ORF » Species Summary » Oryza sativa Japonica Group » Reactome

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Oryza sativa Japonica Group (Japanese rice)

Browse by Letter Index, Genomic Locus


Telomere C-strand synthesis initiation Energy dependent regulation of mTOR by LKB1-AMPK
Signalling to p38 via RIT and RIN Signaling by VEGF
RAF-independent MAPK1/3 activation Signaling by Rho GTPases
Signaling by GPCR IGF1R signaling cascade
IRS-related events triggered by IGF1R Retinoid metabolism and transport
The canonical retinoid cycle in rods (twilight vision) Inactivation, recovery and regulation of the phototransduction cascade
RA biosynthesis pathway PTK6 Regulates Proteins Involved in RNA Processing
Lysosomal glycogen catabolism Galactose catabolism
Peroxisomal lipid metabolism Regulation of cholesterol biosynthesis by SREBP (SREBF)
Bile acid and bile salt metabolism Androgen biosynthesis
Synthesis of CL Synthesis of 12-eicosatetraenoic acid derivatives
Synthesis of Hepoxilins (HX) and Trioxilins (TrX) Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.
Respiratory electron transport Purine ribonucleoside monophosphate biosynthesis
Vitamins B6 activation to pyridoxal phosphate Metabolism of folate and pterines
Molybdenum cofactor biosynthesis Amino acid synthesis and interconversion (transamination)
Histidine catabolism Amine-derived hormones
Glyoxylate metabolism and glycine degradation Endogenous sterols
Formation of the active cofactor, UDP-glucuronate O2/CO2 exchange in erythrocytes
Erythrocytes take up carbon dioxide and release oxygen Abacavir metabolism
DNA Replication TP53 Regulates Metabolic Genes
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening RNA Polymerase II Promoter Escape
RNA Pol II CTD phosphorylation and interaction with CE Deadenylation-dependent mRNA decay
mRNA decay by 5' to 3' exoribonuclease Small interfering RNA (siRNA) biogenesis
Post-transcriptional silencing by small RNAs Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA
rRNA processing Adaptive Immune System
Antigen processing: Ubiquitination & Proteasome degradation MAP kinase activation in TLR cascade
activated TAK1 mediates p38 MAPK activation Toll Like Receptor 7/8 (TLR7/8) Cascade
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation MyD88:Mal cascade initiated on plasma membrane
Toll Like Receptor 2 (TLR2) Cascade Toll Like Receptor TLR1:TLR2 Cascade
Fc epsilon receptor (FCERI) signaling Cytokine Signaling in Immune system
Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell Post NMDA receptor activation events
Platelet activation, signaling and aggregation Cardiac conduction
NCAM signaling for neurite out-growth L1CAM interactions
Hexose transport Passive transport by Aquaporins
Programmed Cell Death Metabolism of proteins
Formation of a pool of free 40S subunits Eukaryotic Translation Elongation
Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding Synthesis of substrates in N-glycan biosythesis
Synthesis of Dolichyl-phosphate Synthesis of UDP-N-acetyl-glucosamine
COPII (Coat Protein 2) Mediated Vesicle Transport SUMOylation
Processing and activation of SUMO XBP1(S) activates chaperone genes
COPI-dependent Golgi-to-ER retrograde traffic Clathrin derived vesicle budding
Base Excision Repair Recognition of DNA damage by PCNA-containing replication complex
Termination of translesion DNA synthesis Sensing of DNA Double Strand Breaks
Homologous DNA Pairing and Strand Exchange Global Genome Nucleotide Excision Repair (GG-NER)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) UCH proteinases
Ub-specific processing proteases RSK activation
Nonhomologous End-Joining (NHEJ) Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
RAB geranylgeranylation PRC2 methylates histones and DNA
Senescence-Associated Secretory Phenotype (SASP) TBC/RABGAPs
Condensation of Prophase Chromosomes APC/C:Cdc20 mediated degradation of mitotic proteins
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