ORF » Species Summary » Arabidopsis thaliana » AT5G48560 cDNA ORF clone

AT5G48560 cDNA ORF clone, Arabidopsis thaliana(thale cress)

The following AT5G48560 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G48560 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OAb41715 NM_001344777.1
Latest version!		 Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G48560), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00
OAb20935 NM_124232.4
Latest version!		 Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G48560), mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $258.30
$369.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    AT5G48560 ( NM_001344777.1 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_001330141.1 Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G48560), mRNA.
    Price & Availability↑
    CloneID OAb41715
    Clone ID Related Accession (Same CDS sequence) NM_001344777.1
    Accession Version NM_001344777.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1404bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-02-13
    Organism Arabidopsis thaliana(thale cress)
    Product basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Comment Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGACAACG AGCTGTTTAT GAACACAGAG TTTCCACCAC CGCCGGAGAT GGCGACGCAT 
    TTCGAACACC AACAGTCTTC TTCATCGGCC ATGATGCTTA ATTGGGCTTT AATGGATCCA 
    AATCCGCATC AAGATTCTTC CTTTTTATGG GAAAAGTCAA CGGAACAACA ACAACAACAA 
    AGCATCTTTG ACTCTGCTTT AAGCTCATTA GTCTCATCAC CGACGCCGTC AAATTCCAAC 
    TTCTCCGGCG GTGGCGGTGA CGGTTTTCTC ATCAGAGAAC TCATCGGAAA GCTTGGAAAC 
    ATCGGTAATA ATAATAACAA CTCCGGTGAG ATCTACGGAA CTCCGATGTC TCGCTCCGCC 
    TCATGTTACG CAACTCCGAT GAGCTCTCCA CCGCCACCGA CGAATTCGAA TTCTCAGATG 
    ATGATGAACA GAACGACGCC GTTGACGGAA TTCTCAGCAG ATCCGGGTTT TGCGGAGAGA 
    GCAGCTAGAT TCTCTTGTTT TGGTAGTCGG AGCTTTAACG GAAGAACCAA TACAAATCTT 
    CCGATTAACA ACGGTAATAA CATGGTCAAC AACTCCGGGA AGCTGACACG TGTCTCCAGC 
    ACACCAGCTC TTAAGGCTCT TGTTTCACCG GAAGTCACAC CCGGCGGCGA ATTTTCCCGG 
    AAGAGAAAAT CTGTGCCTAA AGGAAAATCC AAAGAAAACC CCATTTCTAC AGCTTCTCCA 
    TCTCCTAGTT TCTCAAAGAC GGCGGAAAAG AATGGTGGAA AAGGAGGAAG TAAAAGTTCA 
    GAAGAAAAAG GAGGAAAAAG GAGAAGAGAA GAAGAAGATG ATGAAGAAGA AGAAGGAGAA 
    GGTGAAGGGA ACAAAAGCAA TAACACAAAA CCACCTGAGC CTCCTAAAGA TTACATTCAT 
    GTTCGAGCTC GACGAGGCCA AGCAACCGAT AGTCACAGCC TCGCCGAACG AGTTCGGAGG 
    GAGAAAATTG GTGAAAGGAT GAAGCTTCTT CAAGATCTTG TGCCTGGATG CAATAAGGTT 
    ACTGGAAAAG CACTGATGCT TGATGAAATT ATAAACTACG TACAATCATT GCAAAGACAA 
    GTTGAGTTCT TGTCAATGAA GTTATCATCA GTGAACGACA CCAGGCTGGA TTTTAACGTG 
    GACGCTCTTG TGTCAAAGGA TGTTATGATT CCATCAAGTA ACAACCGATT GCATGAAGAA 
    GGACTCCAAT CAAAGTCTTC AAGTCATCAT CATCAACAAC AACTTAATAT TTATAACAAT 
    AATTCACAAT TACTTCCCAA TATTTCTTCC AATAACATGA TGCTCCAGTC TCCTATGAAC 
    TCTTTGGAAA CCTCTACCTT AGCCAGAAGC TTCACTCACT TACCAACACT TACCCAATTT 
    ACTGACTCAA TTTCTCAGGT TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001330141.1
    CDS352..1755
    Translation

    Target ORF information:

    RefSeq Version NM_001344777.1
    Organism Arabidopsis thaliana(thale cress)
    Definition Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G48560), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001344777.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGACAACG AGCTGTTTAT GAACACAGAG TTTCCACCAC CGCCGGAGAT GGCGACGCAT 
    TTCGAACACC AACAGTCTTC TTCATCGGCC ATGATGCTTA ATTGGGCTTT AATGGATCCA 
    AATCCGCATC AAGATTCTTC CTTTTTATGG GAAAAGTCAA CGGAACAACA ACAACAACAA 
    AGCATCTTTG ACTCTGCTTT AAGCTCATTA GTCTCATCAC CGACGCCGTC AAATTCCAAC 
    TTCTCCGGCG GTGGCGGTGA CGGTTTTCTC ATCAGAGAAC TCATCGGAAA GCTTGGAAAC 
    ATCGGTAATA ATAATAACAA CTCCGGTGAG ATCTACGGAA CTCCGATGTC TCGCTCCGCC 
    TCATGTTACG CAACTCCGAT GAGCTCTCCA CCGCCACCGA CGAATTCGAA TTCTCAGATG 
    ATGATGAACA GAACGACGCC GTTGACGGAA TTCTCAGCAG ATCCGGGTTT TGCGGAGAGA 
    GCAGCTAGAT TCTCTTGTTT TGGTAGTCGG AGCTTTAACG GAAGAACCAA TACAAATCTT 
    CCGATTAACA ACGGTAATAA CATGGTCAAC AACTCCGGGA AGCTGACACG TGTCTCCAGC 
    ACACCAGCTC TTAAGGCTCT TGTTTCACCG GAAGTCACAC CCGGCGGCGA ATTTTCCCGG 
    AAGAGAAAAT CTGTGCCTAA AGGAAAATCC AAAGAAAACC CCATTTCTAC AGCTTCTCCA 
    TCTCCTAGTT TCTCAAAGAC GGCGGAAAAG AATGGTGGAA AAGGAGGAAG TAAAAGTTCA 
    GAAGAAAAAG GAGGAAAAAG GAGAAGAGAA GAAGAAGATG ATGAAGAAGA AGAAGGAGAA 
    GGTGAAGGGA ACAAAAGCAA TAACACAAAA CCACCTGAGC CTCCTAAAGA TTACATTCAT 
    GTTCGAGCTC GACGAGGCCA AGCAACCGAT AGTCACAGCC TCGCCGAACG AGTTCGGAGG 
    GAGAAAATTG GTGAAAGGAT GAAGCTTCTT CAAGATCTTG TGCCTGGATG CAATAAGGTT 
    ACTGGAAAAG CACTGATGCT TGATGAAATT ATAAACTACG TACAATCATT GCAAAGACAA 
    GTTGAGTTCT TGTCAATGAA GTTATCATCA GTGAACGACA CCAGGCTGGA TTTTAACGTG 
    GACGCTCTTG TGTCAAAGGA TGTTATGATT CCATCAAGTA ACAACCGATT GCATGAAGAA 
    GGACTCCAAT CAAAGTCTTC AAGTCATCAT CATCAACAAC AACTTAATAT TTATAACAAT 
    AATTCACAAT TACTTCCCAA TATTTCTTCC AATAACATGA TGCTCCAGTC TCCTATGAAC 
    TCTTTGGAAA CCTCTACCTT AGCCAGAAGC TTCACTCACT TACCAACACT TACCCAATTT 
    ACTGACTCAA TTTCTCAGGT TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    AT5G48560 ( NM_124232.4 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_199667.1 Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G48560), mRNA.
    Price & Availability↑
    CloneID OAb20935
    Clone ID Related Accession (Same CDS sequence) NM_124232.4
    Accession Version NM_124232.4 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1497bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-02-13
    Organism Arabidopsis thaliana(thale cress)
    Product basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Comment Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_124232.3. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGACAACG AGCTGTTTAT GAACACAGAG TTTCCACCAC CGCCGGAGAT GGCGACGCAT 
    TTCGAACACC AACAGTCTTC TTCATCGGCC ATGATGCTTA ATTGGGCTTT AATGGATCCA 
    AATCCGCATC AAGATTCTTC CTTTTTATGG GAAAAGTCAA CGGAACAACA ACAACAACAA 
    AGCATCTTTG ACTCTGCTTT AAGCTCATTA GTCTCATCAC CGACGCCGTC AAATTCCAAC 
    TTCTCCGGCG GTGGCGGTGA CGGTTTTCTC ATCAGAGAAC TCATCGGAAA GCTTGGAAAC 
    ATCGGTAATA ATAATAACAA CTCCGGTGAG ATCTACGGAA CTCCGATGTC TCGCTCCGCC 
    TCATGTTACG CAACTCCGAT GAGCTCTCCA CCGCCACCGA CGAATTCGAA TTCTCAGATG 
    ATGATGAACA GAACGACGCC GTTGACGGAA TTCTCAGCAG ATCCGGGTTT TGCGGAGAGA 
    GCAGCTAGAT TCTCTTGTTT TGGTAGTCGG AGCTTTAACG GAAGAACCAA TACAAATCTT 
    CCGATTAACA ACGGTAATAA CATGGTCAAC AACTCCGGGA AGCTGACACG TGTCTCCAGC 
    ACACCAGCTC TTAAGGCTCT TGTTTCACCG GAAGTCACAC CCGGCGGCGA ATTTTCCCGG 
    AAGAGAAAAT CTGTGCCTAA AGGAAAATCC AAAGAAAACC CCATTTCTAC AGCTTCTCCA 
    TCTCCTAGTT TCTCAAAGAC GGCGGAAAAG AATGGTGGAA AAGGAGGAAG TAAAAGTTCA 
    GAAGAAAAAG GAGGAAAAAG GAGAAGAGAA GAAGAAGATG ATGAAGAAGA AGAAGGAGAA 
    GGTGAAGGGA ACAAAAGCAA TAACACAAAA CCACCTGAGC CTCCTAAAGA TTACATTCAT 
    GTTCGAGCTC GACGAGGCCA AGCAACCGAT AGTCACAGCC TCGCCGAACG AGTTCGGAGG 
    GAGAAAATTG GTGAAAGGAT GAAGCTTCTT CAAGATCTTG TGCCTGGATG CAATAAGGTT 
    ACTGGAAAAG CACTGATGCT TGATGAAATT ATAAACTACG TACAATCATT GCAAAGACAA 
    GTTGAGTTCT TGTCAATGAA GTTATCATCA GTGAACGACA CCAGGCTGGA TTTTAACGTG 
    GACGCTCTTG TGTCAAAGGA TGTTATGATT CCATCAAGTA ACAACCGATT GCATGAAGAA 
    GGACTCCAAT CAAAGTCTTC AAGTCATCAT CATCAACAAC AACTTAATAT TTATAACAAT 
    AATTCACAAT TACTTCCCAA TATTTCTTCC AATAACATGA TGCTCCAGTC TCCTATGAAC 
    TCTTTGGAAA CCTCTACCTT AGCCAGAAGC TTCACTCACT TACCAACACT TACCCAATTT 
    ACTGACTCAA TTTCTCAGTA TCAAATGTTT AGCGAAGAAG ATTTACAAAG CATAGTAGGA 
    ATGGGAGTGG CAGAAAACCC CAACAATGAA TCTCAACACA TGAAAATTGA GCTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_199667.1
    CDS352..1848
    Translation

    Target ORF information:

    RefSeq Version NM_124232.4
    Organism Arabidopsis thaliana(thale cress)
    Definition Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AT5G48560), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_124232.4

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGACAACG AGCTGTTTAT GAACACAGAG TTTCCACCAC CGCCGGAGAT GGCGACGCAT 
    TTCGAACACC AACAGTCTTC TTCATCGGCC ATGATGCTTA ATTGGGCTTT AATGGATCCA 
    AATCCGCATC AAGATTCTTC CTTTTTATGG GAAAAGTCAA CGGAACAACA ACAACAACAA 
    AGCATCTTTG ACTCTGCTTT AAGCTCATTA GTCTCATCAC CGACGCCGTC AAATTCCAAC 
    TTCTCCGGCG GTGGCGGTGA CGGTTTTCTC ATCAGAGAAC TCATCGGAAA GCTTGGAAAC 
    ATCGGTAATA ATAATAACAA CTCCGGTGAG ATCTACGGAA CTCCGATGTC TCGCTCCGCC 
    TCATGTTACG CAACTCCGAT GAGCTCTCCA CCGCCACCGA CGAATTCGAA TTCTCAGATG 
    ATGATGAACA GAACGACGCC GTTGACGGAA TTCTCAGCAG ATCCGGGTTT TGCGGAGAGA 
    GCAGCTAGAT TCTCTTGTTT TGGTAGTCGG AGCTTTAACG GAAGAACCAA TACAAATCTT 
    CCGATTAACA ACGGTAATAA CATGGTCAAC AACTCCGGGA AGCTGACACG TGTCTCCAGC 
    ACACCAGCTC TTAAGGCTCT TGTTTCACCG GAAGTCACAC CCGGCGGCGA ATTTTCCCGG 
    AAGAGAAAAT CTGTGCCTAA AGGAAAATCC AAAGAAAACC CCATTTCTAC AGCTTCTCCA 
    TCTCCTAGTT TCTCAAAGAC GGCGGAAAAG AATGGTGGAA AAGGAGGAAG TAAAAGTTCA 
    GAAGAAAAAG GAGGAAAAAG GAGAAGAGAA GAAGAAGATG ATGAAGAAGA AGAAGGAGAA 
    GGTGAAGGGA ACAAAAGCAA TAACACAAAA CCACCTGAGC CTCCTAAAGA TTACATTCAT 
    GTTCGAGCTC GACGAGGCCA AGCAACCGAT AGTCACAGCC TCGCCGAACG AGTTCGGAGG 
    GAGAAAATTG GTGAAAGGAT GAAGCTTCTT CAAGATCTTG TGCCTGGATG CAATAAGGTT 
    ACTGGAAAAG CACTGATGCT TGATGAAATT ATAAACTACG TACAATCATT GCAAAGACAA 
    GTTGAGTTCT TGTCAATGAA GTTATCATCA GTGAACGACA CCAGGCTGGA TTTTAACGTG 
    GACGCTCTTG TGTCAAAGGA TGTTATGATT CCATCAAGTA ACAACCGATT GCATGAAGAA 
    GGACTCCAAT CAAAGTCTTC AAGTCATCAT CATCAACAAC AACTTAATAT TTATAACAAT 
    AATTCACAAT TACTTCCCAA TATTTCTTCC AATAACATGA TGCTCCAGTC TCCTATGAAC 
    TCTTTGGAAA CCTCTACCTT AGCCAGAAGC TTCACTCACT TACCAACACT TACCCAATTT 
    ACTGACTCAA TTTCTCAGTA TCAAATGTTT AGCGAAGAAG ATTTACAAAG CATAGTAGGA 
    ATGGGAGTGG CAGAAAACCC CAACAATGAA TCTCAACACA TGAAAATTGA GCTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
    Nature408(6814)823-6(2000 Dec)
    Tabata S,Kaneko T,Nakamura Y,Kotani H,Kato T,Asamizu E,Miyajima N,Sasamoto S,Kimura T,Hosouchi T,Kawashima K,Kohara M,Matsumoto M,Matsuno A,Muraki A,Nakayama S,Nakazaki N,Naruo K,Okumura S,Shinpo S,Takeuchi C,Wada T,Watanabe A,Yamada M,Yasuda M,Sato S,de la Bastide M,Huang E,Spiegel L,Gnoj L,O'Shaughnessy A,Preston R,Habermann K,Murray J,Johnson D,Rohlfing T,Nelson J,Stoneking T,Pepin K,Spieth J,Sekhon M,Armstrong J,Becker M,Belter E,Cordum H,Cordes M,Courtney L,Courtney W,Dante M,Du H,Edwards J,Fryman J,Haakensen B,Lamar E,Latreille P,Leonard S,Meyer R,Mulvaney E,Ozersky P,Riley A,Strowmatt C,Wagner-McPherson C,Wollam A,Yoakum M,Bell M,Dedhia N,Parnell L,Shah R,Rodriguez M,See LH,Vil D,Baker J,Kirchoff K,Toth K,King L,Bahret A,Miller B,Marra M,Martienssen R,McCombie WR,Wilson RK,Murphy G,Bancroft I,Volckaert G,Wambutt R,D?sterh?ft A,Stiekema W,Pohl T,Entian KD,Terryn N,Hartley N,Bent E,Johnson S,Langham SA,McCullagh B,Robben J,Grymonprez B,Zimmermann W,Ramsperger U,Wedler H,Balke K,Wedler E,Peters S,van Staveren M,Dirkse W,Mooijman P,Lankhorst RK,Weitzenegger T,Bothe G,Rose M,Hauf J,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Villarroel R,Gielen J,Ardiles W,Bents O,Lemcke K,Kolesov G,Mayer K,Rudd S,Schoof H,Schueller C,Zaccaria P,Mewes HW,Bevan M,Fransz P,,,


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