTGCTGAAG GAAGACGTGC ACACAGGAAC ATTCACAGCA GTACAGAAAA CACTCAGGCA
    GGTCCTGAGA ATCCATGGTT AACCAGTACT ATAAAGCACG AATCCTCCAA TGATGATGAA
    CGCCATGTGG TTTCACACAC TACACATAAA CATGTGGATT ACAGCATTGT GTCTGTGCCC
    AGTCCCTTAT CTGAACACGG TGGAATAAAG CTGGATATCA GAAAAGAGCA AGATTGTTTT
    CCTCAAGATG AGAATGAAGC CTCTGTCGTG TCCAATGAAG AAGTTTCTCT CAGTCATGGA
    GTCACTACAG ATCCCAGTCT GTGGATTTCT GCCATCGAGA TAAGTGAGGA AGAGCCAAAA
    ATCTGTCCGT CTACTGAAAC TACAACATTT GGTGAACCTC AAAATCCACC GCCTGCCTCA
    TCTGCTGAAA ACCACGAACC CACATCCATC CCAAATCATG CTGAAATCCA GGAGGTTTTG
    GAGTCTGTAG GGGAACCTGA GGAAGACGAT GTGAAAAGTG ATGAAGATGA CCCTAAAAAC
    AACACTGAAG GGAATTTGCT GGAGTGGGAG GTTCTGGTTC AGGAAGTGGT CTCAGCCGAC
    CAATCGTTAG CTCGCACGCT TTTTCCGGTA GCCAATAGGA AGACGGCACT GATGCTGATG
    GAGCAGCTGC TGTCTGAGGA TACTCTTCTG ATGGAGGAGC ACTACAAGAA CAAACACCAG
    CAGATGCTTC ACAACCCAGA GAAGGACACA CACTGCTCTG AGATGCCTGT TGGTGATGAT
    CTACCAAAAC ATCTGTCATC TGTGAACAAA AACTCTGCTA TCAAATACCA AAAAGATGTA
    CAGTGCAACA CTGAAATGGA TATCGTCAGT AAAAAGAAGC AGCTCATGGC GCATATAAAG
    CATCAGTTGA AGAGTCTGGA GGACGTGCGC TCTGCCGTCC AGGCTGAGGA GAAGGCGAAC
    GGTGCACGCG GAGAGGCCGT ACAGGCGCTG GTAGGACTCT GCTGCATCCC AGCCGAGCTG
    GAGCGATACA CACAGTTCAT AGGAGACCTG GAGCGAGTGC TGAGTCTGCT GCTGTGCCTG
    TCCGCCCGGC TGGCCCGCGT ACAAAATGCC CTCAGCACTG TGGACGACAG CATTGACGCC
    GAGGAGAAAC AATCTCTGGA CAGCCGCTAC CGTCTCCTGT GCAAACAGCG GGACGACGCC
    AAAGACTTGA AGGATAACCT CGACCGGCGG GAGCGCCTGG TGTCCGGCAT CCTCTGCAAA
    CAGCTGACGG ACACACAGAT GCAGGAGTAC CGGCGCTTCA TCCAGACCAA AGCCTCGCTC
    CTCATCCGAC TCAAAGACCT GGACGAGAAG CAGCGTCTGG GAGAAGAGCA GCTGGAGGCT
    TTACTCTGCA GTTTACCTCT GTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_687790.6
    CDS203..4246
    Translation

    Target ORF information:

    RefSeq Version XM_682698.8
    Organism Danio rerio(Zebrafish)
    Definition Danio rerio shroom family member 1 (shroom1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_682698.8

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    ATGGATTTTC ACTTTGAGAG GATGAGTAAC CTTGACCTAC ACCCGCTGAG TCTTCCGGTC 
    AGTCGACTGT CTCCGGCCAA GTCCAGCAGC AGTATTGATC AGTATACCCA CCACCACCAT
    AGCAAAGGAG ACTCTGCCTA TAGCTCGTTT TCGGGTGGCT CCACAGTCCC TGATTATCCT
    TCTCCTTTTC TACTGGATGA ACTCCAGTCA CAAAGCTTGC ACTACAATGA TCTGAAGCAT
    GTAAAAGCTA AATATAGCCC CACCGCTCTT GACTCGGATT CCAAGAGTAT GGACCAGCTG
    TACCGTTCAA TGGAGATTGT TTCCAAACCT CATTGGAGCA GTAGTGGCTT CCCTAAAATT
    GAAGATCCAC CACATCCCTT ACTACCACCA CCACCTCCAC CACCACCTGC TCGTCTGAAC
    AGTTTTGTAG CAACCAGAAA CCTTGAAAAC TTAAGGACAC GTCAAAGTCC AGAAGGACAG
    CATGCTGACA TTTCTACTTT ACAGCAGGCG AGTAGTCCAG AGGTTTATAG TGTCCAGGCT
    GACACACTTT CACAGCTTAA TGATCACCTT GATCATGGGG ACAAGATGCT TGATGCACCG
    AACCATACAG GAATTTTAAA CAGATCATCC CTGCAAACCT GTCAACCAGA TCCCTTGCAG
    CGCTCCAGGA ATGGCCATTC GGAAACCCAA CGGAAACGGT CACATTCAGC TTATTGTGCA
    CCAGTTTCTG AGCATCAAAG CTCTTGCAAT ATGCCACAAA ACATGATCAG TGGGAGCATT
    CAGCACAAAG GACAGTTTTA CTTTGTTACT GGCGTCTTCA AGTCTTCAGA GCCAAGCATC
    GAGCAAGATG ATGGTGCAGA TTTGGAAACC TCCACCGAGT GGTTTTATAA GGCTCAGCGG
    AGAAGGCAGA GCTGTCCGGA TGGTCCGAGT GGTAAACTCT TTTTCCAAGA GGAACACAAA
    TTTAGCATTC AAAATGAAGA TGTGGAGCAT CTTAATGACC AGGCGTTTTT TAGGCCAGAG
    CAGACTTGTG AAAGTGTAGA GGACCAGAAA GCCATGAGTA GAGAAACTGG CAGGCATCAC
    TCCACTAGCC ATCCTATCTT CTACTGTGGT CCTGAGGACA GTTCAGCTGG TGTAATAATG
    ACCCCTGCTC TAATTAAGGA AGACCATCTT AAGATTGAAG AAAGATTGGC AAGAGTTTCG
    AGGTGGCCTC AATTGGATAT TCCAAGTGAC AAGATCAGCA AAGAGACGAC TCCGCTTTTG
    TATCACCTCA CAGGAGCGAA CAGGGCATCC CATGCAGACA AACAGTTCAA AAACAATAAT
    GATACTGGTG TAGAGCTCAA GAATCCAGAA TGTGTTAAAG ATGAACCGAA AGCCGTCTAT
    GATGGGCAAA CCTCTCCCAG CAGTGAAAAG TCTAAAGAAG AGCAACCAAA TGAGTTTTTC
    TACCAATGCG CAACACTAGA TGACTCCTAC AAAAAATATT ACAAGGAGAA ACTGAAAGAT
    GTCCAGTCCA AGGTTTTAAG GGAGACCTCA TTTAAAAGAA GAGACTTGCA ACTTTCTCTT
    TCCCACAGAG TTAAGCAGTG GACAGACAAA AAACTTTCTG TCGTACCTTC AACCCCTTCA
    ACACTAGATC TACGACCCAA CTTGGACATC CACCCCACCC CACAAAAGCC TCAAGATACA
    GACCAGGAGA ACACTGGACA GGAGATTGAA AAGGAAACCG TAAAACCCAA GAAGCCACAG
    AATATTGCTC AACCGCAGGT ACCTCGGGTG GGGAGCAGGA AACGTTTGAC AGCAGATCAG
    AAAAAACTCT CCCACTCTGA GCCAGAGAAG CTACACCAGC TTGCAGATGG ACCATCTCAT
    ACGACCTGCC GCTCTCTTGG AAATGAATCT GAAGGTCTTC TCTCAGAGGC TGATCACGGT
    TTGGTGGCTT CACGGCGGAA GATGTTTGAA ACACGAGGCC GTGCTATGTC TGCTTCTAAC
    TTTTCAAAAT CATCTCTGAA GCACCTTCAG CATAAAGCTT TAGTAGCATA CATGGAGCGT
    AAAACTGGTC AAAAGGTTGC TGAACCTCAG CATCCAATTC CACAAGAGCC CACCCACTGG
    GATTACACTG TAGAGGGACA GTCTGAAAGG ATTGCCCAAC ACAATTCTGG CTCCAAGAAG
    CTCCAAAGAC CTCTTTCTGC AGGTCAGATT CTTGACTCTG TGTCCAGTTC TGTTAAATAC
    AGCCAGTTCA TCACTGATCA GTCCAGCGTT CATTCAAGGC AATCCAGCTG GAGAGAGAAG
    ACTCCTGCCA CAGGGAAATC TGCCTCCGTG GAGAGTCTCT TGGACCAGCC TGAACAACCA
    AAGCTCCCAC GGTCTCGCAG CACCTCGATT CCCCATGCTT TCCAGATTCA AAAGCATCCG
    GATGAGCTCT CGACCATAAA TAACAAGGCT ATGTCAAGCG CTCAAAGAAA AGTAGAAGGT
    AAAGCCATCC GTCAGAGTTA TCCTGCATCA GTTCCTGATG AGCGACGCTT TCAAGTCAGA
    GCTTCAAGAG GAAAGTCTAT GGAGGAACTC GGCGCGTCTG CCGTCACGAA ACCGGCAGCT
    CTCAGCAAAA GCTCAGAGCA ACTCGACCAG CATTTGGGAC ACAAGAGAAC TGTTTCATTC
    CTTGCTGAAG GAAGACGTGC ACACAGGAAC ATTCACAGCA GTACAGAAAA CACTCAGGCA
    GGTCCTGAGA ATCCATGGTT AACCAGTACT ATAAAGCACG AATCCTCCAA TGATGATGAA
    CGCCATGTGG TTTCACACAC TACACATAAA CATGTGGATT ACAGCATTGT GTCTGTGCCC
    AGTCCCTTAT CTGAACACGG TGGAATAAAG CTGGATATCA GAAAAGAGCA AGATTGTTTT
    CCTCAAGATG AGAATGAAGC CTCTGTCGTG TCCAATGAAG AAGTTTCTCT CAGTCATGGA
    GTCACTACAG ATCCCAGTCT GTGGATTTCT GCCATCGAGA TAAGTGAGGA AGAGCCAAAA
    ATCTGTCCGT CTACTGAAAC TACAACATTT GGTGAACCTC AAAATCCACC GCCTGCCTCA
    TCTGCTGAAA ACCACGAACC CACATCCATC CCAAATCATG CTGAAATCCA GGAGGTTTTG
    GAGTCTGTAG GGGAACCTGA GGAAGACGAT GTGAAAAGTG ATGAAGATGA CCCTAAAAAC
    AACACTGAAG GGAATTTGCT GGAGTGGGAG GTTCTGGTTC AGGAAGTGGT CTCAGCCGAC
    CAATCGTTAG CTCGCACGCT TTTTCCGGTA GCCAATAGGA AGACGGCACT GATGCTGATG
    GAGCAGCTGC TGTCTGAGGA TACTCTTCTG ATGGAGGAGC ACTACAAGAA CAAACACCAG
    CAGATGCTTC ACAACCCAGA GAAGGACACA CACTGCTCTG AGATGCCTGT TGGTGATGAT
    CTACCAAAAC ATCTGTCATC TGTGAACAAA AACTCTGCTA TCAAATACCA AAAAGATGTA
    CAGTGCAACA CTGAAATGGA TATCGTCAGT AAAAAGAAGC AGCTCATGGC GCATATAAAG
    CATCAGTTGA AGAGTCTGGA GGACGTGCGC TCTGCCGTCC AGGCTGAGGA GAAGGCGAAC
    GGTGCACGCG GAGAGGCCGT ACAGGCGCTG GTAGGACTCT GCTGCATCCC AGCCGAGCTG
    GAGCGATACA CACAGTTCAT AGGAGACCTG GAGCGAGTGC TGAGTCTGCT GCTGTGCCTG
    TCCGCCCGGC TGGCCCGCGT ACAAAATGCC CTCAGCACTG TGGACGACAG CATTGACGCC
    GAGGAGAAAC AATCTCTGGA CAGCCGCTAC CGTCTCCTGT GCAAACAGCG GGACGACGCC
    AAAGACTTGA AGGATAACCT CGACCGGCGG GAGCGCCTGG TGTCCGGCAT CCTCTGCAAA
    CAGCTGACGG ACACACAGAT GCAGGAGTAC CGGCGCTTCA TCCAGACCAA AGCCTCGCTC
    CTCATCCGAC TCAAAGACCT GGACGAGAAG CAGCGTCTGG GAGAAGAGCA GCTGGAGGCT
    TTACTCTGCA GTTTACCTCT GTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.