POPTR_0002s03890g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0002s03890g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0002s03890g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa05690 XM_002302007.3
Latest version!
Populus trichocarpa rho-N domain-containing protein 1, chloroplastic (LOC7471964), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
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OPa05690 XM_002302007.2 Populus trichocarpa hypothetical protein (POPTR_0002s03890g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa05690
    Clone ID Related Accession (Same CDS sequence) XM_002302007.3 , XM_002302007.2
    Accession Version XM_002302007.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1170bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-08
    Organism Populus trichocarpa(black cottonwood)
    Product rho-N domain-containing protein 1, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002302007.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTCGCAAG CAGTCCATCT TGTCACCAAG AACCTTCCAG GTTATGGATC ATCAGAAGGC 
    AGGTGTCTCC CCTGCTCAGG AATTTCTGGT AGAGCAGTAG CTGTATCTCC TTGTTCTTCA
    CGTGGTGTCC ACTATGTTCA TTCACAGGCG CAGTTTGGAA AGATGAAATG TTCCTCCAGG
    GCTTCATCCA TTGTGTGCAA AAGTTCTGGC GGTCATAGGA GAAACCCAGA CTTTTCTAGG
    CAAAACAAAC AGGGGTTTTC ACGAAACAGA AACAGGCAAA ATGAAGAGGG AAATGGTTTT
    GAAAACCTTG ATGAATCTGA TCTGTTAACA TCAAAGAATG GGCCACTACT CTCCCTCTCT
    GGTACCCCAA AGTTCCAAGC CACTGCTGCC CCTGGGCCAA GAGAGAAGGA GATTGTTGAG
    CTATTCAGGA AGGTACAAGC TCAGCTGCGT GAAAGAGCTG CAGTCAAAGA AGAAAAAAAG
    GTTGAAGCTT CACAAGGAAA AGGTAGAGAA AATGAAACTG TGGATTCCCT CCTCAAGCTT
    CTCCGGAAAC ACTCAGTTGA GCAAGGTAAG AAAAAAACCA GCAATATCAG CAGTGGAGAC
    TTGAGTTTAG ACCAGCCAGA GAATGGAACA TACAAGAAAG CTAAAGGCAC AAGTTTCTTT
    GATTCAAGTA AGAAAGAAAG GAATGATGTC CTAGAGCCCA TCACCTCTTT TACCAGGCCA
    CCTTCGAATT TCCGACGGAA GTCTCCAGTA CCTCAAGTGA AATTCCAGCC CATTTATTCA
    AGTGAGGATC CTGTTAATTC TACATCTCAT TTAAATTTAA ATGGTGAGAA AAAGCAGCAG
    TTTGAGATAC TCCCAGACAC CACTCAGGAG CTTGAATTGG ACCCAGAATT GGATGCGGAG
    GAGGAGCATG AGTTGGATTC AGAGCCAGAG CCAGAGCCAG AGCCTTCTTT TGCTGGTGGG
    GATGTGTTTG ATGAGCTTTC TGAAGGTGAA TCTTCAGACA TGGATAATGT TGACGGGGAT
    GGTGAAAAAC AACAGCTAAT TGAACATGAG GATTTGAGTT CTTTAAAGCT ACCTGAGCTG
    AGAGCGCTTG CAAAGTCTCG CGGTGTAAAA GGGTTTTCAA AGATGAAGAA AGGCGAACTG
    GTGGAGTTGC TGAGTGGTAG TTCAATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002302043.1
    CDS117..1286
    Translation

    Target ORF information:

    RefSeq Version XM_002302007.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa rho-N domain-containing protein 1, chloroplastic (LOC7471964), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002302007.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTCGCAAG CAGTCCATCT TGTCACCAAG AACCTTCCAG GTTATGGATC ATCAGAAGGC 
    AGGTGTCTCC CCTGCTCAGG AATTTCTGGT AGAGCAGTAG CTGTATCTCC TTGTTCTTCA
    CGTGGTGTCC ACTATGTTCA TTCACAGGCG CAGTTTGGAA AGATGAAATG TTCCTCCAGG
    GCTTCATCCA TTGTGTGCAA AAGTTCTGGC GGTCATAGGA GAAACCCAGA CTTTTCTAGG
    CAAAACAAAC AGGGGTTTTC ACGAAACAGA AACAGGCAAA ATGAAGAGGG AAATGGTTTT
    GAAAACCTTG ATGAATCTGA TCTGTTAACA TCAAAGAATG GGCCACTACT CTCCCTCTCT
    GGTACCCCAA AGTTCCAAGC CACTGCTGCC CCTGGGCCAA GAGAGAAGGA GATTGTTGAG
    CTATTCAGGA AGGTACAAGC TCAGCTGCGT GAAAGAGCTG CAGTCAAAGA AGAAAAAAAG
    GTTGAAGCTT CACAAGGAAA AGGTAGAGAA AATGAAACTG TGGATTCCCT CCTCAAGCTT
    CTCCGGAAAC ACTCAGTTGA GCAAGGTAAG AAAAAAACCA GCAATATCAG CAGTGGAGAC
    TTGAGTTTAG ACCAGCCAGA GAATGGAACA TACAAGAAAG CTAAAGGCAC AAGTTTCTTT
    GATTCAAGTA AGAAAGAAAG GAATGATGTC CTAGAGCCCA TCACCTCTTT TACCAGGCCA
    CCTTCGAATT TCCGACGGAA GTCTCCAGTA CCTCAAGTGA AATTCCAGCC CATTTATTCA
    AGTGAGGATC CTGTTAATTC TACATCTCAT TTAAATTTAA ATGGTGAGAA AAAGCAGCAG
    TTTGAGATAC TCCCAGACAC CACTCAGGAG CTTGAATTGG ACCCAGAATT GGATGCGGAG
    GAGGAGCATG AGTTGGATTC AGAGCCAGAG CCAGAGCCAG AGCCTTCTTT TGCTGGTGGG
    GATGTGTTTG ATGAGCTTTC TGAAGGTGAA TCTTCAGACA TGGATAATGT TGACGGGGAT
    GGTGAAAAAC AACAGCTAAT TGAACATGAG GATTTGAGTT CTTTAAAGCT ACCTGAGCTG
    AGAGCGCTTG CAAAGTCTCG CGGTGTAAAA GGGTTTTCAA AGATGAAGAA AGGCGAACTG
    GTGGAGTTGC TGAGTGGTAG TTCAATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa05690
    Clone ID Related Accession (Same CDS sequence) XM_002302007.3 , XM_002302007.2
    Accession Version XM_002302007.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1170bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2013-12-30
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002302007.1.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTCGCAAG CAGTCCATCT TGTCACCAAG AACCTTCCAG GTTATGGATC ATCAGAAGGC 
    AGGTGTCTCC CCTGCTCAGG AATTTCTGGT AGAGCAGTAG CTGTATCTCC TTGTTCTTCA
    CGTGGTGTCC ACTATGTTCA TTCACAGGCG CAGTTTGGAA AGATGAAATG TTCCTCCAGG
    GCTTCATCCA TTGTGTGCAA AAGTTCTGGC GGTCATAGGA GAAACCCAGA CTTTTCTAGG
    CAAAACAAAC AGGGGTTTTC ACGAAACAGA AACAGGCAAA ATGAAGAGGG AAATGGTTTT
    GAAAACCTTG ATGAATCTGA TCTGTTAACA TCAAAGAATG GGCCACTACT CTCCCTCTCT
    GGTACCCCAA AGTTCCAAGC CACTGCTGCC CCTGGGCCAA GAGAGAAGGA GATTGTTGAG
    CTATTCAGGA AGGTACAAGC TCAGCTGCGT GAAAGAGCTG CAGTCAAAGA AGAAAAAAAG
    GTTGAAGCTT CACAAGGAAA AGGTAGAGAA AATGAAACTG TGGATTCCCT CCTCAAGCTT
    CTCCGGAAAC ACTCAGTTGA GCAAGGTAAG AAAAAAACCA GCAATATCAG CAGTGGAGAC
    TTGAGTTTAG ACCAGCCAGA GAATGGAACA TACAAGAAAG CTAAAGGCAC AAGTTTCTTT
    GATTCAAGTA AGAAAGAAAG GAATGATGTC CTAGAGCCCA TCACCTCTTT TACCAGGCCA
    CCTTCGAATT TCCGACGGAA GTCTCCAGTA CCTCAAGTGA AATTCCAGCC CATTTATTCA
    AGTGAGGATC CTGTTAATTC TACATCTCAT TTAAATTTAA ATGGTGAGAA AAAGCAGCAG
    TTTGAGATAC TCCCAGACAC CACTCAGGAG CTTGAATTGG ACCCAGAATT GGATGCGGAG
    GAGGAGCATG AGTTGGATTC AGAGCCAGAG CCAGAGCCAG AGCCTTCTTT TGCTGGTGGG
    GATGTGTTTG ATGAGCTTTC TGAAGGTGAA TCTTCAGACA TGGATAATGT TGACGGGGAT
    GGTGAAAAAC AACAGCTAAT TGAACATGAG GATTTGAGTT CTTTAAAGCT ACCTGAGCTG
    AGAGCGCTTG CAAAGTCTCG CGGTGTAAAA GGGTTTTCAA AGATGAAGAA AGGCGAACTG
    GTGGAGTTGC TGAGTGGTAG TTCAATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002302043.1
    CDS80..1249
    Translation

    Target ORF information:

    RefSeq Version XM_002302007.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0002s03890g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002302007.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTCGCAAG CAGTCCATCT TGTCACCAAG AACCTTCCAG GTTATGGATC ATCAGAAGGC 
    AGGTGTCTCC CCTGCTCAGG AATTTCTGGT AGAGCAGTAG CTGTATCTCC TTGTTCTTCA
    CGTGGTGTCC ACTATGTTCA TTCACAGGCG CAGTTTGGAA AGATGAAATG TTCCTCCAGG
    GCTTCATCCA TTGTGTGCAA AAGTTCTGGC GGTCATAGGA GAAACCCAGA CTTTTCTAGG
    CAAAACAAAC AGGGGTTTTC ACGAAACAGA AACAGGCAAA ATGAAGAGGG AAATGGTTTT
    GAAAACCTTG ATGAATCTGA TCTGTTAACA TCAAAGAATG GGCCACTACT CTCCCTCTCT
    GGTACCCCAA AGTTCCAAGC CACTGCTGCC CCTGGGCCAA GAGAGAAGGA GATTGTTGAG
    CTATTCAGGA AGGTACAAGC TCAGCTGCGT GAAAGAGCTG CAGTCAAAGA AGAAAAAAAG
    GTTGAAGCTT CACAAGGAAA AGGTAGAGAA AATGAAACTG TGGATTCCCT CCTCAAGCTT
    CTCCGGAAAC ACTCAGTTGA GCAAGGTAAG AAAAAAACCA GCAATATCAG CAGTGGAGAC
    TTGAGTTTAG ACCAGCCAGA GAATGGAACA TACAAGAAAG CTAAAGGCAC AAGTTTCTTT
    GATTCAAGTA AGAAAGAAAG GAATGATGTC CTAGAGCCCA TCACCTCTTT TACCAGGCCA
    CCTTCGAATT TCCGACGGAA GTCTCCAGTA CCTCAAGTGA AATTCCAGCC CATTTATTCA
    AGTGAGGATC CTGTTAATTC TACATCTCAT TTAAATTTAA ATGGTGAGAA AAAGCAGCAG
    TTTGAGATAC TCCCAGACAC CACTCAGGAG CTTGAATTGG ACCCAGAATT GGATGCGGAG
    GAGGAGCATG AGTTGGATTC AGAGCCAGAG CCAGAGCCAG AGCCTTCTTT TGCTGGTGGG
    GATGTGTTTG ATGAGCTTTC TGAAGGTGAA TCTTCAGACA TGGATAATGT TGACGGGGAT
    GGTGAAAAAC AACAGCTAAT TGAACATGAG GATTTGAGTT CTTTAAAGCT ACCTGAGCTG
    AGAGCGCTTG CAAAGTCTCG CGGTGTAAAA GGGTTTTCAA AGATGAAGAA AGGCGAACTG
    GTGGAGTTGC TGAGTGGTAG TTCAATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,D?jardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasj?rvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Lepl? JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouz? P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D