ORF » Species Summary » Populus trichocarpa » POPTR_0002s03000g cDNA ORF clone

POPTR_0002s03000g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0002s03000g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0002s03000g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa06504 XM_002300696.1
Latest version!		 Populus trichocarpa lateral root primordium family protein (POPTR_0002s03000g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $174.30
$249.00
OPa424277 XM_024594914.1
Latest version!		 Populus trichocarpa protein SHI RELATED SEQUENCE 5 (LOC7490677), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0002s03000g ( XM_002300696.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002300732.1 Populus trichocarpa lateral root primordium family protein (POPTR_0002s03000g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa06504
    Clone ID Related Accession (Same CDS sequence) XM_002300696.1
    Accession Version XM_002300696.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 966bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product lateral root primordium family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGCAGGGT GGTTCTATCT AGGTGAGAGA GAAGGGCCAT CAAGCAAACA AGATCAAGAG 
    AAAGAAGTCA ATAATAGTAG TTTGTTTTTG TACAGATCAT CAAACGAGGA GATCTACAAC 
    AACAACAAGG GGTTTGAGTT ATGGCCGCAG TATTATCCCC AGCAGCAAAA CATGAACAGC 
    TTCTCGTTTG GAGTGGGTCC TAGTCGAAGA AATTTCTCTG ATGATCACTC TCCAAGATCA 
    GGTTTTACAG TGATGAGACA AGGAGGAGGC TTAGGGGGAG GAATGAACTG TCAAGACTGC 
    GGGAACCAAG CTAAAAAAGA CTGTCCCCAT TCGAGATGTA GAACTTGTTG TAAGAGTCGA 
    GGGTTTCAGT GCCAAACACA CGTTAAGAGC ACTTGGGTCC CTGCTGCTAA AAGGAGAGAA 
    AGGCAGCAAC AACTAGCTGC TTTGCAACAA CAAAATCAAG AACAGCAACA GCAACAGCAA 
    CAGCAACAAC AGTTTCGAGG AGAGAATCCA AAAAGGCAGA GAGAGAATCA AGGTGGTGCT 
    TCCTCTCTTG CTTGCACTCG TTTAGCCACT ACCACGTCAG ATCAATTAGG GCTTGAAATG 
    ACAGCATTTC CACCAGAAGT GAATTCACAA GCCGTATTTC GTTGCGTTAA AGTAAGCGCC 
    CTGGACGATG CAGAAGATCA GTTAGCATAT CAAACGGCAG TTAACATTGG AGGCCATGTT 
    TTCAGAGGAA TTCTCTACGA TCAAGGTCCT GACGGGCGTT ACACCAGTAC AGGTGGTGAG 
    AGCTCATCCA GTGGAGCACA ACAACTTGGT CTTATAACAG CAGCAACAAC TAGCACCACA 
    GCAACTACAA CAAACACTGG TAATCCAGCT GCTGGCAATA CTTTGTTTGA TCCGTCTTCT 
    CTATATCCAG CTCCTCTCAA TGCTTTTATT GCTGGTACGC AATTCTTCCC ACCCCCAAGG 
    TCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002300732.1
    CDS1..966
    Translation

    Target ORF information:

    RefSeq Version XM_002300696.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa lateral root primordium family protein (POPTR_0002s03000g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002300696.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGCAGGGT GGTTCTATCT AGGTGAGAGA GAAGGGCCAT CAAGCAAACA AGATCAAGAG 
    AAAGAAGTCA ATAATAGTAG TTTGTTTTTG TACAGATCAT CAAACGAGGA GATCTACAAC 
    AACAACAAGG GGTTTGAGTT ATGGCCGCAG TATTATCCCC AGCAGCAAAA CATGAACAGC 
    TTCTCGTTTG GAGTGGGTCC TAGTCGAAGA AATTTCTCTG ATGATCACTC TCCAAGATCA 
    GGTTTTACAG TGATGAGACA AGGAGGAGGC TTAGGGGGAG GAATGAACTG TCAAGACTGC 
    GGGAACCAAG CTAAAAAAGA CTGTCCCCAT TCGAGATGTA GAACTTGTTG TAAGAGTCGA 
    GGGTTTCAGT GCCAAACACA CGTTAAGAGC ACTTGGGTCC CTGCTGCTAA AAGGAGAGAA 
    AGGCAGCAAC AACTAGCTGC TTTGCAACAA CAAAATCAAG AACAGCAACA GCAACAGCAA 
    CAGCAACAAC AGTTTCGAGG AGAGAATCCA AAAAGGCAGA GAGAGAATCA AGGTGGTGCT 
    TCCTCTCTTG CTTGCACTCG TTTAGCCACT ACCACGTCAG ATCAATTAGG GCTTGAAATG 
    ACAGCATTTC CACCAGAAGT GAATTCACAA GCCGTATTTC GTTGCGTTAA AGTAAGCGCC 
    CTGGACGATG CAGAAGATCA GTTAGCATAT CAAACGGCAG TTAACATTGG AGGCCATGTT 
    TTCAGAGGAA TTCTCTACGA TCAAGGTCCT GACGGGCGTT ACACCAGTAC AGGTGGTGAG 
    AGCTCATCCA GTGGAGCACA ACAACTTGGT CTTATAACAG CAGCAACAAC TAGCACCACA 
    GCAACTACAA CAAACACTGG TAATCCAGCT GCTGGCAATA CTTTGTTTGA TCCGTCTTCT 
    CTATATCCAG CTCCTCTCAA TGCTTTTATT GCTGGTACGC AATTCTTCCC ACCCCCAAGG 
    TCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0002s03000g ( XM_024594914.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024450682.1 Populus trichocarpa protein SHI RELATED SEQUENCE 5 (LOC7490677), mRNA.
    Price & Availability↑
    CloneID OPa424277
    Clone ID Related Accession (Same CDS sequence) XM_024594914.1
    Accession Version XM_024594914.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 957bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product protein SHI RELATED SEQUENCE 5
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAGGGT GGTTCTATCT AGGTGAGAGA GAAGGGCCAT CAAGCAAACA AGATCAAGAG 
    AAAGAAGTCA ATAATAGTAG TTTGTTTTTG TACAGATCAT CAAACGAGGA GATCTACAAC 
    AACAACAAGG GGTTTGAGTT ATGGCCGCAG TATTATCCCC AGCAGCAAAA CATGAACAGC 
    TTCTCGTTTG GAGTGGGTCC TAGTCGAAGA AATTTCTCTG ATGATCACTC TCCAAGATCA 
    GGTTTTACAG TGATGAGACA AGGAGGAGGC TTAGGGGGAG GAATGAACTG TCAAGACTGC 
    GGGAACCAAG CTAAAAAAGA CTGTCCCCAT TCGAGATGTA GAACTTGTTG TAAGAGTCGA 
    GGGTTTCAGT GCCAAACACA CGTTAAGAGC ACTTGGGTCC CTGCTGCTAA AAGGAGAGAA 
    AGGCAGCAAC AACTAGCTGC TTTGCAACAA CAAAATCAAG AACAGCAACA GCAACAGCAA 
    CAGCAACAAC AGTTTCGAGG AGAGAATCCA AAAAGGCAGA GAGAGAATCA AGGTGGTGCT 
    TCCTCTCTTG CTTGCACTCG TTTAGCCACT ACCACGTCAG GGCTTGAAAT GACAGCATTT 
    CCACCAGAAG TGAATTCACA AGCCGTATTT CGTTGCGTTA AAGTAAGCGC CCTGGACGAT 
    GCAGAAGATC AGTTAGCATA TCAAACGGCA GTTAACATTG GAGGCCATGT TTTCAGAGGA 
    ATTCTCTACG ATCAAGGTCC TGACGGGCGT TACACCAGTA CAGGTGGTGA GAGCTCATCC 
    AGTGGAGCAC AACAACTTGG TCTTATAACA GCAGCAACAA CTAGCACCAC AGCAACTACA 
    ACAAACACTG GTAATCCAGC TGCTGGCAAT ACTTTGTTTG ATCCGTCTTC TCTATATCCA 
    GCTCCTCTCA ATGCTTTTAT TGCTGGTACG CAATTCTTCC CACCCCCAAG GTCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024450682.1
    CDS855..1811
    Translation

    Target ORF information:

    RefSeq Version XM_024594914.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein SHI RELATED SEQUENCE 5 (LOC7490677), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024594914.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAGGGT GGTTCTATCT AGGTGAGAGA GAAGGGCCAT CAAGCAAACA AGATCAAGAG 
    AAAGAAGTCA ATAATAGTAG TTTGTTTTTG TACAGATCAT CAAACGAGGA GATCTACAAC 
    AACAACAAGG GGTTTGAGTT ATGGCCGCAG TATTATCCCC AGCAGCAAAA CATGAACAGC 
    TTCTCGTTTG GAGTGGGTCC TAGTCGAAGA AATTTCTCTG ATGATCACTC TCCAAGATCA 
    GGTTTTACAG TGATGAGACA AGGAGGAGGC TTAGGGGGAG GAATGAACTG TCAAGACTGC 
    GGGAACCAAG CTAAAAAAGA CTGTCCCCAT TCGAGATGTA GAACTTGTTG TAAGAGTCGA 
    GGGTTTCAGT GCCAAACACA CGTTAAGAGC ACTTGGGTCC CTGCTGCTAA AAGGAGAGAA 
    AGGCAGCAAC AACTAGCTGC TTTGCAACAA CAAAATCAAG AACAGCAACA GCAACAGCAA 
    CAGCAACAAC AGTTTCGAGG AGAGAATCCA AAAAGGCAGA GAGAGAATCA AGGTGGTGCT 
    TCCTCTCTTG CTTGCACTCG TTTAGCCACT ACCACGTCAG GGCTTGAAAT GACAGCATTT 
    CCACCAGAAG TGAATTCACA AGCCGTATTT CGTTGCGTTA AAGTAAGCGC CCTGGACGAT 
    GCAGAAGATC AGTTAGCATA TCAAACGGCA GTTAACATTG GAGGCCATGT TTTCAGAGGA 
    ATTCTCTACG ATCAAGGTCC TGACGGGCGT TACACCAGTA CAGGTGGTGA GAGCTCATCC 
    AGTGGAGCAC AACAACTTGG TCTTATAACA GCAGCAACAA CTAGCACCAC AGCAACTACA 
    ACAAACACTG GTAATCCAGC TGCTGGCAAT ACTTTGTTTG ATCCGTCTTC TCTATATCCA 
    GCTCCTCTCA ATGCTTTTAT TGCTGGTACG CAATTCTTCC CACCCCCAAG GTCCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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