ORF » Species Summary » Xenopus tropicalis » bloc1s1 cDNA ORF clone

bloc1s1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

  • Gene

  • Clones

  • gRNAs

The following bloc1s1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the bloc1s1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa00663 NM_001078781.1
Latest version!		 Xenopus tropicalis biogenesis of lysosomal organelles complex 1 subunit 1 (bloc1s1), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OXa03046 NM_001017271.2
Latest version!		 Xenopus tropicalis biogenesis of lysosomal organelles complex 1 subunit 1 (bloc1s1), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OXa29106 XM_012957223.2
Latest version!		 Xenopus tropicalis biogenesis of lysosomal organelles complex-1, subunit 1 (bloc1s1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    bloc1s1 ( NM_001078781.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> NP_001072249.1 Xenopus tropicalis biogenesis of lysosomal organelles complex 1 subunit 1 (bloc1s1), transcript variant 1, mRNA.
    Price & Availability↑
    CloneID OXa00663
    Clone ID Related Accession (Same CDS sequence) NM_001078781.1
    Accession Version NM_001078781.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 378bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-22
    Organism Xenopus tropicalis(tropical clawed frog)
    Product biogenesis of lysosome-related organelles complex 1 subunit 1 isoform 1
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC118866.1. Transcript Variant: This variant (1) encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: BC118866.1, DT414189.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    ATGCTGTCCC GACTCCTTAA GGAGCACCAA GGCAAGCAGA CGGAACGGAA AGAAGCGCAA 
    GAAAAGAGGA GGAAGGATGC GATTGCTGCA GCTACTACTT TGACGGAAGC ATTGGTAGAT 
    CATCTAAATG TGGGTGTGGC GCAAGCATAC GTGAACCAAA GAAAGTTGGA CCATGAGGTG 
    AAGACGTTGC AGACCCAGGC TGCCCAGTTT GCAAAGCAAA CAACCCAGTG GATTAGTTTA 
    GTGGAGAACT TTAACCAGGC CCTAAAAGAA ATTGGTGATG TGGAAAACTG GGCCAGAAGC 
    ATTGAAAAGG ATATGCGCAT TATAGCTACT GCTCTAGAAT ACGTATACAA GGGGCAACTG 
    CAGCCTTCTG CCTCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001072249.1
    CDS23..400
    Translation

    Target ORF information:

    RefSeq Version NM_001078781.1
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis biogenesis of lysosomal organelles complex 1 subunit 1 (bloc1s1), transcript variant 1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001078781.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    ATGCTGTCCC GACTCCTTAA GGAGCACCAA GGCAAGCAGA CGGAACGGAA AGAAGCGCAA 
    GAAAAGAGGA GGAAGGATGC GATTGCTGCA GCTACTACTT TGACGGAAGC ATTGGTAGAT 
    CATCTAAATG TGGGTGTGGC GCAAGCATAC GTGAACCAAA GAAAGTTGGA CCATGAGGTG 
    AAGACGTTGC AGACCCAGGC TGCCCAGTTT GCAAAGCAAA CAACCCAGTG GATTAGTTTA 
    GTGGAGAACT TTAACCAGGC CCTAAAAGAA ATTGGTGATG TGGAAAACTG GGCCAGAAGC 
    ATTGAAAAGG ATATGCGCAT TATAGCTACT GCTCTAGAAT ACGTATACAA GGGGCAACTG 
    CAGCCTTCTG CCTCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    bloc1s1 ( NM_001017271.2 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> NP_001017271.1 Xenopus tropicalis biogenesis of lysosomal organelles complex 1 subunit 1 (bloc1s1), transcript variant 2, mRNA.
    Price & Availability↑
    CloneID OXa03046
    Clone ID Related Accession (Same CDS sequence) NM_001017271.2
    Accession Version NM_001017271.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 330bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-22
    Organism Xenopus tropicalis(tropical clawed frog)
    Product biogenesis of lysosome-related organelles complex 1 subunit 1 isoform 2
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR855794.2. On Oct 14, 2005 this sequence version replaced NM_001017271.1. Transcript Variant: This variant (2) uses an alternate splice site at the 3' end, compared to variant 1. This difference results in a shorter protein (isoform 2) with a distinct 3' coding region, compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: CR855794.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    ATGCTGTCCC GACTCCTTAA GGAGCACCAA GGCAAGCAGA CGGAACGGAA AGAAGCGCAA 
    GAAAAGAGGA GGAAGGATGC GATTGCTGCA GCTACTACTT TGACGGAAGC ATTGGTAGAT 
    CATCTAAATG TGGGTGTGGC GCAAGCATAC GTGAACCAAA GAAAGTTGGA CCATGAGGTG 
    AAGACGTTGC AGACCCAGGC TGCCCAGTTT GCAAAGCAAA CAACCCAGTG GATTAGTTTA 
    GTGGAGAACT TTAACCAGGC CCTAAAAGTG AGTGCTGTGG CCAAGTACTT CCTTAATAAG 
    CATATTAAGC CCCTGGTTTG GTACAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001017271.1
    CDS155..484
    Translation

    Target ORF information:

    RefSeq Version NM_001017271.2
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis biogenesis of lysosomal organelles complex 1 subunit 1 (bloc1s1), transcript variant 2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001017271.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    ATGCTGTCCC GACTCCTTAA GGAGCACCAA GGCAAGCAGA CGGAACGGAA AGAAGCGCAA 
    GAAAAGAGGA GGAAGGATGC GATTGCTGCA GCTACTACTT TGACGGAAGC ATTGGTAGAT 
    CATCTAAATG TGGGTGTGGC GCAAGCATAC GTGAACCAAA GAAAGTTGGA CCATGAGGTG 
    AAGACGTTGC AGACCCAGGC TGCCCAGTTT GCAAAGCAAA CAACCCAGTG GATTAGTTTA 
    GTGGAGAACT TTAACCAGGC CCTAAAAGTG AGTGCTGTGG CCAAGTACTT CCTTAATAAG 
    CATATTAAGC CCCTGGTTTG GTACAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    bloc1s1 ( XM_012957223.2 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012812677.1 Xenopus tropicalis biogenesis of lysosomal organelles complex-1, subunit 1 (bloc1s1), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OXa29106
    Clone ID Related Accession (Same CDS sequence) XM_012957223.2
    Accession Version XM_012957223.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 438bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-09-07
    Organism Xenopus tropicalis(tropical clawed frog)
    Product biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012957223.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    ATGGCGGCCA ATCAAAATCT TTTGTCCCAC TTGATCAATG AGACGGCAGA TATCCAAGGC 
    TTTGCGATAG CGGTTGTCTT GTCGATCGTC CATACACGCA CCGAATATCG TACGAAACGA 
    GAAAAGAGGA GGAAGGATGC GATTGCTGCA GCTACTACTT TGACGGAAGC ATTGGTAGAT 
    CATCTAAATG TGGGTGTGGC GCAAGCATAC GTGAACCAAA GAAAGTTGGA CCATGAGGTG 
    AAGACGTTGC AGACCCAGGC TGCCCAGTTT GCAAAGCAAA CAACCCAGTG GATTAGTTTA 
    GTGGAGAACT TTAACCAGGC CCTAAAAGAA ATTGGTGATG TGGAAAACTG GGCCAGAAGC 
    ATTGAAAAGG ATATGCGCAT TATAGCTACT GCTCTAGAAT ACGTATACAA GGGGCAACTG 
    CAGCCTTCTG CCTCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_012812677.1
    CDS26..463
    Translation

    Target ORF information:

    RefSeq Version XM_012957223.2
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis biogenesis of lysosomal organelles complex-1, subunit 1 (bloc1s1), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_012957223.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    ATGGCGGCCA ATCAAAATCT TTTGTCCCAC TTGATCAATG AGACGGCAGA TATCCAAGGC 
    TTTGCGATAG CGGTTGTCTT GTCGATCGTC CATACACGCA CCGAATATCG TACGAAACGA 
    GAAAAGAGGA GGAAGGATGC GATTGCTGCA GCTACTACTT TGACGGAAGC ATTGGTAGAT 
    CATCTAAATG TGGGTGTGGC GCAAGCATAC GTGAACCAAA GAAAGTTGGA CCATGAGGTG 
    AAGACGTTGC AGACCCAGGC TGCCCAGTTT GCAAAGCAAA CAACCCAGTG GATTAGTTTA 
    GTGGAGAACT TTAACCAGGC CCTAAAAGAA ATTGGTGATG TGGAAAACTG GGCCAGAAGC 
    ATTGAAAAGG ATATGCGCAT TATAGCTACT GCTCTAGAAT ACGTATACAA GGGGCAACTG 
    CAGCCTTCTG CCTCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of the Western clawed frog Xenopus tropicalis.
    Science (New York, N.Y.)328(5978)633-6(2010 Apr)
    Hellsten U,Harland RM,Gilchrist MJ,Hendrix D,Jurka J,Kapitonov V,Ovcharenko I,Putnam NH,Shu S,Taher L,Blitz IL,Blumberg B,Dichmann DS,Dubchak I,Amaya E,Detter JC,Fletcher R,Gerhard DS,Goodstein D,Graves T,Grigoriev IV,Grimwood J,Kawashima T,Lindquist E,Lucas SM,Mead PE,Mitros T,Ogino H,Ohta Y,Poliakov AV,Pollet N,Robert J,Salamov A,Sater AK,Schmutz J,Terry A,Vize PD,Warren WC,Wells D,Wills A,Wilson RK,Zimmerman LB,Zorn AM,Grainger R,Grammer T,Khokha MK,Richardson PM,Rokhsar DS


    Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
    Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
    Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P


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