ORF » Species Summary » Arabidopsis thaliana » AT5G47400 cDNA ORF clone

AT5G47400 cDNA ORF clone, Arabidopsis thaliana(thale cress)

The following AT5G47400 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G47400 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OAb02868 NM_124111.3
Latest version!		 Arabidopsis thaliana sphingomyelin phosphodiesterase (AT5G47400), partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 12-14 $510.30
$729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    AT5G47400 ( NM_124111.3 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_199551.2 Arabidopsis thaliana sphingomyelin phosphodiesterase (AT5G47400), partial mRNA.
    Price & Availability↑
    CloneID OAb02868
    Clone ID Related Accession (Same CDS sequence) NM_124111.3
    Accession Version NM_124111.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2589bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-02-13
    Organism Arabidopsis thaliana(thale cress)
    Product sphingomyelin phosphodiesterase
    Comment Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_124111.2. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGCCACGTG GCACGTTCGC TTTCTTTTTC TTCCTCGTGT TGATTTTTTT TCTTCTCTTT 
    TGTCCCTCTT TGGTTTTTCT TTTCCCCTTC ACAAGGCGCG ATTTGAGTCG CCTCGCATTT 
    CAAACCCTTC TTCTCCGGCG TAAACCTTTG CTCTATCTCT CGATAAAAAC CCTTGTTTCG 
    TTTTCACCTT CGTATTTAGC GATGCTTCCA CACTCCTACA CCGTCGATTC GCTTTCGCAA 
    TCACAAGACC TAGCTTCAGC TATACTCTCA GCTTCCACGC CGTCGAGTAT CTCCGCTGCT 
    TGCTCTTCCG TCGAATCGTT TCTTCAGTCG CATACGCCTG ATCAGTGTCG CCATTTCTTC 
    TCTGTTACTT TTCCGAGTTT AATCTGTAAG ATCTTCGGTT TCGGCGACAC GACCGCGGCA 
    TCTCCGGCAC AGTCTTCTTC GCTGCGACCG AACGGTTGGA TCGATGTAAT CTCGGCGGCC 
    AACGATTTGG ATTTAGCGGA GAGAGTATAC AATCTCTTAT CCCCTAGTGG AATACTCATG 
    AGCTCAATCT TCGCTGTTGA TAAATTAGCT CTTGTTAAGT ATGTTTTCCC GACGGAACGT 
    TTACCGGAGT ATGCTAGATT CATGCTCTCC AGCGAGAAGG ATCGAATTGC GTTATCGAAT 
    CTGTGCCCCT TTTTGAAAGG TAAAATTGAG GAGGATTCAG TTCGTGGTTC ATTGTGTGAA 
    GTTAGGCTAA ATGTTTTTGA GTATTACATG TTTTGGCTCT CTTATTATCC AGTTTGTAGA 
    GGAAACAATG AGATTTCAGC TGTGAATCTG AATCCTATCC AAAAGAGAAA CAAGTTTAGG 
    CTAGAGAATT GGACACTTAT CAAAGGTTTT CCAGGGAGTA ACAAGCGTGA TTCTGATCAG 
    AAATTGGAGT GTAATCTCTA CATAAGGCTT CTTTACTCTT ATTTGAAAGC ATTTGTTCCT 
    GTTTTCGACT TAAACGCTCA CCAGCCTTAT CGTAGTTCTC TTTTGCATTA CGGAAATGGG 
    TATGATGGGT CAGTGATGAC AAGAGCTGAG TTCTTGGTGA ATGTTTTCGT GCATTATTGG 
    CTTGTTGAGA ATGACTTCTC ACCATTTCCT GTTGTTACGG CTAAATCTTT TGGTGTGGCT 
    CCTCCTTTCC GTTCTGCTGT GGAGGAGATT CCACCTACTT GTGGGTTGGA AGAAGTAGTG 
    AAGTTGCTTG TCAAGTATCT GAATTTGAGT TGGGTTACAA GTGGTGTTGG GAGTGAAAAC 
    TACATTGAGT ATGGCGAGAG TCCACGGTGG AAGACACCGA CTTCAGGATC GTCATCCCAT 
    GTCGCGAATT TGAGCCTCAG GCCGCTCACT TCCTGGAACA CCCATTTACA GAGGCCGCTT 
    TATCGTTATA TATTGAGGAG TTTCTTGTTC TGTCCCATAG GAAGCTCAAT TAAGAATGCA 
    TCTCAGGTGT TCTCCATCTG GGTTACGTAC CTGGAACCAT GGATGATCAG TTTGGATGAT 
    TTCTCAGTTT TTGAACCTGC TTTAAGTGGA TCTGTAAAAG ATATGAAAAA GGAAGATTCT 
    TATGAATCAC GCGTTTGTGG ATACACGCCT TTGTGGCAGA GCTATGTGAT ATCCAATTAT 
    CTCTACTATA GTTCTCTGGT CATGCATTTT ATTGGCTTTG CACACAAGTT CCTTCACACA 
    GATCCAGAAA TAATAACTCA GATGGCTCTT AAGGTGATGA GTACGTTGAC ATCGTCAAAA 
    GAGCTTTTGG TTCTGATGAA GAATATTGAT AAAGCCTTTC ACTCTAAACA AACTGGACCA 
    GGAAACTCAA AAGTGAACGA ATTGTCTAGA TTTTCTCCAT CTATCCGTGA GCAGTTGAAG 
    GATTGGGAAG ATGGGTTGTG TGAGAGCAAC GCTGATGGCT CATACTTGCA TGAAAACTGG 
    AACAAAGACT TGAAACTCTT TAGTGATGGT GAAGATGGCG GACAACAACT GCTTCAGCTA 
    TTCATACTGC GGGCAGAAGC CGAACTGCAA ACTGTATCCG ATAAAAACCT CACAGAGGCC 
    CTTAAGTGTG TAGATTCACT AAAATCAGCG GTTTCCAACT TCTTTGGCGG GCATGTCGTA 
    AAACCAATCG CTTTTTTCCT AGAGCCGGAC CATCCTCAGA AAAACCGTGA CGAGCTCTTC 
    AAGCCACGTG GTGCTGGTAA CCAAACAGCA GGCGGTGTGA AGTACAAAGG GGACTGGATG 
    ACCCGTCCGG TGTCAGAAGA CGAGGTTGCA TTGATGGCTA AACTGCTAAT CAACATGTCT 
    ATTTGGCTCA ATGAACGCCT CGGGCTGAAC AAATCTGAGA CGAGCAACGA CAAGAAAGAG 
    AATTCAGAGT CAGTATCATA TGTAGATGTA TCAGGGGAAG ATGTGGGAAA CGTTGCAGGA 
    CCTGGAGATG CTGCGAAGAT GCTGTTGCGA GGGATGGTGA TGGTATGTGG CACAGTGTTG 
    CAGCTGATGA GAAGATTCGG GATTCGAGTC AATCTTCGGG TTATGGCTTC AAAAAAGTTT 
    CTGATGCTTT TATTTCTCTA TGTCCTGTTT CTTGTAGTCA AAAGGGTAGT CACAAGGATG 
    ATTTGGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_199551.2
    CDS1..2589
    Translation

    Target ORF information:

    RefSeq Version NM_124111.3
    Organism Arabidopsis thaliana(thale cress)
    Definition Arabidopsis thaliana sphingomyelin phosphodiesterase (AT5G47400), partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_124111.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGCCACGTG GCACGTTCGC TTTCTTTTTC TTCCTCGTGT TGATTTTTTT TCTTCTCTTT 
    TGTCCCTCTT TGGTTTTTCT TTTCCCCTTC ACAAGGCGCG ATTTGAGTCG CCTCGCATTT 
    CAAACCCTTC TTCTCCGGCG TAAACCTTTG CTCTATCTCT CGATAAAAAC CCTTGTTTCG 
    TTTTCACCTT CGTATTTAGC GATGCTTCCA CACTCCTACA CCGTCGATTC GCTTTCGCAA 
    TCACAAGACC TAGCTTCAGC TATACTCTCA GCTTCCACGC CGTCGAGTAT CTCCGCTGCT 
    TGCTCTTCCG TCGAATCGTT TCTTCAGTCG CATACGCCTG ATCAGTGTCG CCATTTCTTC 
    TCTGTTACTT TTCCGAGTTT AATCTGTAAG ATCTTCGGTT TCGGCGACAC GACCGCGGCA 
    TCTCCGGCAC AGTCTTCTTC GCTGCGACCG AACGGTTGGA TCGATGTAAT CTCGGCGGCC 
    AACGATTTGG ATTTAGCGGA GAGAGTATAC AATCTCTTAT CCCCTAGTGG AATACTCATG 
    AGCTCAATCT TCGCTGTTGA TAAATTAGCT CTTGTTAAGT ATGTTTTCCC GACGGAACGT 
    TTACCGGAGT ATGCTAGATT CATGCTCTCC AGCGAGAAGG ATCGAATTGC GTTATCGAAT 
    CTGTGCCCCT TTTTGAAAGG TAAAATTGAG GAGGATTCAG TTCGTGGTTC ATTGTGTGAA 
    GTTAGGCTAA ATGTTTTTGA GTATTACATG TTTTGGCTCT CTTATTATCC AGTTTGTAGA 
    GGAAACAATG AGATTTCAGC TGTGAATCTG AATCCTATCC AAAAGAGAAA CAAGTTTAGG 
    CTAGAGAATT GGACACTTAT CAAAGGTTTT CCAGGGAGTA ACAAGCGTGA TTCTGATCAG 
    AAATTGGAGT GTAATCTCTA CATAAGGCTT CTTTACTCTT ATTTGAAAGC ATTTGTTCCT 
    GTTTTCGACT TAAACGCTCA CCAGCCTTAT CGTAGTTCTC TTTTGCATTA CGGAAATGGG 
    TATGATGGGT CAGTGATGAC AAGAGCTGAG TTCTTGGTGA ATGTTTTCGT GCATTATTGG 
    CTTGTTGAGA ATGACTTCTC ACCATTTCCT GTTGTTACGG CTAAATCTTT TGGTGTGGCT 
    CCTCCTTTCC GTTCTGCTGT GGAGGAGATT CCACCTACTT GTGGGTTGGA AGAAGTAGTG 
    AAGTTGCTTG TCAAGTATCT GAATTTGAGT TGGGTTACAA GTGGTGTTGG GAGTGAAAAC 
    TACATTGAGT ATGGCGAGAG TCCACGGTGG AAGACACCGA CTTCAGGATC GTCATCCCAT 
    GTCGCGAATT TGAGCCTCAG GCCGCTCACT TCCTGGAACA CCCATTTACA GAGGCCGCTT 
    TATCGTTATA TATTGAGGAG TTTCTTGTTC TGTCCCATAG GAAGCTCAAT TAAGAATGCA 
    TCTCAGGTGT TCTCCATCTG GGTTACGTAC CTGGAACCAT GGATGATCAG TTTGGATGAT 
    TTCTCAGTTT TTGAACCTGC TTTAAGTGGA TCTGTAAAAG ATATGAAAAA GGAAGATTCT 
    TATGAATCAC GCGTTTGTGG ATACACGCCT TTGTGGCAGA GCTATGTGAT ATCCAATTAT 
    CTCTACTATA GTTCTCTGGT CATGCATTTT ATTGGCTTTG CACACAAGTT CCTTCACACA 
    GATCCAGAAA TAATAACTCA GATGGCTCTT AAGGTGATGA GTACGTTGAC ATCGTCAAAA 
    GAGCTTTTGG TTCTGATGAA GAATATTGAT AAAGCCTTTC ACTCTAAACA AACTGGACCA 
    GGAAACTCAA AAGTGAACGA ATTGTCTAGA TTTTCTCCAT CTATCCGTGA GCAGTTGAAG 
    GATTGGGAAG ATGGGTTGTG TGAGAGCAAC GCTGATGGCT CATACTTGCA TGAAAACTGG 
    AACAAAGACT TGAAACTCTT TAGTGATGGT GAAGATGGCG GACAACAACT GCTTCAGCTA 
    TTCATACTGC GGGCAGAAGC CGAACTGCAA ACTGTATCCG ATAAAAACCT CACAGAGGCC 
    CTTAAGTGTG TAGATTCACT AAAATCAGCG GTTTCCAACT TCTTTGGCGG GCATGTCGTA 
    AAACCAATCG CTTTTTTCCT AGAGCCGGAC CATCCTCAGA AAAACCGTGA CGAGCTCTTC 
    AAGCCACGTG GTGCTGGTAA CCAAACAGCA GGCGGTGTGA AGTACAAAGG GGACTGGATG 
    ACCCGTCCGG TGTCAGAAGA CGAGGTTGCA TTGATGGCTA AACTGCTAAT CAACATGTCT 
    ATTTGGCTCA ATGAACGCCT CGGGCTGAAC AAATCTGAGA CGAGCAACGA CAAGAAAGAG 
    AATTCAGAGT CAGTATCATA TGTAGATGTA TCAGGGGAAG ATGTGGGAAA CGTTGCAGGA 
    CCTGGAGATG CTGCGAAGAT GCTGTTGCGA GGGATGGTGA TGGTATGTGG CACAGTGTTG 
    CAGCTGATGA GAAGATTCGG GATTCGAGTC AATCTTCGGG TTATGGCTTC AAAAAAGTTT 
    CTGATGCTTT TATTTCTCTA TGTCCTGTTT CTTGTAGTCA AAAGGGTAGT CACAAGGATG 
    ATTTGGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
    Nature408(6814)823-6(2000 Dec)
    Tabata S,Kaneko T,Nakamura Y,Kotani H,Kato T,Asamizu E,Miyajima N,Sasamoto S,Kimura T,Hosouchi T,Kawashima K,Kohara M,Matsumoto M,Matsuno A,Muraki A,Nakayama S,Nakazaki N,Naruo K,Okumura S,Shinpo S,Takeuchi C,Wada T,Watanabe A,Yamada M,Yasuda M,Sato S,de la Bastide M,Huang E,Spiegel L,Gnoj L,O'Shaughnessy A,Preston R,Habermann K,Murray J,Johnson D,Rohlfing T,Nelson J,Stoneking T,Pepin K,Spieth J,Sekhon M,Armstrong J,Becker M,Belter E,Cordum H,Cordes M,Courtney L,Courtney W,Dante M,Du H,Edwards J,Fryman J,Haakensen B,Lamar E,Latreille P,Leonard S,Meyer R,Mulvaney E,Ozersky P,Riley A,Strowmatt C,Wagner-McPherson C,Wollam A,Yoakum M,Bell M,Dedhia N,Parnell L,Shah R,Rodriguez M,See LH,Vil D,Baker J,Kirchoff K,Toth K,King L,Bahret A,Miller B,Marra M,Martienssen R,McCombie WR,Wilson RK,Murphy G,Bancroft I,Volckaert G,Wambutt R,D?sterh?ft A,Stiekema W,Pohl T,Entian KD,Terryn N,Hartley N,Bent E,Johnson S,Langham SA,McCullagh B,Robben J,Grymonprez B,Zimmermann W,Ramsperger U,Wedler H,Balke K,Wedler E,Peters S,van Staveren M,Dirkse W,Mooijman P,Lankhorst RK,Weitzenegger T,Bothe G,Rose M,Hauf J,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Villarroel R,Gielen J,Ardiles W,Bents O,Lemcke K,Kolesov G,Mayer K,Rudd S,Schoof H,Schueller C,Zaccaria P,Mewes HW,Bevan M,Fransz P,,,


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