rtf1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene
Clones
gRNAs

Summary

Gene Symbol	rtf1
Entrez Gene ID	448631
Full Name	RTF1 homolog, Paf1/RNA polymerase II complex component
General protein information	Preferred Names RTF1 homolog, Paf1/RNA polymerase II complex component Names RNA polymerase-associated protein RTF1 homolog Rtf1, Paf1/RNA polymerase II complex component, homolog
Gene Type	protein-coding
Organism	Xenopus tropicalis(tropical clawed frog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_012968253.3	XP_012823707.1	RNA polymerase-associated protein RTF1 homolog isoform X1
NM_001005068.1	NP_001005068.1	RNA polymerase-associated protein RTF1 homolog
XM_012968253.2	XP_012823707.1	RNA polymerase-associated protein RTF1 homolog isoform X1

Pathways from BioSystems

Homologies

Bos taurus (cattle)	RTF1	NP_001179414.1
Mus musculus (house mouse)	Rtf1	NP_084388.2
Drosophila melanogaster (fruit fly)	Rtf1	NP_611665.1
	RTF1	XP_001100507.1
Gallus gallus (chicken)	RTF1	XP_421139.3
Pan troglodytes (chimpanzee)	RTF1	XP_001142072.1
Canis lupus familiaris (dog)	RTF1	XP_544630.2
Danio rerio (zebrafish)	rtf1	NP_001077046.1
Xenopus tropicalis (tropical clawed frog)	rtf1	NP_001005068.1
Homo sapiens (human)	RTF1	NP_055953.3

Gene Ontology
Bibliography

Related articles in PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following rtf1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rtf1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OXa20777	NM_001005068.1 Latest version!	Xenopus tropicalis RTF1 homolog, Paf1/RNA polymerase II complex component (rtf1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00
OXa26732	XM_012968253.2 Latest version!	Xenopus tropicalis RTF1 homolog, Paf1/RNA polymerase II complex component (rtf1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	10-12	$426.30 $609.00
OXa63624	XM_012968253.3 Latest version!	Xenopus tropicalis RTF1 homolog, Paf1/RNA polymerase II complex component (rtf1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

rtf1 ( NM_001005068.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> NP_001005068.1 Xenopus tropicalis RTF1 homolog, Paf1/RNA polymerase II complex component (rtf1), mRNA.

Price & Availability↑

CloneID	OXa20777
Clone ID Related Accession (Same CDS sequence)	NM_001005068.1
Accession Version	NM_001005068.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1773bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-21
Organism	Xenopus tropicalis(tropical clawed frog)
Product	RNA polymerase-associated protein RTF1 homolog
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076973.1. ##Evidence-Data-START## Transcript exon combination :: BC076973.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END##

ATGAAGAAAC AGGCCAACCG GGCAGCATCT TCTGCCAGCT CTGGCAAGGA CAGCTCTGAG 
GAGAGCTCTG CTCCAGAAGA AGGCGAGGTG TCGGATTCTG ATAGTAACAG CTCCTCCTCC 
AGTTCTGATT CAGATTCTTC ATCTGAAGAT GAAGAGTTCT GCGATGGCTA TGGGGAGGAC 
TTCATGGGGG ATGAAGAAGA TCGGGCTCGA CTTGAGCAGA TGACTGAGAA AGAGAGGGAA 
CAAGAACTGT TTAATCGGAT AGAAAAGCGG GAAGTGCTCA AACGAAGATT TGAAATAAAG 
AAGAAGCTAA AAACAGCAAA AAGGAAAGAA AAGAAAGAAA AAGAGAAAAA GAAGAAGCAT 
GATGAAGAAC AGGAGAAAAA GAAGCAAACA CAGGTCTTGG AGGCACAGTT ACAGGTAACT 
TCACATAATA AAGAAAGGAG GTCAAAGCGG GATGAAAAGT TGGATAAGAA ATCTCAAGCA 
ATGGAAGAAT TGCGAGCAGA GAGAGAGAAA AGGAAGAATA AGACTGCAGA GTTGATTGCC 
AGAAAACAGC CTCTGAAGAC CAGCGAGGTA TATTCTGACG ATGAAGAGGA AGAAGAGGAT 
GATAAGTCTA GTGAAAAAAG CAACCGATCT TCTAGATCAT CTTCTTCATC TGATGAAGAC 
GAAGAGACTG TTGAGATTCC ACCAAAATCT CTGCCTGTAT CTTTGCCAGA AGAGCTCAAC 
AAGGTTCGGT TGTCTCGACA CAAATTGGAA CGTTGGTGTC ATATGCCCTT TTTTGCCAAG 
ACTGTCTCAG GCTGTTTTGT GCGGATAGGC ATTGGAAACC ATAACAGCAA ACCTGTATAC 
AGAGTTGCAG AAATCACTGG TGTGGTGGAG ACTGGAAAAG TATACCAGTT GGGCGGGACA 
AGGACAAATA AAGGCCTGCA GTTACGGCAT GGCAACGACC AGAGGGTGTT CCGACTGGAG 
TTCGTCTCTA ACCAAGAGTT TACAGAAAGC GAGTTCATGA AATGGAAAGA GGCGATGTTT 
TCTGCTGGAA TGCAGCTTCC CACTCTCGAT GAAATCAACA AGAAGGAACT ATCAATTAAA 
GAAGCCATGA ATTATAAATT TAATGACCAG GATATTGAGG AGATTGTAAA GGAAAAGGAA 
CGGTTTAGAA AAGCTCCTCC GAATTATGCC ATGAAGAAAA CTCAGCTTAT GAAGGATAAG 
GCAATGGCGG AGGAAGCTGG AGATCAAGAC AGAGCTAAGC AGATTCAAGA TGAGTTGAAT 
GAACTTGAGG AGCGGGCTGA AGCTTTGGAT CGGCAGCGGA CAAAAAACAT CTCTGCCATA 
AGTTATATCA ACCAGCGAAA CAGAGAATGG AATATTGTGG AGTCTGAGAA GGCTTTAGTG 
GCAGAGAGTC AGAGCATGAA GCAGCAGCAG ATGGATCCCT TCACTAGGAG GCAATGCAAG 
CCAACCATGG TGTCTAATTC CAGGGATCCT GCAGTTCAGG CAGCCATTAT TGCTCAGCTA 
AATGCAAAGT ATGGTTCCGG AGCTAGCAAC GATGCATCTA AAGACACAGG CTCGGCTCAA 
AGCAAGGATA AAGATGGAAA CACCAAGTCA GCCAGTGACC TCTCGGAAGA CCTGTTTAAA 
GTGCATGATT TTGATGTCAA GATCGACCTC CAAGTCCCTA GTTCAGAATC AAAATCTCTC 
GCCATCTCCT CAAAAGCACC ACCAGCAAAG GACGGAGCAC CCCGCCGATC TCTGAATCTG 
GAGGACTACA AAAAAAGGAG AGGACTTATC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001005068.1
CDS	311..2083
Translation	MKKQANRAASSASSGKDSSEESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFCDGYGEDFMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKRKEKKEKEKKKKHDEEQEKKKQTQVLEAQLQVTSHNKERRSKRDEKLDKKSQAMEELRAEREKRKNKTAELIARKQPLKTSEVYSDDEEEEEDDKSSEKSNRSSRSSSSSDEDEETVEIPPKSLPVSLPEELNKVRLSRHKLERWCHMPFFAKTVSGCFVRIGIGNHNSKPVYRVAEITGVVETGKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKEAMNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLMKDKAMAEEAGDQDRAKQIQDELNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESQSMKQQQMDPFTRRQCKPTMVSNSRDPAVQAAIIAQLNAKYGSGASNDASKDTGSAQSKDKDGNTKSASDLSEDLFKVHDFDVKIDLQVPSSESKSLAISSKAPPAKDGAPRRSLNLEDYKKRRGLI

Target ORF information:

RefSeq Version	NM_001005068.1
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis RTF1 homolog, Paf1/RNA polymerase II complex component (rtf1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001005068.1

ORF Insert Sequence:

ATGAAGAAAC AGGCCAACCG GGCAGCATCT TCTGCCAGCT CTGGCAAGGA CAGCTCTGAG 
GAGAGCTCTG CTCCAGAAGA AGGCGAGGTG TCGGATTCTG ATAGTAACAG CTCCTCCTCC 
AGTTCTGATT CAGATTCTTC ATCTGAAGAT GAAGAGTTCT GCGATGGCTA TGGGGAGGAC 
TTCATGGGGG ATGAAGAAGA TCGGGCTCGA CTTGAGCAGA TGACTGAGAA AGAGAGGGAA 
CAAGAACTGT TTAATCGGAT AGAAAAGCGG GAAGTGCTCA AACGAAGATT TGAAATAAAG 
AAGAAGCTAA AAACAGCAAA AAGGAAAGAA AAGAAAGAAA AAGAGAAAAA GAAGAAGCAT 
GATGAAGAAC AGGAGAAAAA GAAGCAAACA CAGGTCTTGG AGGCACAGTT ACAGGTAACT 
TCACATAATA AAGAAAGGAG GTCAAAGCGG GATGAAAAGT TGGATAAGAA ATCTCAAGCA 
ATGGAAGAAT TGCGAGCAGA GAGAGAGAAA AGGAAGAATA AGACTGCAGA GTTGATTGCC 
AGAAAACAGC CTCTGAAGAC CAGCGAGGTA TATTCTGACG ATGAAGAGGA AGAAGAGGAT 
GATAAGTCTA GTGAAAAAAG CAACCGATCT TCTAGATCAT CTTCTTCATC TGATGAAGAC 
GAAGAGACTG TTGAGATTCC ACCAAAATCT CTGCCTGTAT CTTTGCCAGA AGAGCTCAAC 
AAGGTTCGGT TGTCTCGACA CAAATTGGAA CGTTGGTGTC ATATGCCCTT TTTTGCCAAG 
ACTGTCTCAG GCTGTTTTGT GCGGATAGGC ATTGGAAACC ATAACAGCAA ACCTGTATAC 
AGAGTTGCAG AAATCACTGG TGTGGTGGAG ACTGGAAAAG TATACCAGTT GGGCGGGACA 
AGGACAAATA AAGGCCTGCA GTTACGGCAT GGCAACGACC AGAGGGTGTT CCGACTGGAG 
TTCGTCTCTA ACCAAGAGTT TACAGAAAGC GAGTTCATGA AATGGAAAGA GGCGATGTTT 
TCTGCTGGAA TGCAGCTTCC CACTCTCGAT GAAATCAACA AGAAGGAACT ATCAATTAAA 
GAAGCCATGA ATTATAAATT TAATGACCAG GATATTGAGG AGATTGTAAA GGAAAAGGAA 
CGGTTTAGAA AAGCTCCTCC GAATTATGCC ATGAAGAAAA CTCAGCTTAT GAAGGATAAG 
GCAATGGCGG AGGAAGCTGG AGATCAAGAC AGAGCTAAGC AGATTCAAGA TGAGTTGAAT 
GAACTTGAGG AGCGGGCTGA AGCTTTGGAT CGGCAGCGGA CAAAAAACAT CTCTGCCATA 
AGTTATATCA ACCAGCGAAA CAGAGAATGG AATATTGTGG AGTCTGAGAA GGCTTTAGTG 
GCAGAGAGTC AGAGCATGAA GCAGCAGCAG ATGGATCCCT TCACTAGGAG GCAATGCAAG 
CCAACCATGG TGTCTAATTC CAGGGATCCT GCAGTTCAGG CAGCCATTAT TGCTCAGCTA 
AATGCAAAGT ATGGTTCCGG AGCTAGCAAC GATGCATCTA AAGACACAGG CTCGGCTCAA 
AGCAAGGATA AAGATGGAAA CACCAAGTCA GCCAGTGACC TCTCGGAAGA CCTGTTTAAA 
GTGCATGATT TTGATGTCAA GATCGACCTC CAAGTCCCTA GTTCAGAATC AAAATCTCTC 
GCCATCTCCT CAAAAGCACC ACCAGCAAAG GACGGAGCAC CCCGCCGATC TCTGAATCTG 
GAGGACTACA AAAAAAGGAG AGGACTTATC TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rtf1 ( XM_012968253.2 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012823707.1 Xenopus tropicalis RTF1 homolog, Paf1/RNA polymerase II complex component (rtf1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OXa26732
Clone ID Related Accession (Same CDS sequence)	XM_012968253.2
Accession Version	XM_012968253.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2034bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-07
Organism	Xenopus tropicalis(tropical clawed frog)
Product	RNA polymerase-associated protein RTF1 homolog isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012968253.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGTGAAGA AACGGAAAGG CCGGGTGGTC ATAGACTCCG ATACCGAGGA TAGCGGTAGC 
GACGAGAATT TGGATCAGGA GCTGCTGTCT TTGGCCAAGC GCAAGAGGAG TGATTCAGAA 
GAGAAGGAAC AGCCAATAAG CAAGCCGGCA GCAACCTCAG ACTCGGAGAC CTCTGATAGT 
GATGATGAGT GGACAGTCAC AGGACAGTCA AAAAACAAGA AAAAAGGGAA ACCGGGGAAA 
GGAGGGGAGA AGAAGGCAGC TATGAAGAAA CAGGCCAACC GGGCAGCATC TTCTGCCAGC 
TCTGGCAAGG ACAGCTCTGA GGAGAGCTCT GCTCCAGAAG AAGGCGAGGT GTCTGATTCT 
GATAGTAACA GCTCCTCCTC CAGTTCTGAT TCAGATTCTT CATCTGAAGA TGAAGAGTTC 
TGCGATGGCT ATGGGGAGGA CTTTATGGGG GATGAAGAAG ATCGGGCTCG ACTTGAGCAG 
ATGACTGAGA AAGAGAGGGA ACAAGAACTG TTTAATCGGA TAGAAAAGCG GGAAGTGCTC 
AAACGAAGAT TTGAAATAAA GAAGAAGCTA AAAACAGCAA AAAGGAAAGA AAAGAAAGAA 
AAAGAGAAAA AGAAGAAGCA TGATGAAGAA CAGGAGAAAA AGAAGCAAAC ACAGGTCTTG 
GAGGCACAGT TACAGGTAAC TTCACATAAT AAAGAAAGGA GGTCAAAGCG GGATGAAAAA 
TTGGATAAGA AATCTCAAGC AATGGAAGAA TTGCGAGCAG AGAGAGAGAA AAGGAAGAAT 
AAGACTGCAG AGTTGATTGC CAGAAAACAG CCTCTGAAGA CCAGCGAGGT ATATTCTGAC 
GATGAAGAGG AAGAAGAGGA TGATAAGTCT AGTGAAAAAA GCAACCGATC TTCTAGATCA 
TCTTCTTCAT CTGATGAAGA CGAAGAGACT GTTGAGATTC CACCAAAATC TCTGCCTGTA 
TCTTTGCCAG AAGAGCTCAA CAAGGTTCGG TTGTCTCGAC ACAAATTGGA ACGTTGGTGT 
CATATGCCCT TTTTTGCCAA GACTGTCTCA GGCTGTTTTG TGCGGATAGG CATTGGAAAC 
CATAACAGCA AACCTGTATA CAGAGTTGCA GAAATCACTG GTGTGGTGGA GACAGGAAAA 
GTATACCAGT TGGGCGGGAC AAGGACAAAT AAAGGCCTGC AGTTACGGCA CGGCAACGAC 
CAGAGGGTGT TCCGACTGGA GTTCGTCTCT AACCAAGAGT TTACAGAAAG CGAGTTCATG 
AAATGGAAAG AGGCGATGTT TTCTGCTGGA ATGCAGCTTC CCACTCTCGA TGAAATCAAC 
AAGAAGGAAC TATCAATTAA AGAAGCCATG AATTATAAAT TTAATGACCA GGATATTGAG 
GAGATTGTAA AGGAAAAGGA ACGGTTTAGA AAAGCTCCTC CGAATTATGC CATGAAGAAA 
ACTCAGCTTA TGAAGGATAA GGCAATGGCG GAGGAAGCTG GAGATCAAGA CAGAGCTAAG 
CAGATTCAAG ATGAGTTGAA TGAACTTGAG GAGCGGGCTG AAGCTTTGGA TCGGCAGCGG 
ACAAAAAACA TCTCTGCCAT AAGTTATATC AACCAGCGAA ACAGAGAATG GAATATTGTG 
GAGTCTGAGA AGGCTTTAGT GGCAGAGAGT CAGAGCATGA AGCAGCAGCA GATGGATCCC 
TTCACTAGGA GGCAATGCAA GCCAACCATG GTGTCTAATT CCAGGGATCC TGCAGTTCAG 
GCAGCCATTA TTGCTCAGCT AAATGCAAAG TATGGTTCCG GAGCTAGCAA CGATGCATCT 
AAAGACACAG GCTCGGCTCA AAGCAAGGAT AAAGATGGAA ACACCAAGTC AGCCAGTGAC 
CTCTCGGAAG ACCTGTTTAA AGTGCATGAT TTTGATGTCA AGATCGACCT CCAAGTCCCT 
AGTTCAGAAT CAAAATCTCT TGCCATCTCC TCAAAAGCAC CACCAGCAAA GGACGGAGCA 
CCCCGCCGAT CTCTGAATCT GGAGGACTAC AAAAAAAGGA GAGGACTTAT CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012823707.1
CDS	130..2163
Translation	MVKKRKGRVVIDSDTEDSGSDENLDQELLSLAKRKRSDSEEKEQPISKPAATSDSETSDSDDEWTVTGQSKNKKKGKPGKGGEKKAAMKKQANRAASSASSGKDSSEESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFCDGYGEDFMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKRKEKKEKEKKKKHDEEQEKKKQTQVLEAQLQVTSHNKERRSKRDEKLDKKSQAMEELRAEREKRKNKTAELIARKQPLKTSEVYSDDEEEEEDDKSSEKSNRSSRSSSSSDEDEETVEIPPKSLPVSLPEELNKVRLSRHKLERWCHMPFFAKTVSGCFVRIGIGNHNSKPVYRVAEITGVVETGKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKEAMNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLMKDKAMAEEAGDQDRAKQIQDELNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESQSMKQQQMDPFTRRQCKPTMVSNSRDPAVQAAIIAQLNAKYGSGASNDASKDTGSAQSKDKDGNTKSASDLSEDLFKVHDFDVKIDLQVPSSESKSLAISSKAPPAKDGAPRRSLNLEDYKKRRGLI

Target ORF information:

RefSeq Version	XM_012968253.2
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis RTF1 homolog, Paf1/RNA polymerase II complex component (rtf1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012968253.2

ORF Insert Sequence:

ATGGTGAAGA AACGGAAAGG CCGGGTGGTC ATAGACTCCG ATACCGAGGA TAGCGGTAGC 
GACGAGAATT TGGATCAGGA GCTGCTGTCT TTGGCCAAGC GCAAGAGGAG TGATTCAGAA 
GAGAAGGAAC AGCCAATAAG CAAGCCGGCA GCAACCTCAG ACTCGGAGAC CTCTGATAGT 
GATGATGAGT GGACAGTCAC AGGACAGTCA AAAAACAAGA AAAAAGGGAA ACCGGGGAAA 
GGAGGGGAGA AGAAGGCAGC TATGAAGAAA CAGGCCAACC GGGCAGCATC TTCTGCCAGC 
TCTGGCAAGG ACAGCTCTGA GGAGAGCTCT GCTCCAGAAG AAGGCGAGGT GTCTGATTCT 
GATAGTAACA GCTCCTCCTC CAGTTCTGAT TCAGATTCTT CATCTGAAGA TGAAGAGTTC 
TGCGATGGCT ATGGGGAGGA CTTTATGGGG GATGAAGAAG ATCGGGCTCG ACTTGAGCAG 
ATGACTGAGA AAGAGAGGGA ACAAGAACTG TTTAATCGGA TAGAAAAGCG GGAAGTGCTC 
AAACGAAGAT TTGAAATAAA GAAGAAGCTA AAAACAGCAA AAAGGAAAGA AAAGAAAGAA 
AAAGAGAAAA AGAAGAAGCA TGATGAAGAA CAGGAGAAAA AGAAGCAAAC ACAGGTCTTG 
GAGGCACAGT TACAGGTAAC TTCACATAAT AAAGAAAGGA GGTCAAAGCG GGATGAAAAA 
TTGGATAAGA AATCTCAAGC AATGGAAGAA TTGCGAGCAG AGAGAGAGAA AAGGAAGAAT 
AAGACTGCAG AGTTGATTGC CAGAAAACAG CCTCTGAAGA CCAGCGAGGT ATATTCTGAC 
GATGAAGAGG AAGAAGAGGA TGATAAGTCT AGTGAAAAAA GCAACCGATC TTCTAGATCA 
TCTTCTTCAT CTGATGAAGA CGAAGAGACT GTTGAGATTC CACCAAAATC TCTGCCTGTA 
TCTTTGCCAG AAGAGCTCAA CAAGGTTCGG TTGTCTCGAC ACAAATTGGA ACGTTGGTGT 
CATATGCCCT TTTTTGCCAA GACTGTCTCA GGCTGTTTTG TGCGGATAGG CATTGGAAAC 
CATAACAGCA AACCTGTATA CAGAGTTGCA GAAATCACTG GTGTGGTGGA GACAGGAAAA 
GTATACCAGT TGGGCGGGAC AAGGACAAAT AAAGGCCTGC AGTTACGGCA CGGCAACGAC 
CAGAGGGTGT TCCGACTGGA GTTCGTCTCT AACCAAGAGT TTACAGAAAG CGAGTTCATG 
AAATGGAAAG AGGCGATGTT TTCTGCTGGA ATGCAGCTTC CCACTCTCGA TGAAATCAAC 
AAGAAGGAAC TATCAATTAA AGAAGCCATG AATTATAAAT TTAATGACCA GGATATTGAG 
GAGATTGTAA AGGAAAAGGA ACGGTTTAGA AAAGCTCCTC CGAATTATGC CATGAAGAAA 
ACTCAGCTTA TGAAGGATAA GGCAATGGCG GAGGAAGCTG GAGATCAAGA CAGAGCTAAG 
CAGATTCAAG ATGAGTTGAA TGAACTTGAG GAGCGGGCTG AAGCTTTGGA TCGGCAGCGG 
ACAAAAAACA TCTCTGCCAT AAGTTATATC AACCAGCGAA ACAGAGAATG GAATATTGTG 
GAGTCTGAGA AGGCTTTAGT GGCAGAGAGT CAGAGCATGA AGCAGCAGCA GATGGATCCC 
TTCACTAGGA GGCAATGCAA GCCAACCATG GTGTCTAATT CCAGGGATCC TGCAGTTCAG 
GCAGCCATTA TTGCTCAGCT AAATGCAAAG TATGGTTCCG GAGCTAGCAA CGATGCATCT 
AAAGACACAG GCTCGGCTCA AAGCAAGGAT AAAGATGGAA ACACCAAGTC AGCCAGTGAC 
CTCTCGGAAG ACCTGTTTAA AGTGCATGAT TTTGATGTCA AGATCGACCT CCAAGTCCCT 
AGTTCAGAAT CAAAATCTCT TGCCATCTCC TCAAAAGCAC CACCAGCAAA GGACGGAGCA 
CCCCGCCGAT CTCTGAATCT GGAGGACTAC AAAAAAAGGA GAGGACTTAT CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

rtf1 ( XM_012968253.3 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_012823707.1 Xenopus tropicalis RTF1 homolog, Paf1/RNA polymerase II complex component (rtf1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OXa63624
Clone ID Related Accession (Same CDS sequence)	XM_012968253.3
Accession Version	XM_012968253.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2034bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-17
Organism	Xenopus tropicalis(tropical clawed frog)
Product	RNA polymerase-associated protein RTF1 homolog isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030684.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012968253.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGTGAAGA AACGGAAAGG CCGGGTGGTC ATAGACTCCG ATACCGAGGA TAGCGGTAGC 
GACGAGAATT TGGATCAGGA GCTTCTGTCT TTGGCCAAGC GCAAGAGGAG TGATTCAGAA 
GAGAAGGAAC AGCCAATAAG CAAGCCGGCA GCAACCTCTG ACTCGGAGAC CTCTGATAGT 
GATGATGAGT GGACAGTCAC AGGACAGTCA AAAAACAAGA AAAAAGGGAA ACCGGGGAAA 
GGAGGGGAGA AGAAGGCAGC TATGAAGAAA CAGGCCAACC GGGCAGCATC TTCTGCCAGC 
TCTGGCAAGG ACAGCTCTGA GGAGAGCTCT GCTCCAGAAG AAGGCGAGGT GTCGGATTCT 
GATAGTAACA GCTCCTCCTC CAGTTCTGAT TCAGATTCTT CATCTGAAGA TGAAGAGTTC 
TGCGATGGCT ATGGGGAGGA CTTCATGGGG GATGAAGAAG ATCGGGCTCG ACTTGAGCAG 
ATGACTGAGA AAGAGAGGGA ACAAGAACTG TTTAATCGGA TAGAAAAGCG GGAAGTGCTC 
AAACGAAGAT TTGAAATAAA GAAGAAGCTA AAAACAGCAA AAAGGAAAGA AAAGAAAGAA 
AAAGAGAAAA AGAAGAAGCA TGATGAAGAA CAGGAGAAAA AGAAGCAAAC ACAGGTCTTG 
GAGGCACAGT TACAGGTAAC TTCACATAAT AAAGAAAGGA GGTCAAAGCG GGATGAAAAG 
TTGGATAAGA AATCTCAAGC AATGGAAGAA TTGCGAGCAG AGAGAGAGAA AAGGAAGAAT 
AAGACTGCAG AGTTGATTGC CAGAAAACAG CCTCTGAAGA CCAGCGAGGT ATATTCTGAC 
GATGAAGAGG AAGAAGAGGA TGATAAGTCT AGTGAAAAAA GCAACCGATC TTCTAGATCA 
TCTTCTTCAT CTGATGAAGA CGAAGAGACT GTTGAGATTC CACCAAAATC TCTGCCTGTA 
TCTTTGCCAG AAGAGCTCAA CAAGGTTCGG TTGTCTCGAC ACAAATTGGA ACGTTGGTGT 
CATATGCCCT TTTTTGCCAA GACTGTCTCA GGCTGTTTTG TGCGGATAGG CATTGGAAAC 
CATAACAGCA AACCTGTATA CAGAGTTGCA GAAATCACTG GTGTGGTGGA GACTGGAAAA 
GTATACCAGT TGGGCGGGAC AAGGACAAAT AAAGGCCTGC AGTTACGGCA TGGCAACGAC 
CAGAGGGTGT TCCGACTGGA GTTCGTCTCT AACCAAGAGT TTACAGAAAG CGAGTTCATG 
AAATGGAAAG AGGCGATGTT TTCTGCTGGA ATGCAGCTTC CCACTCTCGA TGAAATCAAC 
AAGAAGGAAC TATCAATTAA AGAAGCCATG AATTATAAAT TTAATGACCA GGATATTGAG 
GAGATTGTAA AGGAAAAGGA ACGGTTTAGA AAAGCTCCTC CGAATTATGC CATGAAGAAA 
ACTCAGCTTA TGAAGGATAA GGCAATGGCG GAGGAAGCTG GAGATCAAGA CAGAGCTAAG 
CAGATTCAAG ATGAGTTGAA TGAACTTGAG GAGCGGGCTG AAGCTTTGGA TCGGCAGCGG 
ACAAAAAACA TCTCTGCCAT AAGTTATATC AACCAGCGAA ACAGAGAATG GAATATTGTG 
GAGTCTGAGA AGGCTTTAGT GGCAGAGAGT CAGAGCATGA AGCAGCAGCA GATGGATCCC 
TTCACTAGGA GGCAATGCAA GCCAACCATG GTGTCTAATT CCAGGGATCC TGCAGTTCAG 
GCAGCCATTA TTGCTCAGCT AAATGCAAAG TATGGTTCCG GAGCTAGCAA CGATGCATCT 
AAAGACACAG GCTCGGCTCA AAGCAAGGAT AAAGATGGAA ACACCAAGTC AGCCAGTGAC 
CTCTCGGAAG ACCTGTTTAA AGTGCATGAT TTTGATGTCA AGATCGACCT CCAAGTCCCT 
AGTTCAGAAT CAAAATCTCT CGCCATCTCC TCAAAAGCAC CACCAGCAAA GGACGGAGCA 
CCCCGCCGAT CTCTGAATCT GGAGGACTAC AAAAAAAGGA GAGGACTTAT CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_012823707.1
CDS	124..2157
Translation	MVKKRKGRVVIDSDTEDSGSDENLDQELLSLAKRKRSDSEEKEQPISKPAATSDSETSDSDDEWTVTGQSKNKKKGKPGKGGEKKAAMKKQANRAASSASSGKDSSEESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFCDGYGEDFMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKRKEKKEKEKKKKHDEEQEKKKQTQVLEAQLQVTSHNKERRSKRDEKLDKKSQAMEELRAEREKRKNKTAELIARKQPLKTSEVYSDDEEEEEDDKSSEKSNRSSRSSSSSDEDEETVEIPPKSLPVSLPEELNKVRLSRHKLERWCHMPFFAKTVSGCFVRIGIGNHNSKPVYRVAEITGVVETGKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKEAMNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLMKDKAMAEEAGDQDRAKQIQDELNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESQSMKQQQMDPFTRRQCKPTMVSNSRDPAVQAAIIAQLNAKYGSGASNDASKDTGSAQSKDKDGNTKSASDLSEDLFKVHDFDVKIDLQVPSSESKSLAISSKAPPAKDGAPRRSLNLEDYKKRRGLI

Target ORF information:

RefSeq Version	XM_012968253.3
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis RTF1 homolog, Paf1/RNA polymerase II complex component (rtf1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_012968253.3

ORF Insert Sequence:

ATGGTGAAGA AACGGAAAGG CCGGGTGGTC ATAGACTCCG ATACCGAGGA TAGCGGTAGC 
GACGAGAATT TGGATCAGGA GCTTCTGTCT TTGGCCAAGC GCAAGAGGAG TGATTCAGAA 
GAGAAGGAAC AGCCAATAAG CAAGCCGGCA GCAACCTCTG ACTCGGAGAC CTCTGATAGT 
GATGATGAGT GGACAGTCAC AGGACAGTCA AAAAACAAGA AAAAAGGGAA ACCGGGGAAA 
GGAGGGGAGA AGAAGGCAGC TATGAAGAAA CAGGCCAACC GGGCAGCATC TTCTGCCAGC 
TCTGGCAAGG ACAGCTCTGA GGAGAGCTCT GCTCCAGAAG AAGGCGAGGT GTCGGATTCT 
GATAGTAACA GCTCCTCCTC CAGTTCTGAT TCAGATTCTT CATCTGAAGA TGAAGAGTTC 
TGCGATGGCT ATGGGGAGGA CTTCATGGGG GATGAAGAAG ATCGGGCTCG ACTTGAGCAG 
ATGACTGAGA AAGAGAGGGA ACAAGAACTG TTTAATCGGA TAGAAAAGCG GGAAGTGCTC 
AAACGAAGAT TTGAAATAAA GAAGAAGCTA AAAACAGCAA AAAGGAAAGA AAAGAAAGAA 
AAAGAGAAAA AGAAGAAGCA TGATGAAGAA CAGGAGAAAA AGAAGCAAAC ACAGGTCTTG 
GAGGCACAGT TACAGGTAAC TTCACATAAT AAAGAAAGGA GGTCAAAGCG GGATGAAAAG 
TTGGATAAGA AATCTCAAGC AATGGAAGAA TTGCGAGCAG AGAGAGAGAA AAGGAAGAAT 
AAGACTGCAG AGTTGATTGC CAGAAAACAG CCTCTGAAGA CCAGCGAGGT ATATTCTGAC 
GATGAAGAGG AAGAAGAGGA TGATAAGTCT AGTGAAAAAA GCAACCGATC TTCTAGATCA 
TCTTCTTCAT CTGATGAAGA CGAAGAGACT GTTGAGATTC CACCAAAATC TCTGCCTGTA 
TCTTTGCCAG AAGAGCTCAA CAAGGTTCGG TTGTCTCGAC ACAAATTGGA ACGTTGGTGT 
CATATGCCCT TTTTTGCCAA GACTGTCTCA GGCTGTTTTG TGCGGATAGG CATTGGAAAC 
CATAACAGCA AACCTGTATA CAGAGTTGCA GAAATCACTG GTGTGGTGGA GACTGGAAAA 
GTATACCAGT TGGGCGGGAC AAGGACAAAT AAAGGCCTGC AGTTACGGCA TGGCAACGAC 
CAGAGGGTGT TCCGACTGGA GTTCGTCTCT AACCAAGAGT TTACAGAAAG CGAGTTCATG 
AAATGGAAAG AGGCGATGTT TTCTGCTGGA ATGCAGCTTC CCACTCTCGA TGAAATCAAC 
AAGAAGGAAC TATCAATTAA AGAAGCCATG AATTATAAAT TTAATGACCA GGATATTGAG 
GAGATTGTAA AGGAAAAGGA ACGGTTTAGA AAAGCTCCTC CGAATTATGC CATGAAGAAA 
ACTCAGCTTA TGAAGGATAA GGCAATGGCG GAGGAAGCTG GAGATCAAGA CAGAGCTAAG 
CAGATTCAAG ATGAGTTGAA TGAACTTGAG GAGCGGGCTG AAGCTTTGGA TCGGCAGCGG 
ACAAAAAACA TCTCTGCCAT AAGTTATATC AACCAGCGAA ACAGAGAATG GAATATTGTG 
GAGTCTGAGA AGGCTTTAGT GGCAGAGAGT CAGAGCATGA AGCAGCAGCA GATGGATCCC 
TTCACTAGGA GGCAATGCAA GCCAACCATG GTGTCTAATT CCAGGGATCC TGCAGTTCAG 
GCAGCCATTA TTGCTCAGCT AAATGCAAAG TATGGTTCCG GAGCTAGCAA CGATGCATCT 
AAAGACACAG GCTCGGCTCA AAGCAAGGAT AAAGATGGAA ACACCAAGTC AGCCAGTGAC 
CTCTCGGAAG ACCTGTTTAA AGTGCATGAT TTTGATGTCA AGATCGACCT CCAAGTCCCT 
AGTTCAGAAT CAAAATCTCT CGCCATCTCC TCAAAAGCAC CACCAGCAAA GGACGGAGCA 
CCCCGCCGAT CTCTGAATCT GGAGGACTAC AAAAAAAGGA GAGGACTTAT CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P

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rtf1 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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