Gene Symbol | CCA1 |
Entrez Gene ID | 819296 |
Full Name | circadian clock associated 1 |
Synonyms | AtCCA1,F19D11.11,MYB-RELATED DNA BINDING PROTEIN,circadian clock associated 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » CCA1 cDNA ORF clone
Gene Symbol | CCA1 |
Entrez Gene ID | 819296 |
Full Name | circadian clock associated 1 |
Synonyms | AtCCA1,F19D11.11,MYB-RELATED DNA BINDING PROTEIN,circadian clock associated 1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_180130.2 | NP_850461.1 | circadian clock associated 1 |
NM_001337221.1 | NP_001318437.1 | circadian clock associated 1 |
NM_180129.4 | NP_850460.1 | circadian clock associated 1 |
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M, Feldblyum TV, Buell CR, Ketchum KA, Lee J, Ronning CM, Koo HL, Moffat KS, Cronin LA, Shen M, Pai G, Van Aken S, Umayam L, Tallon LJ, Gill JE, Adams MD, Carrera AJ, Creasy TH, Goodman HM, Somerville CR, Copenhaver GP, Preuss D, Nierman WC, White O, Eisen JA, Salzberg SL, Fraser CM, Venter JC
Nature402(6763)761-8(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
the diurnal changes of endogenous melatonin may regulate corresponding changes of AtCBF/DREB1s expression and their underlying diurnal cycle of plant immunity and AtCCA1.
Title: Melatonin-induced CBF/DREB1s are essential for diurnal change of disease resistance and CCA1 expression in Arabidopsis.
Direct binding by CCA1 in the morning provides strong repression of PRR5, and repression by CCA1 also temporally regulates an evening-expressed gene set that includes PRR5.
Title: Direct Repression of Evening Genes by CIRCADIAN CLOCK-ASSOCIATED1 in the Arabidopsis Circadian Clock.
Results show that TOC1 and CCA1 mRNA transcription levels are regulated by the newly identified Hesp gene and suggest a deadenylation as a mechanism involved in the regulation of the circadian clock. [hesp]
Title: AtHESPERIN: a novel regulator of circadian rhythms with poly(A)-degrading activity in plants.
work revealed several CCA1 targets that do not cycle in either LL or LD conditions. Together, our results emphasize an expanded role for the clock in regulating a diverse category of genes and key pathways in Arabidopsis
Title: Genome-wide identification of CCA1 targets uncovers an expanded clock network in Arabidopsis.
Transcriptional co-regulators PRR9, PRR7 and PRR5 inhibit circadian clock morning loop CCA1 expression by binding to its promoter.
Title: A Bayesian approach for parameter estimation in the extended clock gene circuit of Arabidopsis thaliana.
The following CCA1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CCA1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb09987 | |
Clone ID Related Accession (Same CDS sequence) | NM_180129.4 | |
Accession Version | NM_180129.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1827bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | circadian clock associated 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_180129.3. |
1 | ATGGAGACAA ATTCGTCTGG AGAAGATCTG GTTATTAAGA CTCGGAAGCC ATATACGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_850460.1 |
CDS | 331..2157 |
Translation |
Target ORF information:
Target ORF information:
|
NM_180129.4 |
1 | ATGGAGACAA ATTCGTCTGG AGAAGATCTG GTTATTAAGA CTCGGAAGCC ATATACGATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb09988 | |
Clone ID Related Accession (Same CDS sequence) | NM_180130.2 , NM_001337221.1 | |
Accession Version | NM_180130.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1581bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | circadian clock associated 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Nov 3, 2005 this sequence version replaced NM_180130.1. |
1 | ATGGGTCAAG CGCTAGACAT AGCTATTCCT CCTCCACGGC CTAAGCGTAA ACCAAACAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_850461.1 |
CDS | 105..1685 |
Translation |
Target ORF information:
Target ORF information:
|
NM_180130.2 |
1 | ATGGGTCAAG CGCTAGACAT AGCTATTCCT CCTCCACGGC CTAAGCGTAA ACCAAACAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb09988 | |
Clone ID Related Accession (Same CDS sequence) | NM_180130.2 , NM_001337221.1 | |
Accession Version | NM_001337221.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1581bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | circadian clock associated 1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). |
1 | ATGGGTCAAG CGCTAGACAT AGCTATTCCT CCTCCACGGC CTAAGCGTAA ACCAAACAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001318437.1 |
CDS | 851..2431 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001337221.1 |
1 | ATGGGTCAAG CGCTAGACAT AGCTATTCCT CCTCCACGGC CTAAGCGTAA ACCAAACAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. |