Gene Symbol | SPA4 |
Entrez Gene ID | 841743 |
Full Name | SPA1-related 4 |
Synonyms | F8L10.5,F8L10_5,SPA1-related 4 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » SPA4 cDNA ORF clone
Gene Symbol | SPA4 |
Entrez Gene ID | 841743 |
Full Name | SPA1-related 4 |
Synonyms | F8L10.5,F8L10_5,SPA1-related 4 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001333578.1 | NP_001321534.1 | SPA1-related 4 |
NM_001333577.1 | NP_001321532.1 | SPA1-related 4 |
NM_179471.2 | NP_849802.1 | SPA1-related 4 |
NM_104188.4 | NP_175717.1 | SPA1-related 4 |
NM_001333576.1 | NP_001321533.1 | SPA1-related 4 |
Arabidopsis thaliana (thale cress) | SPA3 | NP_683567.1 |
Arabidopsis thaliana (thale cress) | SPA4 | NP_175717.1 |
Oryza sativa (rice) | Os01g0725800 | NP_001044115.2 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
SPA proteins have a dual role: (1) they are required for light-responsiveness of COP1 subcellular localization, and (2) they promote COP1 activity in darkness in a fashion that is independent of the nuclear import/nuclear retention of COP1.
Title: SPA Proteins Affect the Subcellular Localization of COP1 in the COP1/SPA Ubiquitin Ligase Complex during Photomorphogenesis.
COP1/SPA activity, via LONG HYPOCOTYL IN FR LIGHT1, is required for shade-induced modulation of the auxin biosynthesis pathway and thereby enhances cell elongation in low red:far red.
Title: Arabidopsis COP1 and SPA genes are essential for plant elongation but not for acceleration of flowering time in response to a low red light to far-red light ratio.
SPA4 protein can self-associate or interact with each other, forming stable heterogeneous group of SPA-COP1 complexes regardless of light conditions but exhibit distinct expression profiles in different tissues and light conditions.
Title: Biochemical characterization of Arabidopsis complexes containing CONSTITUTIVELY PHOTOMORPHOGENIC1 and SUPPRESSOR OF PHYA proteins in light control of plant development.
The following SPA4 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SPA4 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb26252 | |
Clone ID Related Accession (Same CDS sequence) | NM_179471.2 , NM_104188.4 , NM_001333576.1 | |
Accession Version | NM_179471.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2385bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | SPA1-related 4 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_179471.1. |
1 | ATGAAGGGTT CTTCAGAATC TAGTTCCAGA GGATTAAACA ACACCTCTGG TGTTTCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_849802.1 |
CDS | 425..2809 |
Translation |
Target ORF information:
Target ORF information:
|
NM_179471.2 |
1 | ATGAAGGGTT CTTCAGAATC TAGTTCCAGA GGATTAAACA ACACCTCTGG TGTTTCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb26252 | |
Clone ID Related Accession (Same CDS sequence) | NM_179471.2 , NM_104188.4 , NM_001333576.1 | |
Accession Version | NM_104188.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2385bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | SPA1-related 4 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_104188.3. |
1 | ATGAAGGGTT CTTCAGAATC TAGTTCCAGA GGATTAAACA ACACCTCTGG TGTTTCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_175717.1 |
CDS | 451..2835 |
Translation |
Target ORF information:
Target ORF information:
|
NM_104188.4 |
1 | ATGAAGGGTT CTTCAGAATC TAGTTCCAGA GGATTAAACA ACACCTCTGG TGTTTCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb26252 | |
Clone ID Related Accession (Same CDS sequence) | NM_179471.2 , NM_104188.4 , NM_001333576.1 | |
Accession Version | NM_001333576.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2385bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | SPA1-related 4 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGAAGGGTT CTTCAGAATC TAGTTCCAGA GGATTAAACA ACACCTCTGG TGTTTCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001321533.1 |
CDS | 347..2731 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001333576.1 |
1 | ATGAAGGGTT CTTCAGAATC TAGTTCCAGA GGATTAAACA ACACCTCTGG TGTTTCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb34403 | |
Clone ID Related Accession (Same CDS sequence) | NM_001333577.1 | |
Accession Version | NM_001333577.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1722bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | SPA1-related 4 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGTCTAGTT TAAGACATCG TGTTCTTCCC CCTCAGATAT TACTCAATTG GCCTAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001321532.1 |
CDS | 854..2575 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001333577.1 |
1 | ATGTCTAGTT TAAGACATCG TGTTCTTCCC CCTCAGATAT TACTCAATTG GCCTAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb34404 | |
Clone ID Related Accession (Same CDS sequence) | NM_001333578.1 | |
Accession Version | NM_001333578.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1857bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | SPA1-related 4 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). COMPLETENESS: incomplete on the 3' end. |
1 | ATGAAGGGTT CTTCAGAATC TAGTTCCAGA GGATTAAACA ACACCTCTGG TGTTTCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001321534.1 |
CDS | 397..2253 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001333578.1 |
1 | ATGAAGGGTT CTTCAGAATC TAGTTCCAGA GGATTAAACA ACACCTCTGG TGTTTCAGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |