Gene Symbol | usp13 |
Entrez Gene ID | 100498395 |
Full Name | ubiquitin specific peptidase 13 |
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » usp13 cDNA ORF clone
Gene Symbol | usp13 |
Entrez Gene ID | 100498395 |
Full Name | ubiquitin specific peptidase 13 |
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
XM_002931576.5 | XP_002931622.2 | ubiquitin carboxyl-terminal hydrolase 13 isoform X1 |
XM_012963395.2 | XP_012818849.1 | ubiquitin carboxyl-terminal hydrolase 13 isoform X2 |
XM_002931576.4 | XP_002931622.2 | ubiquitin carboxyl-terminal hydrolase 13 isoform X3 |
XM_012963394.2 | XP_012818848.1 | ubiquitin carboxyl-terminal hydrolase 13 isoform X1 |
NM_001376926.1 | NP_001363855.1 | ubiquitin carboxyl-terminal hydrolase 13 isoform 2 |
NM_001376925.1 | NP_001363854.1 | ubiquitin carboxyl-terminal hydrolase 13 isoform 1 |
Mus musculus (house mouse) | Usp13 | NP_001013042.1 |
Danio rerio (zebrafish) | usp13 | NP_001091856.1 |
Pan troglodytes (chimpanzee) | USP13 | XP_003310172.1 |
USP13 | XP_001107760.1 | |
Bos taurus (cattle) | USP13 | NP_001178195.1 |
Xenopus tropicalis (tropical clawed frog) | usp13 | XP_002931622.2 |
Homo sapiens (human) | USP13 | NP_003931.2 |
Canis lupus familiaris (dog) | USP13 | XP_003434175.2 |
Rattus norvegicus (Norway rat) | Usp13 | NP_001101135.1 |
Gallus gallus (chicken) | USP13 | XP_426842.2 |
The genome of the Western clawed frog Xenopus tropicalis.
Hellsten U, Harland RM, Gilchrist MJ, Hendrix D, Jurka J, Kapitonov V, Ovcharenko I, Putnam NH, Shu S, Taher L, Blitz IL, Blumberg B, Dichmann DS, Dubchak I, Amaya E, Detter JC, Fletcher R, Gerhard DS, Goodstein D, Graves T, Grigoriev IV, Grimwood J, Kawashima T, Lindquist E, Lucas SM, Mead PE, Mitros T, Ogino H, Ohta Y, Poliakov AV, Pollet N, Robert J, Salamov A, Sater AK, Schmutz J, Terry A, Vize PD, Warren WC, Wells D, Wills A, Wilson RK, Zimmerman LB, Zorn AM, Grainger R, Grammer T, Khokha MK, Richardson PM, Rokhsar DS
Science (New York, N.Y.)328(5978)633-6(2010 Apr)
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P
Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following usp13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the usp13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa10229 | |
Clone ID Related Accession (Same CDS sequence) | XM_002931576.5 , XM_002931576.4 | |
Accession Version | XM_002931576.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2535bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ubiquitin carboxyl-terminal hydrolase 13 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030681.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_002931576.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002931622.2 |
CDS | 422..2956 |
Translation |
Target ORF information:
Target ORF information:
|
XM_002931576.4 |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa37203 | |
Clone ID Related Accession (Same CDS sequence) | XM_012963394.2 , NM_001376925.1 | |
Accession Version | XM_012963394.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2550bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ubiquitin carboxyl-terminal hydrolase 13 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030681.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012963394.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012818848.1 |
CDS | 423..2972 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012963394.2 |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa37204 | |
Clone ID Related Accession (Same CDS sequence) | XM_012963395.2 , NM_001376926.1 | |
Accession Version | XM_012963395.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2541bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ubiquitin carboxyl-terminal hydrolase 13 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030681.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012963395.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012818849.1 |
CDS | 424..2964 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012963395.2 |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa37203 | |
Clone ID Related Accession (Same CDS sequence) | XM_012963394.2 , NM_001376925.1 | |
Accession Version | NM_001376925.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2550bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-01 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ubiquitin carboxyl-terminal hydrolase 13 isoform 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AAMC03020352.1 and AAMC03020353.1. On Nov 29, 2019 this sequence version replaced XM_012963394.2. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00861990, SAMN00862012 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001363854.1 |
CDS | 424..2973 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001376925.1 |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa37204 | |
Clone ID Related Accession (Same CDS sequence) | XM_012963395.2 , NM_001376926.1 | |
Accession Version | NM_001376926.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2541bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-01 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ubiquitin carboxyl-terminal hydrolase 13 isoform 2 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AAMC03020352.1 and AAMC03020353.1. On Nov 29, 2019 this sequence version replaced XM_012963395.2. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN00861990, SAMN00862012 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001363855.1 |
CDS | 424..2964 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001376926.1 |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa10229 | |
Clone ID Related Accession (Same CDS sequence) | XM_002931576.5 , XM_002931576.4 | |
Accession Version | XM_002931576.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2535bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | ubiquitin carboxyl-terminal hydrolase 13 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030681.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_002931576.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_002931622.2 |
CDS | 391..2925 |
Translation |
Target ORF information:
Target ORF information:
|
XM_002931576.5 |
1 | ATGGCTGAAG ACCTGGGAGA GCTGCTGGTC CCTTACATGC CCACCATCAG GGTACCCAAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The genome of the Western clawed frog Xenopus tropicalis. |
Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. |