LOC109712406 cDNA ORF clone, Ananas comosus(pineapple)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC109712406
Entrez Gene ID	109712406
Full Name	pentatricopeptide repeat-containing protein At1g09900
Gene Type	protein-coding
Organism	Ananas comosus(pineapple)

mRNA and Protein(s)

mRNA	Protein	Name
XM_020235957.1	XP_020091546.1	pentatricopeptide repeat-containing protein At1g09900

Pathways from BioSystems
Gene Ontology

The following LOC109712406 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC109712406 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAn67343	XM_020235957.1 Latest version!	Ananas comosus pentatricopeptide repeat-containing protein At1g09900 (LOC109712406), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC109712406 ( XM_020235957.1 ) cDNA ORF clone, Ananas comosus(pineapple) -> XP_020091546.1 Ananas comosus pentatricopeptide repeat-containing protein At1g09900 (LOC109712406), mRNA.

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CloneID	OAn67343
Clone ID Related Accession (Same CDS sequence)	XM_020235957.1
Accession Version	XM_020235957.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2439bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-02-14
Organism	Ananas comosus(pineapple)
Product	pentatricopeptide repeat-containing protein At1g09900
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_033627.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ananas comosus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCTTAAAA CCCTAGGAAG GGGTTTCAAA TCAACTCTAT TCGCTCTATC AAACAACAAT 
CTCAAATCCA AGAACATAGC AACTCCACAA ACCCTTATCA GTTTTATACC CAATTTCGAC 
GCGTCTTCTC CGAATTTCCG TTATAAAAAC GCCACCTTTT TCTCCTCCGC TTCATGCTCC 
TCCTCAGATC TAAGGCCCAA GCTTGGCGAT TCAAATGCAT CTTCTACGCA CTCTAATGAT 
CTCAAAGACG ACGATGCTCG GTTCGGTGCC TCAGTTTTGA GTGATGATCT CGACGAAGAA 
GATGAGTCGG AATGTGGAAG CAACGACGAC GACGACAATG GGTTTGGCGC TTTGGATTTG 
TTCGATAAAA ATGCCGCGTC CAAGGACGAG AAGAAGAGTT ACAAGGAAGA AGATGATGAA 
GAAGAAGAAG AAAAGGATGA ATCAAGAAAC CCTATAGTGA GAGAGATATG CAGGTTGATC 
GATCTCCGCC ACGCGTGGAA TCCGCAAATG GAGAGCCAGC TTCGGCTCCT GCTACGAAGC 
CTAAAACCCC GGCAAGTCTC CGCGGTCCTC CGATCGCAGC GAGACGAGCG CGCAGCCGTA 
AGCTTCTTCT ACTGGGCCGA TCGGCAGTGG CGGTACCGCC ATGCCCCCGA GGTGTTCGAC 
GTAATGCTCC AGCTGCTTAG CAAGACTAAA CTGTGCGAGG CCTCGCGGCG GATCATGAGG 
CTCATGATCC GCCGCGGGCT AAGTAGGCGG CCCGAGCATT TCGCATGTTT GATGCTCTCC 
TACAGCCGCG CGGGAAAGCT CAGGACCGCG ATGAGGGTTT TGAATCTGAT GCAGAAAGAT 
GGCTGCGCTC CGGACTTGAC CGTTTGTAAT GCGGCGATTC AGGTTCTTGT GATGGCCGGC 
CGGTTGGCGA AGGCGGTTAA GTTCTCGGAT CGCATGGAAA GGGTCGGAAT CAAGCCTAAT 
ATTATTACTT ACAATTCGCT GATAAAGGGG CTTTGCGATG CGGGAAGATA CGAAAATGCC 
CTAGTAATGA TTCAACAGAT GCCTCTCAGA GGTTGCTCGC CCGACAAGAT CACTTACTAC 
ACAGTGATGA ACTTCTTCTG CAAAGAGAAG AGGATGGGAG AGGTGAGAGA GTTGCTGGAG 
AGGATGAGAA TGGAGGCGAA TTTGATTCCT GATCAGGTAA CTTATATTAT GATAATTCAC 
GCATTAGCAA AGCATGGGCA CGCGGATGAG GCGCTTGAGT TTATGCGCGA GTCGGAGGAG 
AAAGGGTTCA GGATAGATGA GGTTGGATAT AGCTCCGTCG TGCATTCATT TTGTCAGAGT 
GGGAGGATGG AGGAGGCGAA GAATATCGTC ACCGAGATGA TTTCAAAAGG TTGCCTTCCT 
GATGTGGTGA CATATAGCGC GGTCATTGAC GGATTTTGCC GAATAGGGAA AATTGATCAA 
GCAAGAAAGA TGCTGAAGTA TATGTATAAG AATAATTGTA AGCCGAACAC GGTCACATAC 
ACTGCATTGT TGAACGGGTT GTGCCGAATT GGGAAATCAT CAGAAGCGTG GGAAATGCTC 
AATCGGAGCG AGGAGGAATG GTGGACGCCG AATAATATTT CGTATAGCGT CGTCATGCAC 
GGTTTGAGAA GAGAAGGGAA GCTGAAAGAG GCTTGTAATT TGGTCACGCA GATGCTGCGA 
AATGGATTCT TCCCCACACC GGCCGAGGTT AATTTACTTC TCCATGCACT GTGTAAAGAG 
GGTGACGTGG GAGAGGCGAA GAAGTTCATG GAGGAGTGTC AAAGCAAGGG TTGTGCCATT 
AATGTGATAA ATTTCACCAC CGTAATCCAT GGATTTTGCC AGGAAAATGA CTTGGGTTCA 
GCGCTTTCGT TGCTGGACGA CATGTATTTG AGCAATAGGC ATCCCGACGT TTACACTTAC 
ACGGTTATGA TTGATGCTTT GGGAAAGAAT GATCGGTTCG AAGAAGCAAC AGAGCTTGCA 
AAGAAGATGC TCCATAGAGG ATTGGTTCCT ACGCCCGTTA TGTATAGGAC AGTGATACAT 
AGATACTGCG AGAAGGGTAA GGTTGAAGAG TTACTGAAGT TGCTCGAGAA AATGCTGCAG 
AGAAAGGAGC TAAGAAGTGC ATACAACCAA GTGATTGAGA AGCTTTGTGC CTTGGGCAAA 
CCTGAAGAGG CTTACAAGAT TTTAGGGAAG GTTTTGAGAA CAGCCTCGAA GATCGATGGA 
CAAACATGCC ACATTTTGAT GGTGAGTTCT CTCAGGAGTG GTCTTCCACT GCAGTCGTAT 
GAAGTGGCGT GCCGAATGTT CCAGAGGAAC TTAATTCCTG ATGTTAAAGT GTGTCAAAAA 
GTTAAGGATA GGCTAGTCTT GGAGGGACAT GCGAATCACG GAGAAAAGCT TATGACTAAA 
TTTGTTGAGA GAGGGCTCCT TTCACCTCAG AACCAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_020091546.1
CDS	121..2559
Translation	MLKTLGRGFKSTLFALSNNNLKSKNIATPQTLISFIPNFDASSPNFRYKNATFFSSASCSSSDLRPKLGDSNASSTHSNDLKDDDARFGASVLSDDLDEEDESECGSNDDDDNGFGALDLFDKNAASKDEKKSYKEEDDEEEEEKDESRNPIVREICRLIDLRHAWNPQMESQLRLLLRSLKPRQVSAVLRSQRDERAAVSFFYWADRQWRYRHAPEVFDVMLQLLSKTKLCEASRRIMRLMIRRGLSRRPEHFACLMLSYSRAGKLRTAMRVLNLMQKDGCAPDLTVCNAAIQVLVMAGRLAKAVKFSDRMERVGIKPNIITYNSLIKGLCDAGRYENALVMIQQMPLRGCSPDKITYYTVMNFFCKEKRMGEVRELLERMRMEANLIPDQVTYIMIIHALAKHGHADEALEFMRESEEKGFRIDEVGYSSVVHSFCQSGRMEEAKNIVTEMISKGCLPDVVTYSAVIDGFCRIGKIDQARKMLKYMYKNNCKPNTVTYTALLNGLCRIGKSSEAWEMLNRSEEEWWTPNNISYSVVMHGLRREGKLKEACNLVTQMLRNGFFPTPAEVNLLLHALCKEGDVGEAKKFMEECQSKGCAINVINFTTVIHGFCQENDLGSALSLLDDMYLSNRHPDVYTYTVMIDALGKNDRFEEATELAKKMLHRGLVPTPVMYRTVIHRYCEKGKVEELLKLLEKMLQRKELRSAYNQVIEKLCALGKPEEAYKILGKVLRTASKIDGQTCHILMVSSLRSGLPLQSYEVACRMFQRNLIPDVKVCQKVKDRLVLEGHANHGEKLMTKFVERGLLSPQNQ

Target ORF information:

RefSeq Version	XM_020235957.1
Organism	Ananas comosus(pineapple)
Definition	Ananas comosus pentatricopeptide repeat-containing protein At1g09900 (LOC109712406), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_020235957.1

ORF Insert Sequence:

ATGCTTAAAA CCCTAGGAAG GGGTTTCAAA TCAACTCTAT TCGCTCTATC AAACAACAAT 
CTCAAATCCA AGAACATAGC AACTCCACAA ACCCTTATCA GTTTTATACC CAATTTCGAC 
GCGTCTTCTC CGAATTTCCG TTATAAAAAC GCCACCTTTT TCTCCTCCGC TTCATGCTCC 
TCCTCAGATC TAAGGCCCAA GCTTGGCGAT TCAAATGCAT CTTCTACGCA CTCTAATGAT 
CTCAAAGACG ACGATGCTCG GTTCGGTGCC TCAGTTTTGA GTGATGATCT CGACGAAGAA 
GATGAGTCGG AATGTGGAAG CAACGACGAC GACGACAATG GGTTTGGCGC TTTGGATTTG 
TTCGATAAAA ATGCCGCGTC CAAGGACGAG AAGAAGAGTT ACAAGGAAGA AGATGATGAA 
GAAGAAGAAG AAAAGGATGA ATCAAGAAAC CCTATAGTGA GAGAGATATG CAGGTTGATC 
GATCTCCGCC ACGCGTGGAA TCCGCAAATG GAGAGCCAGC TTCGGCTCCT GCTACGAAGC 
CTAAAACCCC GGCAAGTCTC CGCGGTCCTC CGATCGCAGC GAGACGAGCG CGCAGCCGTA 
AGCTTCTTCT ACTGGGCCGA TCGGCAGTGG CGGTACCGCC ATGCCCCCGA GGTGTTCGAC 
GTAATGCTCC AGCTGCTTAG CAAGACTAAA CTGTGCGAGG CCTCGCGGCG GATCATGAGG 
CTCATGATCC GCCGCGGGCT AAGTAGGCGG CCCGAGCATT TCGCATGTTT GATGCTCTCC 
TACAGCCGCG CGGGAAAGCT CAGGACCGCG ATGAGGGTTT TGAATCTGAT GCAGAAAGAT 
GGCTGCGCTC CGGACTTGAC CGTTTGTAAT GCGGCGATTC AGGTTCTTGT GATGGCCGGC 
CGGTTGGCGA AGGCGGTTAA GTTCTCGGAT CGCATGGAAA GGGTCGGAAT CAAGCCTAAT 
ATTATTACTT ACAATTCGCT GATAAAGGGG CTTTGCGATG CGGGAAGATA CGAAAATGCC 
CTAGTAATGA TTCAACAGAT GCCTCTCAGA GGTTGCTCGC CCGACAAGAT CACTTACTAC 
ACAGTGATGA ACTTCTTCTG CAAAGAGAAG AGGATGGGAG AGGTGAGAGA GTTGCTGGAG 
AGGATGAGAA TGGAGGCGAA TTTGATTCCT GATCAGGTAA CTTATATTAT GATAATTCAC 
GCATTAGCAA AGCATGGGCA CGCGGATGAG GCGCTTGAGT TTATGCGCGA GTCGGAGGAG 
AAAGGGTTCA GGATAGATGA GGTTGGATAT AGCTCCGTCG TGCATTCATT TTGTCAGAGT 
GGGAGGATGG AGGAGGCGAA GAATATCGTC ACCGAGATGA TTTCAAAAGG TTGCCTTCCT 
GATGTGGTGA CATATAGCGC GGTCATTGAC GGATTTTGCC GAATAGGGAA AATTGATCAA 
GCAAGAAAGA TGCTGAAGTA TATGTATAAG AATAATTGTA AGCCGAACAC GGTCACATAC 
ACTGCATTGT TGAACGGGTT GTGCCGAATT GGGAAATCAT CAGAAGCGTG GGAAATGCTC 
AATCGGAGCG AGGAGGAATG GTGGACGCCG AATAATATTT CGTATAGCGT CGTCATGCAC 
GGTTTGAGAA GAGAAGGGAA GCTGAAAGAG GCTTGTAATT TGGTCACGCA GATGCTGCGA 
AATGGATTCT TCCCCACACC GGCCGAGGTT AATTTACTTC TCCATGCACT GTGTAAAGAG 
GGTGACGTGG GAGAGGCGAA GAAGTTCATG GAGGAGTGTC AAAGCAAGGG TTGTGCCATT 
AATGTGATAA ATTTCACCAC CGTAATCCAT GGATTTTGCC AGGAAAATGA CTTGGGTTCA 
GCGCTTTCGT TGCTGGACGA CATGTATTTG AGCAATAGGC ATCCCGACGT TTACACTTAC 
ACGGTTATGA TTGATGCTTT GGGAAAGAAT GATCGGTTCG AAGAAGCAAC AGAGCTTGCA 
AAGAAGATGC TCCATAGAGG ATTGGTTCCT ACGCCCGTTA TGTATAGGAC AGTGATACAT 
AGATACTGCG AGAAGGGTAA GGTTGAAGAG TTACTGAAGT TGCTCGAGAA AATGCTGCAG 
AGAAAGGAGC TAAGAAGTGC ATACAACCAA GTGATTGAGA AGCTTTGTGC CTTGGGCAAA 
CCTGAAGAGG CTTACAAGAT TTTAGGGAAG GTTTTGAGAA CAGCCTCGAA GATCGATGGA 
CAAACATGCC ACATTTTGAT GGTGAGTTCT CTCAGGAGTG GTCTTCCACT GCAGTCGTAT 
GAAGTGGCGT GCCGAATGTT CCAGAGGAAC TTAATTCCTG ATGTTAAAGT GTGTCAAAAA 
GTTAAGGATA GGCTAGTCTT GGAGGGACAT GCGAATCACG GAGAAAAGCT TATGACTAAA 
TTTGTTGAGA GAGGGCTCCT TTCACCTCAG AACCAGTAG