ORF » Species Summary » Xenopus tropicalis » LOC100487479 cDNA ORF clone

LOC100487479 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

The following LOC100487479 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100487479 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa18863 XM_004919555.4
Latest version!		 Xenopus tropicalis tripartite motif containing 27 (trim27), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
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OXa18863 XM_004919555.3 Xenopus tropicalis E3 ubiquitin-protein ligase TRIM39-like (LOC100487479), mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $342.30
$489.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC100487479 ( XM_004919555.3 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_004919612.1 Xenopus tropicalis E3 ubiquitin-protein ligase TRIM39-like (LOC100487479), mRNA.
    Price & Availability↑
    CloneID OXa18863
    Clone ID Related Accession (Same CDS sequence) XM_004919555.4 , XM_004919555.3
    Accession Version XM_004919555.3 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1584bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-09-07
    Organism Xenopus tropicalis(tropical clawed frog)
    Product E3 ubiquitin-protein ligase TRIM39-like
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_016683508.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_004919555.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCAGCTG CTAATGTGGA AGAGGAGGTG ACATGCTGTG TGTGCAGAAA CATTTACAGA 
    GATCCGGTAA CACTTCCGTG TGGCCATAGC GTCTGCATAG CCTGTGTTTG CTTCCTATGG 
    GACTTCGAAG GGTTTGGTGA TGAAGATTGT TATATCTGCC CTAAATGTGA GCAGAGATAC 
    AGCGGGAGTC CAGAGGCAAA GTTAAACCAT GAGCTGTGTA ATTCAGCAAA TCGGTTCCTA 
    CGATCCCACC AGAGGAAGGG CGACACTCGC ATCTTCTGCT GTCAGTGTGA CCCTCCTGTT 
    CCTGCAACTA AATCCTGTGT GCAGTGTGAG GTCTCTCTGT GTGACACCCA CATGGGGGAT 
    CATAGTGACC CAACTCAACA TTCACTTATT GCCCCGACCC ATGACTTTTC AGACAGGAAG 
    TGCTCTGTGC ATCATCAGAT CCTGGAGTAT TACTGCTGGG AGGATTTGGC CTTTATGTGT 
    GAGTCCTGCA GCCTCTCCGG GGGGCACAGG GGCCACAGGG TGCAGCGGCT GGATGAGGCG 
    TCCGAGGCAA AGAAAGGGAA ACTAAAAGAA ATTTTACACA AACTGACCCC AAAGACAATG 
    GAGACAGACC AAAAGATACA GAGTTTAAGT AAGCACAAAA AAATAGTGAA AAAAAGTGCA 
    AAGAATAACG ACATGCAAGT GACTAAGTTG TTTAGGGACA TCAGAGAGCA ACTGGAAAAC 
    CTAGAGGAGA AAATTGTGAC CGAGATCATT GAGCAGAGGA AAAAAGGATG GGAAATGATG 
    TCTGACCTTA TAGATGTACT GCAAAACAAG AAATATTCAT TGGAATGGAA GATCGTGCAA 
    TATGGAAGGT TATGTGCCAG TTCTGATCAT GTGACTGTAC TGAGGGAACA GGAAGCAGAG 
    GCAGAAGCCT TGTGTGGCGT TGAGGAGGAG GACAATGTGG CTGATGGGAA GAAGCTCCCA 
    GTTGTCGGTG ACCTGGATGA GCGGCTGATC TCAGGGAAAC TAAGTGCAGC TATAACCGAT 
    GTTACTAATG TCATACATGC CATAGGGATC TATGGGCGGG AGGCGACTGG GCTGTCACTG 
    GATACAGACA CAGCCTCTAA TAACCTAGCG CTGTCCCATA ATAGGAAAAG TGTGTCCCAC 
    ACACACACAA GGCAGAACCT GCCCCAAACT CCAGGGAGGT TCCAGGTGGC TCAGGCTTTA 
    TGCACCAGGA GCTTTAGCTC AGGGAAACAC TACTGGGAGG TGGAGGGCAG TGAGACTGGG 
    GGCTGGCGTA TTGGGGTGGC CTATCCCAGT ATAGATAGGG AAGGGGATCA ATCGTACATT 
    GGGTTTAATA ACAAGTCCTG GGCTCTGTGT AAGTTCTATA ATAACTACTC AGTGATACAT 
    AATGGGGAAA GGAAGGGTTT GGCTATGCCC CCCTCCTGCC AGAGAATCAG AATATTTCTG 
    GATTATGAGG CCGGATGTCT GTCCTTTTAT GAGCTGAGTT ACCCAATCAG ACACTTACAC 
    ACCTTTACTG CCTCCTTCTC TGAGCCGCTC CAGCCTGTAT TGTGGGTAGC TGAGGGGGGA 
    GGCTGGGTCA GAATGCTTAG CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_004919612.1
    CDS326..1909
    Translation

    Target ORF information:

    RefSeq Version XM_004919555.3
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis E3 ubiquitin-protein ligase TRIM39-like (LOC100487479), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_004919555.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCAGCTG CTAATGTGGA AGAGGAGGTG ACATGCTGTG TGTGCAGAAA CATTTACAGA 
    GATCCGGTAA CACTTCCGTG TGGCCATAGC GTCTGCATAG CCTGTGTTTG CTTCCTATGG 
    GACTTCGAAG GGTTTGGTGA TGAAGATTGT TATATCTGCC CTAAATGTGA GCAGAGATAC 
    AGCGGGAGTC CAGAGGCAAA GTTAAACCAT GAGCTGTGTA ATTCAGCAAA TCGGTTCCTA 
    CGATCCCACC AGAGGAAGGG CGACACTCGC ATCTTCTGCT GTCAGTGTGA CCCTCCTGTT 
    CCTGCAACTA AATCCTGTGT GCAGTGTGAG GTCTCTCTGT GTGACACCCA CATGGGGGAT 
    CATAGTGACC CAACTCAACA TTCACTTATT GCCCCGACCC ATGACTTTTC AGACAGGAAG 
    TGCTCTGTGC ATCATCAGAT CCTGGAGTAT TACTGCTGGG AGGATTTGGC CTTTATGTGT 
    GAGTCCTGCA GCCTCTCCGG GGGGCACAGG GGCCACAGGG TGCAGCGGCT GGATGAGGCG 
    TCCGAGGCAA AGAAAGGGAA ACTAAAAGAA ATTTTACACA AACTGACCCC AAAGACAATG 
    GAGACAGACC AAAAGATACA GAGTTTAAGT AAGCACAAAA AAATAGTGAA AAAAAGTGCA 
    AAGAATAACG ACATGCAAGT GACTAAGTTG TTTAGGGACA TCAGAGAGCA ACTGGAAAAC 
    CTAGAGGAGA AAATTGTGAC CGAGATCATT GAGCAGAGGA AAAAAGGATG GGAAATGATG 
    TCTGACCTTA TAGATGTACT GCAAAACAAG AAATATTCAT TGGAATGGAA GATCGTGCAA 
    TATGGAAGGT TATGTGCCAG TTCTGATCAT GTGACTGTAC TGAGGGAACA GGAAGCAGAG 
    GCAGAAGCCT TGTGTGGCGT TGAGGAGGAG GACAATGTGG CTGATGGGAA GAAGCTCCCA 
    GTTGTCGGTG ACCTGGATGA GCGGCTGATC TCAGGGAAAC TAAGTGCAGC TATAACCGAT 
    GTTACTAATG TCATACATGC CATAGGGATC TATGGGCGGG AGGCGACTGG GCTGTCACTG 
    GATACAGACA CAGCCTCTAA TAACCTAGCG CTGTCCCATA ATAGGAAAAG TGTGTCCCAC 
    ACACACACAA GGCAGAACCT GCCCCAAACT CCAGGGAGGT TCCAGGTGGC TCAGGCTTTA 
    TGCACCAGGA GCTTTAGCTC AGGGAAACAC TACTGGGAGG TGGAGGGCAG TGAGACTGGG 
    GGCTGGCGTA TTGGGGTGGC CTATCCCAGT ATAGATAGGG AAGGGGATCA ATCGTACATT 
    GGGTTTAATA ACAAGTCCTG GGCTCTGTGT AAGTTCTATA ATAACTACTC AGTGATACAT 
    AATGGGGAAA GGAAGGGTTT GGCTATGCCC CCCTCCTGCC AGAGAATCAG AATATTTCTG 
    GATTATGAGG CCGGATGTCT GTCCTTTTAT GAGCTGAGTT ACCCAATCAG ACACTTACAC 
    ACCTTTACTG CCTCCTTCTC TGAGCCGCTC CAGCCTGTAT TGTGGGTAGC TGAGGGGGGA 
    GGCTGGGTCA GAATGCTTAG CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC100487479 ( XM_004919555.4 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_004919612.1 Xenopus tropicalis tripartite motif containing 27 (trim27), mRNA.
    Price & Availability↑
    CloneID OXa18863
    Clone ID Related Accession (Same CDS sequence) XM_004919555.4 , XM_004919555.3
    Accession Version XM_004919555.4 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1584bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-17
    Organism Xenopus tropicalis(tropical clawed frog)
    Product E3 ubiquitin-protein ligase TRIM39
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030682.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_004919555.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCAGCTG CTAATGTGGA AGAGGAGGTG ACATGCTGTG TGTGCAGAAA CATTTACAGA 
    GATCCGGTAA CACTTCCGTG TGGCCATAGC GTCTGCATAG CCTGTGTTTG CTTCCTATGG 
    GACTTCGAAG GGTTTGGTGA TGAAGATTGT TATATCTGCC CTAAATGTGA GCAGAGATAC 
    AGCGGGAGTC CAGAGGCAAA GTTAAACCAT GAGCTGTGTA ATTCAGCAAA TCGGTTCCTA 
    CGATCCCACC AGAGGAAGGG CGACACTCGC ATCTTCTGCT GTCAGTGTGA CCCTCCTGTT 
    CCTGCAACTA AATCCTGTGT GCAGTGTGAG GTCTCTCTGT GTGACACCCA CATGGGGGAT 
    CATAGTGACC CAACTCAACA TTCACTTATT GCCCCGACCC ATGACTTTTC AGACAGGAAG 
    TGCTCTGTGC ATCATCAGAT CCTGGAGTAT TACTGCTGGG AGGATTTGGC CTTTATGTGT 
    GAGTCCTGCA GCCTCTCCGG GGGGCACAGG GGCCACAGGG TGCAGCGGCT GGATGAGGCG 
    TCCGAGGCAA AGAAAGGGAA ACTAAAAGAA ATTTTACACA AACTGACCCC AAAGACAATG 
    GAGACAGACC AAAAGATACA GAGTTTAAGT AAGCACAAAA AAATAGTGAA AAAAAGTGCA 
    AAGAATAACG ACATGCAAGT GACTAAGTTG TTTAGGGACA TCAGAGAGCA ACTGGAAAAC 
    CTAGAGGAGA AAATTGTGAC CGAGATCATT GAGCAGAGGA AAAAAGGATG GGAAATGATG 
    TCTGACCTTA TAGATGTACT GCAAAACAAG AAATATTCAT TGGAATGGAA GATCGTGCAA 
    TATGGAAGGT TATGTGCCAG TTCTGATCAT GTGACTGTAC TGAGGGAACA GGAAGCAGAG 
    GCAGAAGCCT TGTGTGGCGT TGAGGAGGAG GACAATGTGG CTGATGGGAA GAAGCTCCCA 
    GTTGTCGGTG ACCTGGATGA GCGGCTGATC TCAGGGAAAC TAAGTGCAGC TATAACCGAT 
    GTTACTAATG TCATACATGC CATAGGGATC TATGGGCGGG AGGCGACTGG GCTGTCACTG 
    GATACAGACA CAGCCTCTAA TAACCTAGCG CTGTCCCATA ATAGGAAAAG TGTGTCCCAC 
    ACACACACAA GGCAGAACCT GCCCCAAACT CCAGGGAGGT TCCAGGTGGC TCAGGCTTTA 
    TGCACCAGGA GCTTTAGCTC AGGGAAACAC TACTGGGAGG TGGAGGGCAG TGAGACTGGG 
    GGCTGGCGTA TTGGGGTGGC CTATCCCAGT ATAGATAGGG AAGGGGATCA ATCGTACATT 
    GGGTTTAATA ACAAGTCCTG GGCTCTGTGT AAGTTCTATA ATAACTACTC AGTGATACAT 
    AATGGGGAAA GGAAGGGTTT GGCTATGCCC CCCTCCTGCC AGAGAATCAG AATATTTCTG 
    GATTATGAGG CCGGATGTCT GTCCTTTTAT GAGCTGAGTT ACCCAATCAG ACACTTACAC 
    ACCTTTACTG CCTCCTTCTC TGAGCCGCTC CAGCCTGTAT TGTGGGTAGC TGAGGGGGGA 
    GGCTGGGTCA GAATGCTTAG CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_004919612.1
    CDS326..1909
    Translation

    Target ORF information:

    RefSeq Version XM_004919555.4
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis tripartite motif containing 27 (trim27), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_004919555.4

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCAGCTG CTAATGTGGA AGAGGAGGTG ACATGCTGTG TGTGCAGAAA CATTTACAGA 
    GATCCGGTAA CACTTCCGTG TGGCCATAGC GTCTGCATAG CCTGTGTTTG CTTCCTATGG 
    GACTTCGAAG GGTTTGGTGA TGAAGATTGT TATATCTGCC CTAAATGTGA GCAGAGATAC 
    AGCGGGAGTC CAGAGGCAAA GTTAAACCAT GAGCTGTGTA ATTCAGCAAA TCGGTTCCTA 
    CGATCCCACC AGAGGAAGGG CGACACTCGC ATCTTCTGCT GTCAGTGTGA CCCTCCTGTT 
    CCTGCAACTA AATCCTGTGT GCAGTGTGAG GTCTCTCTGT GTGACACCCA CATGGGGGAT 
    CATAGTGACC CAACTCAACA TTCACTTATT GCCCCGACCC ATGACTTTTC AGACAGGAAG 
    TGCTCTGTGC ATCATCAGAT CCTGGAGTAT TACTGCTGGG AGGATTTGGC CTTTATGTGT 
    GAGTCCTGCA GCCTCTCCGG GGGGCACAGG GGCCACAGGG TGCAGCGGCT GGATGAGGCG 
    TCCGAGGCAA AGAAAGGGAA ACTAAAAGAA ATTTTACACA AACTGACCCC AAAGACAATG 
    GAGACAGACC AAAAGATACA GAGTTTAAGT AAGCACAAAA AAATAGTGAA AAAAAGTGCA 
    AAGAATAACG ACATGCAAGT GACTAAGTTG TTTAGGGACA TCAGAGAGCA ACTGGAAAAC 
    CTAGAGGAGA AAATTGTGAC CGAGATCATT GAGCAGAGGA AAAAAGGATG GGAAATGATG 
    TCTGACCTTA TAGATGTACT GCAAAACAAG AAATATTCAT TGGAATGGAA GATCGTGCAA 
    TATGGAAGGT TATGTGCCAG TTCTGATCAT GTGACTGTAC TGAGGGAACA GGAAGCAGAG 
    GCAGAAGCCT TGTGTGGCGT TGAGGAGGAG GACAATGTGG CTGATGGGAA GAAGCTCCCA 
    GTTGTCGGTG ACCTGGATGA GCGGCTGATC TCAGGGAAAC TAAGTGCAGC TATAACCGAT 
    GTTACTAATG TCATACATGC CATAGGGATC TATGGGCGGG AGGCGACTGG GCTGTCACTG 
    GATACAGACA CAGCCTCTAA TAACCTAGCG CTGTCCCATA ATAGGAAAAG TGTGTCCCAC 
    ACACACACAA GGCAGAACCT GCCCCAAACT CCAGGGAGGT TCCAGGTGGC TCAGGCTTTA 
    TGCACCAGGA GCTTTAGCTC AGGGAAACAC TACTGGGAGG TGGAGGGCAG TGAGACTGGG 
    GGCTGGCGTA TTGGGGTGGC CTATCCCAGT ATAGATAGGG AAGGGGATCA ATCGTACATT 
    GGGTTTAATA ACAAGTCCTG GGCTCTGTGT AAGTTCTATA ATAACTACTC AGTGATACAT 
    AATGGGGAAA GGAAGGGTTT GGCTATGCCC CCCTCCTGCC AGAGAATCAG AATATTTCTG 
    GATTATGAGG CCGGATGTCT GTCCTTTTAT GAGCTGAGTT ACCCAATCAG ACACTTACAC 
    ACCTTTACTG CCTCCTTCTC TGAGCCGCTC CAGCCTGTAT TGTGGGTAGC TGAGGGGGGA 
    GGCTGGGTCA GAATGCTTAG CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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