Gene Symbol | AT5G26680 |
Entrez Gene ID | 832721 |
Full Name | 5'-3' exonuclease family protein |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT5G26680 cDNA ORF clone
Gene Symbol | AT5G26680 |
Entrez Gene ID | 832721 |
Full Name | 5'-3' exonuclease family protein |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001343977.1 | NP_001332057.1 | 5'-3' exonuclease family protein |
NM_001343976.1 | NP_001332056.1 | 5'-3' exonuclease family protein |
NM_001343978.1 | NP_001332058.1 | 5'-3' exonuclease family protein |
NM_001161268.2 | NP_001154740.1 | 5'-3' exonuclease family protein |
NM_180546.3 | NP_850877.2 | 5'-3' exonuclease family protein |
Homo sapiens (human) | FEN1 | NP_004102.1 |
Canis lupus familiaris (dog) | FEN1 | XP_005631709.1 |
Gallus gallus (chicken) | FEN1 | NP_001072959.1 |
Drosophila melanogaster (fruit fly) | Fen1 | NP_523765.1 |
Xenopus tropicalis (tropical clawed frog) | fen1 | NP_001017005.1 |
FEN1 | XP_002799575.1 | |
Bos taurus (cattle) | FEN1 | NP_001030285.1 |
Rattus norvegicus (Norway rat) | Fen1 | NP_445882.1 |
Danio rerio (zebrafish) | fen1 | NP_942115.1 |
Caenorhabditis elegans (roundworm) | crn-1 | NP_491168.1 |
Kluyveromyces lactis | KLLA0F02992g | XP_455215.1 |
Neurospora crassa | NCU10776 | XP_001728355.1 |
Arabidopsis thaliana (thale cress) | AT5G26680 | NP_001154740.1 |
Mus musculus (house mouse) | Fen1 | NP_032025.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP011448 | XP_317855.2 |
Saccharomyces cerevisiae (baker's yeast) | RAD27 | NP_012809.1 |
Oryza sativa (rice) | Os05g0540100 | NP_001056179.1 |
Pan troglodytes (chimpanzee) | FEN1 | XP_003951955.1 |
Eremothecium gossypii | AGOS_ABL052C | NP_982895.2 |
Schizosaccharomyces pombe (fission yeast) | rad2 | NP_594972.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_03419 | XP_003716519.1 |
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
Tabata S, Kaneko T, Nakamura Y, Kotani H, Kato T, Asamizu E, Miyajima N, Sasamoto S, Kimura T, Hosouchi T, Kawashima K, Kohara M, Matsumoto M, Matsuno A, Muraki A, Nakayama S, Nakazaki N, Naruo K, Okumura S, Shinpo S, Takeuchi C, Wada T, Watanabe A, Yamada M, Yasuda M, Sato S, de la Bastide M, Huang E, Spiegel L, Gnoj L, O'Shaughnessy A, Preston R, Habermann K, Murray J, Johnson D, Rohlfing T, Nelson J, Stoneking T, Pepin K, Spieth J, Sekhon M, Armstrong J, Becker M, Belter E, Cordum H, Cordes M, Courtney L, Courtney W, Dante M, Du H, Edwards J, Fryman J, Haakensen B, Lamar E, Latreille P, Leonard S, Meyer R, Mulvaney E, Ozersky P, Riley A, Strowmatt C, Wagner-McPherson C, Wollam A, Yoakum M, Bell M, Dedhia N, Parnell L, Shah R, Rodriguez M, See LH, Vil D, Baker J, Kirchoff K, Toth K, King L, Bahret A, Miller B, Marra M, Martienssen R, McCombie WR, Wilson RK, Murphy G, Bancroft I, Volckaert G, Wambutt R, D?sterh?ft A, Stiekema W, Pohl T, Entian KD, Terryn N, Hartley N, Bent E, Johnson S, Langham SA, McCullagh B, Robben J, Grymonprez B, Zimmermann W, Ramsperger U, Wedler H, Balke K, Wedler E, Peters S, van Staveren M, Dirkse W, Mooijman P, Lankhorst RK, Weitzenegger T, Bothe G, Rose M, Hauf J, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Villarroel R, Gielen J, Ardiles W, Bents O, Lemcke K, Kolesov G, Mayer K, Rudd S, Schoof H, Schueller C, Zaccaria P, Mewes HW, Bevan M, Fransz P, , ,
Nature408(6814)823-6(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
At5g26680 role in mediating transcriptional gene silencing as well as maintaining genome stability
Title: Requirement for flap endonuclease 1 (FEN1) to maintain genomic stability and transcriptional gene silencing in Arabidopsis.
Data show that shade avoidance 6 (SAV6; At5g26680), encodes flap endonuclease-1 (FEN1), assures proper root development through maintenance of genome integrity.
Title: Shade avoidance 6 encodes an Arabidopsis flap endonuclease required for maintenance of genome integrity and development.
The following AT5G26680 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G26680 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb19606 | |
Clone ID Related Accession (Same CDS sequence) | NM_180546.3 | |
Accession Version | NM_180546.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1362bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | 5'-3' exonuclease family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_180546.2. COMPLETENESS: incomplete on the 3' end. |
1 | ATGGGTATTA AGGGTTTAAC GAAGCTTTTA GCCGACAATG CGCCTAGTTG TATGAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_850877.2 |
CDS | 82..1443 |
Translation |
Target ORF information:
Target ORF information:
|
NM_180546.3 |
1 | ATGGGTATTA AGGGTTTAAC GAAGCTTTTA GCCGACAATG CGCCTAGTTG TATGAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb29992 | |
Clone ID Related Accession (Same CDS sequence) | NM_001161268.2 | |
Accession Version | NM_001161268.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1152bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | 5'-3' exonuclease family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_001161268.1. |
1 | ATGGGTATTA AGGGTTTAAC GAAGCTTTTA GCCGACAATG CGCCTAGTTG TATGAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001154740.1 |
CDS | 93..1244 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001161268.2 |
1 | ATGGGTATTA AGGGTTTAAC GAAGCTTTTA GCCGACAATG CGCCTAGTTG TATGAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb41239 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343977.1 , NM_001343976.1 , NM_001343978.1 | |
Accession Version | NM_001343977.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1254bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | 5'-3' exonuclease family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGGGTATTA AGGGTTTAAC GAAGCTTTTA GCCGACAATG CGCCTAGTTG TATGAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001332057.1 |
CDS | 93..1346 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343977.1 |
1 | ATGGGTATTA AGGGTTTAAC GAAGCTTTTA GCCGACAATG CGCCTAGTTG TATGAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb41239 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343977.1 , NM_001343976.1 , NM_001343978.1 | |
Accession Version | NM_001343976.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1254bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | 5'-3' exonuclease family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGGGTATTA AGGGTTTAAC GAAGCTTTTA GCCGACAATG CGCCTAGTTG TATGAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001332056.1 |
CDS | 93..1346 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343976.1 |
1 | ATGGGTATTA AGGGTTTAAC GAAGCTTTTA GCCGACAATG CGCCTAGTTG TATGAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb41239 | |
Clone ID Related Accession (Same CDS sequence) | NM_001343977.1 , NM_001343976.1 , NM_001343978.1 | |
Accession Version | NM_001343978.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1254bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | 5'-3' exonuclease family protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). |
1 | ATGGGTATTA AGGGTTTAAC GAAGCTTTTA GCCGACAATG CGCCTAGTTG TATGAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001332058.1 |
CDS | 93..1346 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001343978.1 |
1 | ATGGGTATTA AGGGTTTAAC GAAGCTTTTA GCCGACAATG CGCCTAGTTG TATGAAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. |