ccdc39 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene
Clones
gRNAs

Summary

Gene Symbol	ccdc39
Entrez Gene ID	779795
Full Name	coiled-coil domain containing 39
General protein information	Preferred Names coiled-coil domain containing 39 Names coiled-coil domain-containing protein 39
Gene Type	protein-coding
Organism	Xenopus tropicalis(tropical clawed frog)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001078874.1	NP_001072342.1	coiled-coil domain-containing protein 39

Pathways from BioSystems

Homologies

Bos taurus (cattle)	CCDC39	NP_001192985.1
Gallus gallus (chicken)	CCDC39	XP_422777.3
Xenopus tropicalis (tropical clawed frog)	ccdc39	NP_001072342.1
Canis lupus familiaris (dog)	CCDC39	XP_545213.3
Rattus norvegicus (Norway rat)	Ccdc39	NP_001101137.1
Danio rerio (zebrafish)	ccdc39	XP_682709.6
Homo sapiens (human)	CCDC39	NP_852091.1
Pan troglodytes (chimpanzee)	CCDC39	XP_003310174.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001293	XP_321854.5
Mus musculus (house mouse)	Ccdc39	NP_080498.1
Drosophila melanogaster (fruit fly)	CG17387	NP_649495.1

Gene Ontology
Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ccdc39 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ccdc39 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OXa00068	NM_001078874.1 Latest version!	Xenopus tropicalis coiled-coil domain containing 39 (ccdc39), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ccdc39 ( NM_001078874.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> NP_001072342.1 Xenopus tropicalis coiled-coil domain containing 39 (ccdc39), mRNA.

Price & Availability↑

CloneID	OXa00068
Clone ID Related Accession (Same CDS sequence)	NM_001078874.1
Accession Version	NM_001078874.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2838bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-24
Organism	Xenopus tropicalis(tropical clawed frog)
Product	coiled-coil domain-containing protein 39
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC121424.1. ##Evidence-Data-START## Transcript exon combination :: BC121424.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028291, SAMD00028292 [ECO:0000348] ##Evidence-Data-END##

ATGAACCGTA AGGTGCTGGA CGAGCTTAGA TGGGACGATG GCTATGCCAT TCCCGTGGCC 
AATGCGGAGA ATAAAACCCT GGAGGAAGAG ATGCAGAAGA AAGAAAAGGA AAAGATCCAA 
TTGTCGAACC AAGTGAAGGG ATTCGAAGAA CGAATCCAAG CAATGGCAGA CCATCTCAGG 
AATGTCAGAC AGGAGTTGAC ATACACTCAA TCCCTCGTAA GGGCCAGGGA AAATGAGACA 
GAGAGTGAAG AACACTTCAA GACACTGTCA GAAAGGGAAA TTGGACGTCT CAAACAAGAA 
ATTCAAAGGC TTGAAAATGA GCTAGTGTCC TTGAGAGAAA AGAAAAACAG CCATGAAAAC 
AACATATTCA AAACCACTCA AAAGCTGGAA AATCTTAAGC GTCAGCTTAA CTGGGACCAG 
CAGACTTTGG AAGCTTGGCT CGAAGAATCT GCACGCAAAG ATGAAGATTC CATGGCAATA 
CAAAAATATT CCCAGAAAGA TGATGGAAAA ATTAAAGAAC TGTCACTGCT GATTGAAAAA 
CTGACTCTGG AGGCTGGTCA GAAACGTAAA CTTATGGACA ATGAGTTGAC AGAGACTATC 
ACTGCACAGA TAGAGCTGGA CAAAACAGCT GAAGATTTTC GGAAAGCTCA TACTGAAAGA 
CAGCAACTGA TTAGTCAGTG GGAAAGCACC ATAGGACAAA TGCAGAAAAG GGACAGAGAC 
ATTGATCACT GTGCAATGTT ACTAGCCCAG GTCAAACAGG AGCTAAGAGA AAAAGAAAGT 
ATAATCAAAG AGAAAATTCA GTTCCTGCAA AGTGAAATTG ACAATAATAA GGAATATGAG 
AAAAAGATTT CTGCTGCAGA ACGACAGGCT GCAAAGCTGA GATTGGAGCT GCAGGAACAA 
GAGATCATCC GAGGTCGTCT GCAAGATGAG CTGGATTCTT TAAAAGGTGT TGTTGATCGG 
ACAGCTAGTG ACTTAGAGAC TATGAGAACA GAGGTTACCA GTCTAAAGAA AGACATCCGG 
AATAGGCAAA ACAGGCTACA AATGGCACAA GAATATAATG ATGGCCTATC TGACAAGCTT 
AACTTTGTCA CTGAATCAGC CTTAAGTCTG GAAGAAAGAG CTTTACGGAT GGAAGAAATG 
TTCAAGGAAC AAGAAAAAAC TGTTAAGGAT CTTGAAGTCC AGTTAAAACA GATAAGGGAA 
ATACTTTTCA AAAAATCTCA GGAGCTGCAT GAGTGTAAAG CAAAAGAAAA GGACGTCATA 
GCAGAAATCA ATGGAGGCCA AGTTACACTC AAGAATCTCA ATAGTCAACT ACAAAAACTT 
GACTCACATG CTCTAAAGCA GCAAGGAATA ATGTACAATC AGGATTTTCA GATCCAGCAA 
TTAGAGAGAC GGCTATCACG TTTAAAAGGT GAGGTCAATA CAGATGAGAA GCAAGCCTTG 
GAAATGAGGG TATCGCAGCT TACTAAAGTA TTTGAGGAGC GCAGAGCTGC ATTAAAACTA 
TTGAATACCC AGCACAAGAA ACTCCAGGGG GATGTGCGTT ATATCAAAAG GGAACTTGAA 
AAAACTGGCC AGGAAAAGGG AGATTTGATC AGCAAAAAGG AAGAATTTAA TCTCTTCAAT 
ATGATGTCTG AAAAGACTCT GAAAAAGATC AAAGCATCTA AGCAGGATTT AATGGTTGAA 
GACAATATTT TAAAGCTGGA AATAAAAAGG CTAAGGGACA TGCTCTACAG TAAGGCAGAT 
GATGTTTTCT CACTGGAAAA ACGCAAGTTG CAGTTACAAA CTGCAATGAA AGAACGAACC 
GAAGAGATTT CAGTCCACAA AGAAATGCTT AAATCACATA TAAGATACGT GGATCAGGAA 
CGCCAAAATA TAAGTTCACA GCTTCATGAG AGACTTGCAA AAGTTGAGAA AATGAGGAAG 
AGGTTTGAAA TACTAACTAT TGCAATGATG CCACCAGAGG GTGAAGAAGA GAAATCTCAG 
GCCTATTACG TAGTTAAGGC TGCTCAGGAA AAGGAGGAGC TACAGCGAGT AGGTGATGAT 
CTGGATGGGA AAATTCGTAA AGCTGAAAAA GAGATCAGGG CTTTAGAAAA CACCCTGCGA 
GTTATTAATG GGTGTAATAC CTCTTTCAAA AAATCATTTT CCAAAATCAC AGAAACAAGT 
GAAGAATACG ACGAAAAAGT TCAACTTGAA GAAGAAAAAA AAGCTGCAGA AGAAAAGCAT 
CGATACAAAC AGAGGCAGAT TAGGGAACTG CAGGAAGATA CGCAGGTTAT GAAAAACACA 
TTTGATAGCA TGATAAATGA GGAACTGTCC TATCAAGAGA AAGCAAAGGA ACTGCTTCCA 
GCCATTACCC AACTTAACAA AGAAACAGAG GACCAAAAGC AAAAACTGGA AAGAGTATTG 
AAACAGTATT CCAAATTGTC AAAACATGTC CGAAATGCTA AGAAAAGCAA AGAAGAAACA 
CAAGAGGAAA AAGATATTAA TGTTCGGGAT CTGCGAGACT TCAACCAATC CTTAAACAAG 
ATGCTGGCTC AAGCAATGGA GAAGAATCCG GACTTAGCCA CAGCCCTTCA GTTATACTTT 
CATCAGTTTG GTTTAGAAAT ACCTACAATT GGGTCAACTC CTGGAAGTTA CAGTTCTAGA 
TCAAGTTCAT CACGTAGTTC CACTATTTCC GTCAGATCAG GCACATCCAG GATATCAGTC 
AATTCTGGTC AATCTCCCCG GATTAAAGTA GTGGACCTAG GACTGCCTCC TGCCTGTCCT 
TCATCAAATG TATCATCTGC CCGGAGCTCC AGGACATCAT CCAGGAGTGG CTCGTCAAAA 
AGCCAGAAAC AGGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001072342.1
CDS	105..2942
Translation	MNRKVLDELRWDDGYAIPVANAENKTLEEEMQKKEKEKIQLSNQVKGFEERIQAMADHLRNVRQELTYTQSLVRARENETESEEHFKTLSEREIGRLKQEIQRLENELVSLREKKNSHENNIFKTTQKLENLKRQLNWDQQTLEAWLEESARKDEDSMAIQKYSQKDDGKIKELSLLIEKLTLEAGQKRKLMDNELTETITAQIELDKTAEDFRKAHTERQQLISQWESTIGQMQKRDRDIDHCAMLLAQVKQELREKESIIKEKIQFLQSEIDNNKEYEKKISAAERQAAKLRLELQEQEIIRGRLQDELDSLKGVVDRTASDLETMRTEVTSLKKDIRNRQNRLQMAQEYNDGLSDKLNFVTESALSLEERALRMEEMFKEQEKTVKDLEVQLKQIREILFKKSQELHECKAKEKDVIAEINGGQVTLKNLNSQLQKLDSHALKQQGIMYNQDFQIQQLERRLSRLKGEVNTDEKQALEMRVSQLTKVFEERRAALKLLNTQHKKLQGDVRYIKRELEKTGQEKGDLISKKEEFNLFNMMSEKTLKKIKASKQDLMVEDNILKLEIKRLRDMLYSKADDVFSLEKRKLQLQTAMKERTEEISVHKEMLKSHIRYVDQERQNISSQLHERLAKVEKMRKRFEILTIAMMPPEGEEEKSQAYYVVKAAQEKEELQRVGDDLDGKIRKAEKEIRALENTLRVINGCNTSFKKSFSKITETSEEYDEKVQLEEEKKAAEEKHRYKQRQIRELQEDTQVMKNTFDSMINEELSYQEKAKELLPAITQLNKETEDQKQKLERVLKQYSKLSKHVRNAKKSKEETQEEKDINVRDLRDFNQSLNKMLAQAMEKNPDLATALQLYFHQFGLEIPTIGSTPGSYSSRSSSSRSSTISVRSGTSRISVNSGQSPRIKVVDLGLPPACPSSNVSSARSSRTSSRSGSSKSQKQE

Target ORF information:

RefSeq Version	NM_001078874.1
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis coiled-coil domain containing 39 (ccdc39), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001078874.1

ORF Insert Sequence:

ATGAACCGTA AGGTGCTGGA CGAGCTTAGA TGGGACGATG GCTATGCCAT TCCCGTGGCC 
AATGCGGAGA ATAAAACCCT GGAGGAAGAG ATGCAGAAGA AAGAAAAGGA AAAGATCCAA 
TTGTCGAACC AAGTGAAGGG ATTCGAAGAA CGAATCCAAG CAATGGCAGA CCATCTCAGG 
AATGTCAGAC AGGAGTTGAC ATACACTCAA TCCCTCGTAA GGGCCAGGGA AAATGAGACA 
GAGAGTGAAG AACACTTCAA GACACTGTCA GAAAGGGAAA TTGGACGTCT CAAACAAGAA 
ATTCAAAGGC TTGAAAATGA GCTAGTGTCC TTGAGAGAAA AGAAAAACAG CCATGAAAAC 
AACATATTCA AAACCACTCA AAAGCTGGAA AATCTTAAGC GTCAGCTTAA CTGGGACCAG 
CAGACTTTGG AAGCTTGGCT CGAAGAATCT GCACGCAAAG ATGAAGATTC CATGGCAATA 
CAAAAATATT CCCAGAAAGA TGATGGAAAA ATTAAAGAAC TGTCACTGCT GATTGAAAAA 
CTGACTCTGG AGGCTGGTCA GAAACGTAAA CTTATGGACA ATGAGTTGAC AGAGACTATC 
ACTGCACAGA TAGAGCTGGA CAAAACAGCT GAAGATTTTC GGAAAGCTCA TACTGAAAGA 
CAGCAACTGA TTAGTCAGTG GGAAAGCACC ATAGGACAAA TGCAGAAAAG GGACAGAGAC 
ATTGATCACT GTGCAATGTT ACTAGCCCAG GTCAAACAGG AGCTAAGAGA AAAAGAAAGT 
ATAATCAAAG AGAAAATTCA GTTCCTGCAA AGTGAAATTG ACAATAATAA GGAATATGAG 
AAAAAGATTT CTGCTGCAGA ACGACAGGCT GCAAAGCTGA GATTGGAGCT GCAGGAACAA 
GAGATCATCC GAGGTCGTCT GCAAGATGAG CTGGATTCTT TAAAAGGTGT TGTTGATCGG 
ACAGCTAGTG ACTTAGAGAC TATGAGAACA GAGGTTACCA GTCTAAAGAA AGACATCCGG 
AATAGGCAAA ACAGGCTACA AATGGCACAA GAATATAATG ATGGCCTATC TGACAAGCTT 
AACTTTGTCA CTGAATCAGC CTTAAGTCTG GAAGAAAGAG CTTTACGGAT GGAAGAAATG 
TTCAAGGAAC AAGAAAAAAC TGTTAAGGAT CTTGAAGTCC AGTTAAAACA GATAAGGGAA 
ATACTTTTCA AAAAATCTCA GGAGCTGCAT GAGTGTAAAG CAAAAGAAAA GGACGTCATA 
GCAGAAATCA ATGGAGGCCA AGTTACACTC AAGAATCTCA ATAGTCAACT ACAAAAACTT 
GACTCACATG CTCTAAAGCA GCAAGGAATA ATGTACAATC AGGATTTTCA GATCCAGCAA 
TTAGAGAGAC GGCTATCACG TTTAAAAGGT GAGGTCAATA CAGATGAGAA GCAAGCCTTG 
GAAATGAGGG TATCGCAGCT TACTAAAGTA TTTGAGGAGC GCAGAGCTGC ATTAAAACTA 
TTGAATACCC AGCACAAGAA ACTCCAGGGG GATGTGCGTT ATATCAAAAG GGAACTTGAA 
AAAACTGGCC AGGAAAAGGG AGATTTGATC AGCAAAAAGG AAGAATTTAA TCTCTTCAAT 
ATGATGTCTG AAAAGACTCT GAAAAAGATC AAAGCATCTA AGCAGGATTT AATGGTTGAA 
GACAATATTT TAAAGCTGGA AATAAAAAGG CTAAGGGACA TGCTCTACAG TAAGGCAGAT 
GATGTTTTCT CACTGGAAAA ACGCAAGTTG CAGTTACAAA CTGCAATGAA AGAACGAACC 
GAAGAGATTT CAGTCCACAA AGAAATGCTT AAATCACATA TAAGATACGT GGATCAGGAA 
CGCCAAAATA TAAGTTCACA GCTTCATGAG AGACTTGCAA AAGTTGAGAA AATGAGGAAG 
AGGTTTGAAA TACTAACTAT TGCAATGATG CCACCAGAGG GTGAAGAAGA GAAATCTCAG 
GCCTATTACG TAGTTAAGGC TGCTCAGGAA AAGGAGGAGC TACAGCGAGT AGGTGATGAT 
CTGGATGGGA AAATTCGTAA AGCTGAAAAA GAGATCAGGG CTTTAGAAAA CACCCTGCGA 
GTTATTAATG GGTGTAATAC CTCTTTCAAA AAATCATTTT CCAAAATCAC AGAAACAAGT 
GAAGAATACG ACGAAAAAGT TCAACTTGAA GAAGAAAAAA AAGCTGCAGA AGAAAAGCAT 
CGATACAAAC AGAGGCAGAT TAGGGAACTG CAGGAAGATA CGCAGGTTAT GAAAAACACA 
TTTGATAGCA TGATAAATGA GGAACTGTCC TATCAAGAGA AAGCAAAGGA ACTGCTTCCA 
GCCATTACCC AACTTAACAA AGAAACAGAG GACCAAAAGC AAAAACTGGA AAGAGTATTG 
AAACAGTATT CCAAATTGTC AAAACATGTC CGAAATGCTA AGAAAAGCAA AGAAGAAACA 
CAAGAGGAAA AAGATATTAA TGTTCGGGAT CTGCGAGACT TCAACCAATC CTTAAACAAG 
ATGCTGGCTC AAGCAATGGA GAAGAATCCG GACTTAGCCA CAGCCCTTCA GTTATACTTT 
CATCAGTTTG GTTTAGAAAT ACCTACAATT GGGTCAACTC CTGGAAGTTA CAGTTCTAGA 
TCAAGTTCAT CACGTAGTTC CACTATTTCC GTCAGATCAG GCACATCCAG GATATCAGTC 
AATTCTGGTC AATCTCCCCG GATTAAAGTA GTGGACCTAG GACTGCCTCC TGCCTGTCCT 
TCATCAAATG TATCATCTGC CCGGAGCTCC AGGACATCAT CCAGGAGTGG CTCGTCAAAA 
AGCCAGAAAC AGGAGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P

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ccdc39 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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