Gene Symbol | AT4G32460 |
Entrez Gene ID | 829381 |
Full Name | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) |
Synonyms | F8B4.160,F8B4_160 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » AT4G32460 cDNA ORF clone
Gene Symbol | AT4G32460 |
Entrez Gene ID | 829381 |
Full Name | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) |
Synonyms | F8B4.160,F8B4_160 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_119398.4 | NP_567894.1 | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) |
NM_001342153.1 | NP_001329631.1 | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) |
NM_001342152.1 | NP_001329630.1 | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) |
NM_202932.1 | NP_974661.1 | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) |
Arabidopsis thaliana (thale cress) | AT4G32460 | NP_567894.1 |
Arabidopsis thaliana (thale cress) | AT5G25460 | NP_197928.1 |
Arabidopsis thaliana (thale cress) | AT5G11420 | NP_196703.1 |
Arabidopsis thaliana (thale cress) | AT1G80240 | NP_178141.1 |
Oryza sativa (rice) | Os02g0205200 | NP_001046247.2 |
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Transgenic lines overexpressing the DUF642 proteins encoded by At4g32460 and At5g11420 showed increased pectin methyl esterase 3 activity during seed germination, and improved seed germination performance.
Title: BIIDXI, the At4g32460 DUF642 gene, is involved in pectin methyl esterase regulation during Arabidopsis thaliana seed germination and plant development.
The following AT4G32460 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT4G32460 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb02053 | |
Clone ID Related Accession (Same CDS sequence) | NM_119398.4 , NM_202932.1 | |
Accession Version | NM_119398.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_119398.3. |
1 | ATGAAAGAGA TGGGAGTGAT AGTGCTTCTT CTCCTTCACT CGTTCTTCTA CGTTGCCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_567894.1 |
CDS | 174..1271 |
Translation |
Target ORF information:
Target ORF information:
|
NM_119398.4 |
1 | ATGAAAGAGA TGGGAGTGAT AGTGCTTCTT CTCCTTCACT CGTTCTTCTA CGTTGCCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb02053 | |
Clone ID Related Accession (Same CDS sequence) | NM_119398.4 , NM_202932.1 | |
Accession Version | NM_202932.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1098bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). |
1 | ATGAAAGAGA TGGGAGTGAT AGTGCTTCTT CTCCTTCACT CGTTCTTCTA CGTTGCCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_974661.1 |
CDS | 90..1187 |
Translation |
Target ORF information:
Target ORF information:
|
NM_202932.1 |
1 | ATGAAAGAGA TGGGAGTGAT AGTGCTTCTT CTCCTTCACT CGTTCTTCTA CGTTGCCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb39946 | |
Clone ID Related Accession (Same CDS sequence) | NM_001342153.1 , NM_001342152.1 | |
Accession Version | NM_001342153.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 978bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). COMPLETENESS: incomplete on the 3' end. |
1 | ATGAAAGGAA CACAAGTTAT CAACATAACA GCAATCCCAA ACTGGGAACT CTCAGGCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001329631.1 |
CDS | 531..1508 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001342153.1 |
1 | ATGAAAGGAA CACAAGTTAT CAACATAACA GCAATCCCAA ACTGGGAACT CTCAGGCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb39946 | |
Clone ID Related Accession (Same CDS sequence) | NM_001342153.1 , NM_001342152.1 | |
Accession Version | NM_001342152.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 978bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642) | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). COMPLETENESS: incomplete on the 3' end. |
1 | ATGAAAGGAA CACAAGTTAT CAACATAACA GCAATCCCAA ACTGGGAACT CTCAGGCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001329630.1 |
CDS | 909..1886 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001342152.1 |
1 | ATGAAAGGAA CACAAGTTAT CAACATAACA GCAATCCCAA ACTGGGAACT CTCAGGCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. |