ORF » Species Summary » Xenopus tropicalis » tdp1 cDNA ORF clone

tdp1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

  • Gene

  • Clones

  • gRNAs

The following tdp1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tdp1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa24914 NM_001045777.1
Latest version!		 Xenopus tropicalis tyrosyl-DNA phosphodiesterase 1 (tdp1), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
OXa63750 XM_031890524.1
Latest version!		 Xenopus tropicalis tyrosyl-DNA phosphodiesterase 1 (tdp1), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OXa63751 XM_031890526.1
Latest version!		 Xenopus tropicalis tyrosyl-DNA phosphodiesterase 1 (tdp1), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    tdp1 ( NM_001045777.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> NP_001039242.1 Xenopus tropicalis tyrosyl-DNA phosphodiesterase 1 (tdp1), mRNA.
    Price & Availability↑
    CloneID OXa24914
    Clone ID Related Accession (Same CDS sequence) NM_001045777.1
    Accession Version NM_001045777.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1794bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-21
    Organism Xenopus tropicalis(tropical clawed frog)
    Product tyrosyl-DNA phosphodiesterase 1
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CR942767.1. ##Evidence-Data-START## Transcript exon combination :: CR942767.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGACAGGA CCTCAGCTTC CCAACAGAGT AATTATGGTA AATGGACCTT ATCTAGCAGT 
    GAGGATGAAA CAGAGGACAG TGGAATACCA TCTCCTCCAT CAAGTAGTAG AGAGAGTCGG 
    GATTCTGTTC CTCATTACCC CTGCTCCGAT GCCAGAAAAG CATCTCACAA AAGAAAGGCG 
    AATCCAGTTA AATTTAAAGA GATGTCTAAA AAGGAATTGA TTCCTGCCAA GAAAATAAAA 
    ACTGAGACTG AAGTTTCAGG ATGGTGCTTA TCGAGTAGTG ATGAAGAATC GAAACCTACC 
    CAAGTTGAAC AAAAAGGGAA CATTAAAGCA GACAAAATAG AGGTGCTAGT GCAAAGCAAA 
    AAAATACAAG AAAACATAGA GGTGAAGCAA AAAAAATGCA AGACACCAAG TGATTCTCAA 
    GACACATGGG ACCTGCTCCA GGCTGGTGAG CCTTTCCGCT TCTACCTTAC TAAAGTTATG 
    GGGATCAAAC CTAAATACAA CTCAGGTGCA CTTCACATAA AAGATATTTT ATCTCCTCTT 
    TTTGGGACAC TTGTATCTTC AGCACAGTTC AACTATTGCT TTGATATTAA GTGGCTAGTG 
    AAACAATATC CTGAAGAATT TAGAGACAAG CCACTGCTTA TTGTTCATGG TGAGAAGAGA 
    GAATCAAAAG CTAAACTACA TGAGGATGCT CACCCTTACG AACACATCCG TCTGTGTCAG 
    GCCAAGTTGG ATATCGCCTT TGGGACCCAC CACACGAAAA TGATGTTGCT GTTGTACACA 
    GAGGGTCTTA GAGTTGTAAT CCATACCAGT AACCTTATCC ATGAAGATTG GTACCAGAAA 
    ACACAAGGTA TTTGGTTAAG CCCATTGTAT CCTCGGCTTC CTGAAGGAGC TTCGGTTTCT 
    GCAGGTGAAT CTTCTACAAA TTTTCGATCT GACCTTGTAG CATATTTAGC CTCTTACAAT 
    TCTCCGAGCC TAAGAGAGTG GATGGATATC ATTAAGCAGC ATGATCTCTC AGAAACAAGG 
    GTATACCTAA TTGGATCAAC ACCAGGAAGA TTTCAAGGAA ATGACAAAGA TAAATGGGGA 
    CATTTCCGTT TGAGAAAGCT ATTAAGAGAA AACACATCTG CAGCACCAGG GCAGGAAACA 
    TGGCCAGTGA TTGGACAGTT TTCAAGCATA GGATCCATGG GTGTGGACAA AACCAAGTGG 
    CTATGCTCAG AATTCACTGA AAGTCTGACA ACCCTGGGAA AAAGCATCAA AAGTCTACAG 
    AAAACTGAGA TTCCTCTGCA TCTGATATAT CCCTCTGTTG ATAATGTAAG AACTAGCTTA 
    GAAGGATACC CTGCTGGTGG CTCATTGCCT TATAGCATTC AGACTGCTCA AAAACAGCCG 
    TGGCTGCATT CCTATTTCCA TAAGTGGAAA GCAGAAACCT CGAGACGTAG CCAAGCAATG 
    CCCCACATCA AAACATACAT GAGGTTATCT CCAGATTCCC AGCACCTGGC ATGGTTTTTA 
    GTTACTAGTG CTAATCTATC AAAAGCTGCC TGGGGTTCAC TGGAGAAAAA TGGTGCCCAG 
    CTGTTTATCC GCTCTTATGA ACTGGGGGTT CTGTTCTTGC CTTCTGCATT CGAAACAAAT 
    ACATTCAATG TGAAACTGAA TATTTACGCC AGCAATGAAC CTTCTAGTAA TGCCTTTCCG 
    GTGCCCTATG ACTTACCCCC AGAACATTAT GGTGCCAAAG ACAGGCCCTG GGTTTGGAAT 
    ATCCCTTATG TGAATGCTCC TGACACACAT GGGAATATTT GGTGTCCTCC TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001039242.1
    CDS28..1821
    Translation

    Target ORF information:

    RefSeq Version NM_001045777.1
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis tyrosyl-DNA phosphodiesterase 1 (tdp1), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001045777.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGACAGGA CCTCAGCTTC CCAACAGAGT AATTATGGTA AATGGACCTT ATCTAGCAGT 
    GAGGATGAAA CAGAGGACAG TGGAATACCA TCTCCTCCAT CAAGTAGTAG AGAGAGTCGG 
    GATTCTGTTC CTCATTACCC CTGCTCCGAT GCCAGAAAAG CATCTCACAA AAGAAAGGCG 
    AATCCAGTTA AATTTAAAGA GATGTCTAAA AAGGAATTGA TTCCTGCCAA GAAAATAAAA 
    ACTGAGACTG AAGTTTCAGG ATGGTGCTTA TCGAGTAGTG ATGAAGAATC GAAACCTACC 
    CAAGTTGAAC AAAAAGGGAA CATTAAAGCA GACAAAATAG AGGTGCTAGT GCAAAGCAAA 
    AAAATACAAG AAAACATAGA GGTGAAGCAA AAAAAATGCA AGACACCAAG TGATTCTCAA 
    GACACATGGG ACCTGCTCCA GGCTGGTGAG CCTTTCCGCT TCTACCTTAC TAAAGTTATG 
    GGGATCAAAC CTAAATACAA CTCAGGTGCA CTTCACATAA AAGATATTTT ATCTCCTCTT 
    TTTGGGACAC TTGTATCTTC AGCACAGTTC AACTATTGCT TTGATATTAA GTGGCTAGTG 
    AAACAATATC CTGAAGAATT TAGAGACAAG CCACTGCTTA TTGTTCATGG TGAGAAGAGA 
    GAATCAAAAG CTAAACTACA TGAGGATGCT CACCCTTACG AACACATCCG TCTGTGTCAG 
    GCCAAGTTGG ATATCGCCTT TGGGACCCAC CACACGAAAA TGATGTTGCT GTTGTACACA 
    GAGGGTCTTA GAGTTGTAAT CCATACCAGT AACCTTATCC ATGAAGATTG GTACCAGAAA 
    ACACAAGGTA TTTGGTTAAG CCCATTGTAT CCTCGGCTTC CTGAAGGAGC TTCGGTTTCT 
    GCAGGTGAAT CTTCTACAAA TTTTCGATCT GACCTTGTAG CATATTTAGC CTCTTACAAT 
    TCTCCGAGCC TAAGAGAGTG GATGGATATC ATTAAGCAGC ATGATCTCTC AGAAACAAGG 
    GTATACCTAA TTGGATCAAC ACCAGGAAGA TTTCAAGGAA ATGACAAAGA TAAATGGGGA 
    CATTTCCGTT TGAGAAAGCT ATTAAGAGAA AACACATCTG CAGCACCAGG GCAGGAAACA 
    TGGCCAGTGA TTGGACAGTT TTCAAGCATA GGATCCATGG GTGTGGACAA AACCAAGTGG 
    CTATGCTCAG AATTCACTGA AAGTCTGACA ACCCTGGGAA AAAGCATCAA AAGTCTACAG 
    AAAACTGAGA TTCCTCTGCA TCTGATATAT CCCTCTGTTG ATAATGTAAG AACTAGCTTA 
    GAAGGATACC CTGCTGGTGG CTCATTGCCT TATAGCATTC AGACTGCTCA AAAACAGCCG 
    TGGCTGCATT CCTATTTCCA TAAGTGGAAA GCAGAAACCT CGAGACGTAG CCAAGCAATG 
    CCCCACATCA AAACATACAT GAGGTTATCT CCAGATTCCC AGCACCTGGC ATGGTTTTTA 
    GTTACTAGTG CTAATCTATC AAAAGCTGCC TGGGGTTCAC TGGAGAAAAA TGGTGCCCAG 
    CTGTTTATCC GCTCTTATGA ACTGGGGGTT CTGTTCTTGC CTTCTGCATT CGAAACAAAT 
    ACATTCAATG TGAAACTGAA TATTTACGCC AGCAATGAAC CTTCTAGTAA TGCCTTTCCG 
    GTGCCCTATG ACTTACCCCC AGAACATTAT GGTGCCAAAG ACAGGCCCTG GGTTTGGAAT 
    ATCCCTTATG TGAATGCTCC TGACACACAT GGGAATATTT GGTGTCCTCC TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    tdp1 ( XM_031890524.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_031746384.1 Xenopus tropicalis tyrosyl-DNA phosphodiesterase 1 (tdp1), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OXa63750
    Clone ID Related Accession (Same CDS sequence) XM_031890524.1
    Accession Version XM_031890524.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1686bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-17
    Organism Xenopus tropicalis(tropical clawed frog)
    Product tyrosyl-DNA phosphodiesterase 1 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGACAGGA CCTCAGCTTC CCAACAGAGT AATTATGGTA AATGGACCTT ATCTAGCAGT 
    GAGGATGAAA CAGAGGACAG TGGAATACCA TCTCCTCCAT CAAGTAGTAG AGAGAGTCGG 
    GATTCTGTTC CTCATTACCC CTGCTCCGAT GCCAGAAAAG CATCTCACAA AAGAAAGGCG 
    AATCCAGTTA AATTTAAAGA GATGTCTAAA AAGGAATTGA TTCCTGCCAA GAAAATAAAA 
    ACTGAGACTG AAGTTTCAGG ATGGTGCTTA TCGAGTAGTG ATGAAGAATC GAAACCTACC 
    CAAGTTGAAC AAAAAGGGAA CATTAAAGCA GACAAAATAG AGGTGCTAGT GCAAAGCAAA 
    AAAATACAAG AAAACATAGA GGTGAAGCAA AAAAAATGCA AGACACCAAG TGATTCTCAA 
    GACACATGGG ACCTGCTCCA GGCTGGTGAG CCTTTCCGCT TCTACCTTAC TAAAGTTATG 
    GGGATCAAAC CTAAATACAA CTCAGGTGCA CTTCACATAA AAGATATTTT ATCTCCTCTT 
    TTTGGGACAC TTGTATCTTC AGCACAGTTC AACTATTGCT TTGATATTAA GTGGCTAGTG 
    AAACAATATC CTGAAGAATT TAGAGACAAG CCACTGCTTA TTGTTCATGG TGAGAAGAGA 
    GAATCAAAAG CTAAACTACA TGAGGATGCT CACCCTTACG AACACATCCG TCTGTGTCAG 
    GCCAAGTTGG ATATCGCCTT TGGGACCCAC CACACGAAAA TGATGTTGCT GTTGTACACA 
    GAGGGTCTTA GAGTTGTAAT CCATACCAGT AACCTTATCC ATGAAGATTG GTACCAGAAA 
    ACACAAGGTA TTTGGTTAAG CCCATTGTAT CCTCGGCTTC CTGAAGGAGC TTCGGTTTCT 
    GCAGGTGAAT CTTCTACAAA TTTTCGATCT GACCTTGTAG CATATTTAGC CTCTTACAAT 
    TCTCCGAGCC TAAGAGAGTG GATGGATATC ATTAAGCAGC ATGATCTCTC AGAAACAAGG 
    GTATACCTAA TTGGATCAAC ACCAGGAAGA TTTCAAGGAA ATGACAAAGA TAAATGGGGA 
    CATTTCCGTT TGAGAAAGCT ATTAAGAGAA AACACATCTG CAGCACCAGG GCAGGAAACA 
    TGGCCAGTGA TTGGACAGTT TTCAAGCATA GGATCCATGG GTGTGGACAA AACCAAGTGG 
    CTATGCTCAG AATTCACTGA AAGTCTGACA ACCCTGGGAA AAAGCATCAA AAGTCTACAG 
    AAACCTGAGA TTCCTCTGCA TCTGATATAT CCCTCTGTTG ATAATGTAAG AACTAGCTTA 
    GAAGGATACC CTGCTGGTGG CTCATTGCCT TATAGCATTC AGACTGCTCA AAAACAGCCG 
    TGGCTGCATT CCTATTTCCA TGCTAATCTA TCAAAAGCTG CCTGGGGTTC ACTGGAGAAA 
    AATGGTGCCC AGCTGTTTAT CCGCTCTTAT GAACTGGGGG TTCTGTTCTT GCCTTCTGCA 
    TTCGAAACAA ATACATTCAA TGTGAAACTG AATATTTACG CCAGCAATGA ACCTTCTAGT 
    AATGCCTTTC CGGTGCCCTA TGACTTACCC CCAGAACATT ATGGTGCCAA AGACAGGCCC 
    TGGGTTTGGA ATATCCCTTA TGTGAATGCT CCTGACACAC ATGGGAATAT TTGGTGTCCT 
    CCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_031746384.1
    CDS190..1875
    Translation

    Target ORF information:

    RefSeq Version XM_031890524.1
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis tyrosyl-DNA phosphodiesterase 1 (tdp1), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_031890524.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGACAGGA CCTCAGCTTC CCAACAGAGT AATTATGGTA AATGGACCTT ATCTAGCAGT 
    GAGGATGAAA CAGAGGACAG TGGAATACCA TCTCCTCCAT CAAGTAGTAG AGAGAGTCGG 
    GATTCTGTTC CTCATTACCC CTGCTCCGAT GCCAGAAAAG CATCTCACAA AAGAAAGGCG 
    AATCCAGTTA AATTTAAAGA GATGTCTAAA AAGGAATTGA TTCCTGCCAA GAAAATAAAA 
    ACTGAGACTG AAGTTTCAGG ATGGTGCTTA TCGAGTAGTG ATGAAGAATC GAAACCTACC 
    CAAGTTGAAC AAAAAGGGAA CATTAAAGCA GACAAAATAG AGGTGCTAGT GCAAAGCAAA 
    AAAATACAAG AAAACATAGA GGTGAAGCAA AAAAAATGCA AGACACCAAG TGATTCTCAA 
    GACACATGGG ACCTGCTCCA GGCTGGTGAG CCTTTCCGCT TCTACCTTAC TAAAGTTATG 
    GGGATCAAAC CTAAATACAA CTCAGGTGCA CTTCACATAA AAGATATTTT ATCTCCTCTT 
    TTTGGGACAC TTGTATCTTC AGCACAGTTC AACTATTGCT TTGATATTAA GTGGCTAGTG 
    AAACAATATC CTGAAGAATT TAGAGACAAG CCACTGCTTA TTGTTCATGG TGAGAAGAGA 
    GAATCAAAAG CTAAACTACA TGAGGATGCT CACCCTTACG AACACATCCG TCTGTGTCAG 
    GCCAAGTTGG ATATCGCCTT TGGGACCCAC CACACGAAAA TGATGTTGCT GTTGTACACA 
    GAGGGTCTTA GAGTTGTAAT CCATACCAGT AACCTTATCC ATGAAGATTG GTACCAGAAA 
    ACACAAGGTA TTTGGTTAAG CCCATTGTAT CCTCGGCTTC CTGAAGGAGC TTCGGTTTCT 
    GCAGGTGAAT CTTCTACAAA TTTTCGATCT GACCTTGTAG CATATTTAGC CTCTTACAAT 
    TCTCCGAGCC TAAGAGAGTG GATGGATATC ATTAAGCAGC ATGATCTCTC AGAAACAAGG 
    GTATACCTAA TTGGATCAAC ACCAGGAAGA TTTCAAGGAA ATGACAAAGA TAAATGGGGA 
    CATTTCCGTT TGAGAAAGCT ATTAAGAGAA AACACATCTG CAGCACCAGG GCAGGAAACA 
    TGGCCAGTGA TTGGACAGTT TTCAAGCATA GGATCCATGG GTGTGGACAA AACCAAGTGG 
    CTATGCTCAG AATTCACTGA AAGTCTGACA ACCCTGGGAA AAAGCATCAA AAGTCTACAG 
    AAACCTGAGA TTCCTCTGCA TCTGATATAT CCCTCTGTTG ATAATGTAAG AACTAGCTTA 
    GAAGGATACC CTGCTGGTGG CTCATTGCCT TATAGCATTC AGACTGCTCA AAAACAGCCG 
    TGGCTGCATT CCTATTTCCA TGCTAATCTA TCAAAAGCTG CCTGGGGTTC ACTGGAGAAA 
    AATGGTGCCC AGCTGTTTAT CCGCTCTTAT GAACTGGGGG TTCTGTTCTT GCCTTCTGCA 
    TTCGAAACAA ATACATTCAA TGTGAAACTG AATATTTACG CCAGCAATGA ACCTTCTAGT 
    AATGCCTTTC CGGTGCCCTA TGACTTACCC CCAGAACATT ATGGTGCCAA AGACAGGCCC 
    TGGGTTTGGA ATATCCCTTA TGTGAATGCT CCTGACACAC ATGGGAATAT TTGGTGTCCT 
    CCTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    tdp1 ( XM_031890526.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_031746386.1 Xenopus tropicalis tyrosyl-DNA phosphodiesterase 1 (tdp1), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OXa63751
    Clone ID Related Accession (Same CDS sequence) XM_031890526.1
    Accession Version XM_031890526.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1593bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-17
    Organism Xenopus tropicalis(tropical clawed frog)
    Product tyrosyl-DNA phosphodiesterase 1 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCTAAAA AGGAATTGAT TCCTGCCAAG AAAATAAAAA CTGAGACTGA AGTTTCAGGA 
    TGGTGCTTAT CGAGTAGTGA TGAAGAATCG AAACCTACCC AAGTTGAACA AAAAGGGAAC 
    ATTAAAGCAG ACAAAATAGA GGTGCTAGTG CAAAGCAAAA AAATACAAGA AAACATAGAG 
    GTGAAGCAAA AAAAATGCAA GACACCAAGT GATTCTCAAG ACACATGGGA CCTGCTCCAG 
    GCTGGTGAGC CTTTCCGCTT CTACCTTACT AAAGTTATGG GGATCAAACC TAAATACAAC 
    TCAGGTGCAC TTCACATAAA AGATATTTTA TCTCCTCTTT TTGGGACACT TGTATCTTCA 
    GCACAGTTCA ACTATTGCTT TGATATTAAG TGGCTAGTGA AACAATATCC TGAAGAATTT 
    AGAGACAAGC CACTGCTTAT TGTTCATGGT GAGAAGAGAG AATCAAAAGC TAAACTACAT 
    GAGGATGCTC ACCCTTACGA ACACATCCGT CTGTGTCAGG CCAAGTTGGA TATCGCCTTT 
    GGGACCCACC ACACGAAAAT GATGTTGCTG TTGTACACAG AGGGTCTTAG AGTTGTAATC 
    CATACCAGTA ACCTTATCCA TGAAGATTGG TACCAGAAAA CACAAGGTAT TTGGTTAAGC 
    CCATTGTATC CTCGGCTTCC TGAAGGAGCT TCGGTTTCTG CAGGTGAATC TTCTACAAAT 
    TTTCGATCTG ACCTTGTAGC ATATTTAGCC TCTTACAATT CTCCGAGCCT AAGAGAGTGG 
    ATGGATATCA TTAAGCAGCA TGATCTCTCA GAAACAAGGG TATACCTAAT TGGATCAACA 
    CCAGGAAGAT TTCAAGGAAA TGACAAAGAT AAATGGGGAC ATTTCCGTTT GAGAAAGCTA 
    TTAAGAGAAA ACACATCTGC AGCACCAGGG CAGGAAACAT GGCCAGTGAT TGGACAGTTT 
    TCAAGCATAG GATCCATGGG TGTGGACAAA ACCAAGTGGC TATGCTCAGA ATTCACTGAA 
    AGTCTGACAA CCCTGGGAAA AAGCATCAAA AGTCTACAGA AACCTGAGAT TCCTCTGCAT 
    CTGATATATC CCTCTGTTGA TAATGTAAGA ACTAGCTTAG AAGGATACCC TGCTGGTGGC 
    TCATTGCCTT ATAGCATTCA GACTGCTCAA AAACAGCCGT GGCTGCATTC CTATTTCCAT 
    AAGTGGAAAG CAGAAACCTC GAGACGTAGC CAAGCAATGC CCCACATCAA AACATACATG 
    AGGTTATCTC CAGATTCCCA GCACCTGGCA TGGTTTTTAG TTACTAGTGC TAATCTATCA 
    AAAGCTGCCT GGGGTTCACT GGAGAAAAAT GGTGCCCAGC TGTTTATCCG CTCTTATGAA 
    CTGGGGGTTC TGTTCTTGCC TTCTGCATTC GAAACAAATA CATTCAATGT GAAACTGAAT 
    ATTTACGCCA GCAATGAACC TTCTAGTAAT GCCTTTCCGG TGCCCTATGA CTTACCCCCA 
    GAACATTATG GTGCCAAAGA CAGGCCCTGG GTTTGGAATA TCCCTTATGT GAATGCTCCT 
    GACACACATG GGAATATTTG GTGTCCTCCT TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_031746386.1
    CDS329..1921
    Translation

    Target ORF information:

    RefSeq Version XM_031890526.1
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis tyrosyl-DNA phosphodiesterase 1 (tdp1), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_031890526.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCTAAAA AGGAATTGAT TCCTGCCAAG AAAATAAAAA CTGAGACTGA AGTTTCAGGA 
    TGGTGCTTAT CGAGTAGTGA TGAAGAATCG AAACCTACCC AAGTTGAACA AAAAGGGAAC 
    ATTAAAGCAG ACAAAATAGA GGTGCTAGTG CAAAGCAAAA AAATACAAGA AAACATAGAG 
    GTGAAGCAAA AAAAATGCAA GACACCAAGT GATTCTCAAG ACACATGGGA CCTGCTCCAG 
    GCTGGTGAGC CTTTCCGCTT CTACCTTACT AAAGTTATGG GGATCAAACC TAAATACAAC 
    TCAGGTGCAC TTCACATAAA AGATATTTTA TCTCCTCTTT TTGGGACACT TGTATCTTCA 
    GCACAGTTCA ACTATTGCTT TGATATTAAG TGGCTAGTGA AACAATATCC TGAAGAATTT 
    AGAGACAAGC CACTGCTTAT TGTTCATGGT GAGAAGAGAG AATCAAAAGC TAAACTACAT 
    GAGGATGCTC ACCCTTACGA ACACATCCGT CTGTGTCAGG CCAAGTTGGA TATCGCCTTT 
    GGGACCCACC ACACGAAAAT GATGTTGCTG TTGTACACAG AGGGTCTTAG AGTTGTAATC 
    CATACCAGTA ACCTTATCCA TGAAGATTGG TACCAGAAAA CACAAGGTAT TTGGTTAAGC 
    CCATTGTATC CTCGGCTTCC TGAAGGAGCT TCGGTTTCTG CAGGTGAATC TTCTACAAAT 
    TTTCGATCTG ACCTTGTAGC ATATTTAGCC TCTTACAATT CTCCGAGCCT AAGAGAGTGG 
    ATGGATATCA TTAAGCAGCA TGATCTCTCA GAAACAAGGG TATACCTAAT TGGATCAACA 
    CCAGGAAGAT TTCAAGGAAA TGACAAAGAT AAATGGGGAC ATTTCCGTTT GAGAAAGCTA 
    TTAAGAGAAA ACACATCTGC AGCACCAGGG CAGGAAACAT GGCCAGTGAT TGGACAGTTT 
    TCAAGCATAG GATCCATGGG TGTGGACAAA ACCAAGTGGC TATGCTCAGA ATTCACTGAA 
    AGTCTGACAA CCCTGGGAAA AAGCATCAAA AGTCTACAGA AACCTGAGAT TCCTCTGCAT 
    CTGATATATC CCTCTGTTGA TAATGTAAGA ACTAGCTTAG AAGGATACCC TGCTGGTGGC 
    TCATTGCCTT ATAGCATTCA GACTGCTCAA AAACAGCCGT GGCTGCATTC CTATTTCCAT 
    AAGTGGAAAG CAGAAACCTC GAGACGTAGC CAAGCAATGC CCCACATCAA AACATACATG 
    AGGTTATCTC CAGATTCCCA GCACCTGGCA TGGTTTTTAG TTACTAGTGC TAATCTATCA 
    AAAGCTGCCT GGGGTTCACT GGAGAAAAAT GGTGCCCAGC TGTTTATCCG CTCTTATGAA 
    CTGGGGGTTC TGTTCTTGCC TTCTGCATTC GAAACAAATA CATTCAATGT GAAACTGAAT 
    ATTTACGCCA GCAATGAACC TTCTAGTAAT GCCTTTCCGG TGCCCTATGA CTTACCCCCA 
    GAACATTATG GTGCCAAAGA CAGGCCCTGG GTTTGGAATA TCCCTTATGT GAATGCTCCT 
    GACACACATG GGAATATTTG GTGTCCTCCT TAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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