LOC100486342 cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100486342
Entrez Gene ID	100486342
Full Name	beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like
General protein information	Preferred Names beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like Names beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like
Gene Type	protein-coding
Organism	Xenopus tropicalis(tropical clawed frog)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002937891.5	XP_002937937.1	beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3
XM_002937891.4	XP_002937937.1	beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like

Pathways from BioSystems

Homologies

Homo sapiens (human)	GCNT3	NP_004742.1
Bos taurus (cattle)	GCNT3	NP_991378.1
Danio rerio (zebrafish)	gcnt3	XP_002666963.1
Rattus norvegicus (Norway rat)	Gcnt3	NP_775434.1
Caenorhabditis elegans (roundworm)	gly-19	NP_492015.1
Caenorhabditis elegans (roundworm)	gly-18	NP_492014.4
Xenopus tropicalis (tropical clawed frog)	LOC100486342	XP_002937937.1
Canis lupus familiaris (dog)	GCNT3	XP_005638526.1
Mus musculus (house mouse)	Gcnt3	NP_082363.2
Gallus gallus (chicken)	GCNT3	XP_425064.2
Caenorhabditis elegans (roundworm)	gly-1	NP_496345.1
Pan troglodytes (chimpanzee)	GCNT3	XP_510451.2
	GCNT3	XP_001099658.1
Caenorhabditis elegans (roundworm)	gly-16	NP_493135.2
Caenorhabditis elegans (roundworm)	gly-17	NP_493134.2
Caenorhabditis elegans (roundworm)	gly-15	NP_493164.2

Gene Ontology

The following LOC100486342 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100486342 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OXa16243	XM_002937891.4 Latest version!	Xenopus tropicalis beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like (LOC100486342), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
OXa55037	XM_002937891.5 Latest version!	Xenopus tropicalis beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like (LOC100486342), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100486342 ( XM_002937891.4 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_002937937.1 Xenopus tropicalis beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like (LOC100486342), mRNA.

Price & Availability↑

CloneID	OXa16243
Clone ID Related Accession (Same CDS sequence)	XM_002937891.4
Accession Version	XM_002937891.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1329bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-09-07
Organism	Xenopus tropicalis(tropical clawed frog)
Product	beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_002937891.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTTTGC TCGACTGTAA AAGATCCAGG TGCAATCTCC TCCAGAGCGT TTTACTTTTG 
GCTTTGATTG GACTTTCTGG TGTTATGATA ACAAAATTCA TCTCTAATAA ATGTGATATT 
GCGGACATCC AAGGTGAATC AGACAGTTCC AGAAGTCTGC CCTGCAAGGA TCATTTTTAC 
AAACAAATCA GCTTGAGAGC AAATGGCGCA GGTAAGGCAA ATTGCACCAG AATTACTAAG 
GGGGATTTAG AGGCTATTGA TGAAGGATTA AAACTGAATA AAGAGGTGAT AAATCCTGAT 
TTTCATTTTA ATGAAAGCAG TTACATAAAC ATGACTACAG ACTGCAGTTA TTTTAAGAAA 
AACAGAAAAT ATATGCCATT TCCCATGAGC AAAGAAGAGG AGAACTTCCC TATTGCCTAT 
TCTATGGTTA TACATGAAAA GATTGATATG TTCGAAAGGC TACTGAGAGC AATTTATGCC 
CCTCAGAACA TTTACTGTGT TCATGTGGAT GAAAAGTCTC CTGCTGTATT TAAGGAGGCA 
GTGAATGCCA TTACCTCTTG CTTTGATAAT GTATTTATTG CATCCAAGTT AGTCAAAGTG 
GTCTATGCTG CTTGGCCAAG GGTTCAAGCT GACCTAAACT GCATGGAAGA TTTACTGCAG 
AGCAAAGTAC TGTGGAAGTA CCTTCTAAAT ACTTGTGGCA CAGACTTCCC ATTAAAGACT 
AATGCTGAAA TTGTGAGAAC CCTCAAATCA TTAAATGGAA AAAATAGTAT GGAGTCTGAG 
AAACCATCAT CATCAAAAAA GACACGCTGG GAATTTCATT TTGAAGTGGG AGATTCTATA 
TCAAAGACAG CTATTGAGAA ATCCCCACCG CCGATTGACA GTCCAATGTT TACAGGCAAC 
GCGTATATTG TGGTTTGCCG AAATTTCGTT GAACATATTT TTAACAATCC ACAAGCTCTG 
ACCTTGATAG AGTGGGTCAA GGATACATAT AGCCCAGATG AACATTTATG GGCTACTCTT 
AATAGAATGC CAGGAGTACC AGGGTCTTCT CCTTACAGCG ATAAATATGA AAAATCAGAT 
ATGAATGCAG TGGCCAGAAT GGTAAAGTGG GGGTACATGG AAGGGGACAT TGCAAAGGGA 
GCACCTTACC CACCATGCAC AGGTACACAC AGGAGGTCAA TTTGTGTGTA TGGTACTGGG 
GATCTATATT GGTTGCTGGA ACAGCATCAT GTGTTGGCCA ACAAGTTTGA TCCTAAAGTT 
GACAACATTG CTCTTGAATG CCTTGAAGAA TATTTAAGAC ACAAAACTGT TTATGGAAAA 
GGACTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002937937.1
CDS	52..1380
Translation	MALLDCKRSRCNLLQSVLLLALIGLSGVMITKFISNKCDIADIQGESDSSRSLPCKDHFYKQISLRANGAGKANCTRITKGDLEAIDEGLKLNKEVINPDFHFNESSYINMTTDCSYFKKNRKYMPFPMSKEEENFPIAYSMVIHEKIDMFERLLRAIYAPQNIYCVHVDEKSPAVFKEAVNAITSCFDNVFIASKLVKVVYAAWPRVQADLNCMEDLLQSKVLWKYLLNTCGTDFPLKTNAEIVRTLKSLNGKNSMESEKPSSSKKTRWEFHFEVGDSISKTAIEKSPPPIDSPMFTGNAYIVVCRNFVEHIFNNPQALTLIEWVKDTYSPDEHLWATLNRMPGVPGSSPYSDKYEKSDMNAVARMVKWGYMEGDIAKGAPYPPCTGTHRRSICVYGTGDLYWLLEQHHVLANKFDPKVDNIALECLEEYLRHKTVYGKGL

Target ORF information:

RefSeq Version	XM_002937891.4
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like (LOC100486342), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002937891.4

ORF Insert Sequence:

ATGGCTTTGC TCGACTGTAA AAGATCCAGG TGCAATCTCC TCCAGAGCGT TTTACTTTTG 
GCTTTGATTG GACTTTCTGG TGTTATGATA ACAAAATTCA TCTCTAATAA ATGTGATATT 
GCGGACATCC AAGGTGAATC AGACAGTTCC AGAAGTCTGC CCTGCAAGGA TCATTTTTAC 
AAACAAATCA GCTTGAGAGC AAATGGCGCA GGTAAGGCAA ATTGCACCAG AATTACTAAG 
GGGGATTTAG AGGCTATTGA TGAAGGATTA AAACTGAATA AAGAGGTGAT AAATCCTGAT 
TTTCATTTTA ATGAAAGCAG TTACATAAAC ATGACTACAG ACTGCAGTTA TTTTAAGAAA 
AACAGAAAAT ATATGCCATT TCCCATGAGC AAAGAAGAGG AGAACTTCCC TATTGCCTAT 
TCTATGGTTA TACATGAAAA GATTGATATG TTCGAAAGGC TACTGAGAGC AATTTATGCC 
CCTCAGAACA TTTACTGTGT TCATGTGGAT GAAAAGTCTC CTGCTGTATT TAAGGAGGCA 
GTGAATGCCA TTACCTCTTG CTTTGATAAT GTATTTATTG CATCCAAGTT AGTCAAAGTG 
GTCTATGCTG CTTGGCCAAG GGTTCAAGCT GACCTAAACT GCATGGAAGA TTTACTGCAG 
AGCAAAGTAC TGTGGAAGTA CCTTCTAAAT ACTTGTGGCA CAGACTTCCC ATTAAAGACT 
AATGCTGAAA TTGTGAGAAC CCTCAAATCA TTAAATGGAA AAAATAGTAT GGAGTCTGAG 
AAACCATCAT CATCAAAAAA GACACGCTGG GAATTTCATT TTGAAGTGGG AGATTCTATA 
TCAAAGACAG CTATTGAGAA ATCCCCACCG CCGATTGACA GTCCAATGTT TACAGGCAAC 
GCGTATATTG TGGTTTGCCG AAATTTCGTT GAACATATTT TTAACAATCC ACAAGCTCTG 
ACCTTGATAG AGTGGGTCAA GGATACATAT AGCCCAGATG AACATTTATG GGCTACTCTT 
AATAGAATGC CAGGAGTACC AGGGTCTTCT CCTTACAGCG ATAAATATGA AAAATCAGAT 
ATGAATGCAG TGGCCAGAAT GGTAAAGTGG GGGTACATGG AAGGGGACAT TGCAAAGGGA 
GCACCTTACC CACCATGCAC AGGTACACAC AGGAGGTCAA TTTGTGTGTA TGGTACTGGG 
GATCTATATT GGTTGCTGGA ACAGCATCAT GTGTTGGCCA ACAAGTTTGA TCCTAAAGTT 
GACAACATTG CTCTTGAATG CCTTGAAGAA TATTTAAGAC ACAAAACTGT TTATGGAAAA 
GGACTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100486342 ( XM_002937891.5 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> XP_002937937.1 Xenopus tropicalis beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like (LOC100486342), mRNA.

Price & Availability↑

CloneID	OXa55037
Clone ID Related Accession (Same CDS sequence)	XM_002937891.5
Accession Version	XM_002937891.5 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1329bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-17
Organism	Xenopus tropicalis(tropical clawed frog)
Product	beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030679.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_002937891.4. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGCTTTGC TCGACTGTAA AAGATCCAGG TGCAATCTCC TCCAGAGCGT TTTACTTTTG 
GCTTTGATTG GACTTTCTGG TGTTATGATA ACAAAATTCA TCTCTAATAA ATGTGATATT 
GCGGACATCC AAGGTGAATC AGACAGTTCC AGAAGTCTGC CCTGCAAGGA TCATTTTTAC 
AAACAAATCA GCTTGAGAGC AAATGGCGCA GGTAAGGCAA ATTGCACCAG AATTACTAAG 
GGGGATTTAG AGGCTATTGA TGAAGGATTA AAACTGAATA AAGAGGTGAT AAATCCTGAT 
TTTCATTTTA ATGAAAGCAG TTACATAAAC ATGACTACAG ACTGCAGTTA TTTTAAGAAA 
AACAGAAAAT ATATGCCATT TCCCATGAGC AAAGAAGAGG AGAACTTCCC TATTGCCTAT 
TCTATGGTTA TACATGAAAA GATTGATATG TTCGAAAGGC TACTGAGAGC AATTTATGCC 
CCTCAGAACA TTTACTGTGT TCATGTGGAT GAAAAGTCTC CTGCTGTATT TAAGGAGGCA 
GTGAATGCCA TTACCTCTTG CTTTGATAAT GTATTTATTG CATCCAAGTT AGTCAAAGTG 
GTCTATGCTG CTTGGCCAAG GGTTCAAGCT GACCTAAACT GCATGGAAGA TTTACTGCAG 
AGCAAAGTAC TGTGGAAGTA CCTTCTAAAT ACTTGTGGCA CAGACTTCCC ATTAAAGACT 
AATGCTGAAA TTGTGAGAAC CCTCAAATCA TTAAATGGAA AAAATAGTAT GGAGTCTGAG 
AAACCATCAT CATCAAAAAA GACACGCTGG GAATTTCATT TTGAAGTGGG AGATTCTATA 
TCAAAGACAG CTATTGAGAA ATCCCCACCG CCGATTGACA GTCCAATGTT TACAGGCAAC 
GCGTATATTG TGGTTTGCCG AAATTTCGTT GAACATATTT TTAACAATCC ACAAGCTCTG 
ACCTTGATAG AGTGGGTCAA GGATACATAT AGCCCAGATG AACATTTATG GGCAACCCTT 
AATAGAATGC CAGGAGTACC AGGGTCTTCT CCTTACAGCG ATAAATATGA AAAATCAGAT 
ATGAATGCAG TGGCCAGAAT GGTAAAGTGG GGGTACATGG AAGGGGACAT TGCAAAGGGA 
GCACCTTACC CACCATGCAC AGGTACACAC AGGAGGTCAA TTTGTGTGTA TGGTACTGGG 
GATCTATATT GGTTGCTGGA ACAGCATCAT GTGTTGGCCA ACAAGTTTGA TCCTAAAGTT 
GACAACATTG CTCTTGAATG CCTTGAAGAA TATTTAAGAC ACAAAACTGT TTATGGAAAA 
GGTCTTTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002937937.1
CDS	87..1415
Translation	MALLDCKRSRCNLLQSVLLLALIGLSGVMITKFISNKCDIADIQGESDSSRSLPCKDHFYKQISLRANGAGKANCTRITKGDLEAIDEGLKLNKEVINPDFHFNESSYINMTTDCSYFKKNRKYMPFPMSKEEENFPIAYSMVIHEKIDMFERLLRAIYAPQNIYCVHVDEKSPAVFKEAVNAITSCFDNVFIASKLVKVVYAAWPRVQADLNCMEDLLQSKVLWKYLLNTCGTDFPLKTNAEIVRTLKSLNGKNSMESEKPSSSKKTRWEFHFEVGDSISKTAIEKSPPPIDSPMFTGNAYIVVCRNFVEHIFNNPQALTLIEWVKDTYSPDEHLWATLNRMPGVPGSSPYSDKYEKSDMNAVARMVKWGYMEGDIAKGAPYPPCTGTHRRSICVYGTGDLYWLLEQHHVLANKFDPKVDNIALECLEEYLRHKTVYGKGL

Target ORF information:

RefSeq Version	XM_002937891.5
Organism	Xenopus tropicalis(tropical clawed frog)
Definition	Xenopus tropicalis beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like (LOC100486342), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002937891.5

ORF Insert Sequence:

ATGGCTTTGC TCGACTGTAA AAGATCCAGG TGCAATCTCC TCCAGAGCGT TTTACTTTTG 
GCTTTGATTG GACTTTCTGG TGTTATGATA ACAAAATTCA TCTCTAATAA ATGTGATATT 
GCGGACATCC AAGGTGAATC AGACAGTTCC AGAAGTCTGC CCTGCAAGGA TCATTTTTAC 
AAACAAATCA GCTTGAGAGC AAATGGCGCA GGTAAGGCAA ATTGCACCAG AATTACTAAG 
GGGGATTTAG AGGCTATTGA TGAAGGATTA AAACTGAATA AAGAGGTGAT AAATCCTGAT 
TTTCATTTTA ATGAAAGCAG TTACATAAAC ATGACTACAG ACTGCAGTTA TTTTAAGAAA 
AACAGAAAAT ATATGCCATT TCCCATGAGC AAAGAAGAGG AGAACTTCCC TATTGCCTAT 
TCTATGGTTA TACATGAAAA GATTGATATG TTCGAAAGGC TACTGAGAGC AATTTATGCC 
CCTCAGAACA TTTACTGTGT TCATGTGGAT GAAAAGTCTC CTGCTGTATT TAAGGAGGCA 
GTGAATGCCA TTACCTCTTG CTTTGATAAT GTATTTATTG CATCCAAGTT AGTCAAAGTG 
GTCTATGCTG CTTGGCCAAG GGTTCAAGCT GACCTAAACT GCATGGAAGA TTTACTGCAG 
AGCAAAGTAC TGTGGAAGTA CCTTCTAAAT ACTTGTGGCA CAGACTTCCC ATTAAAGACT 
AATGCTGAAA TTGTGAGAAC CCTCAAATCA TTAAATGGAA AAAATAGTAT GGAGTCTGAG 
AAACCATCAT CATCAAAAAA GACACGCTGG GAATTTCATT TTGAAGTGGG AGATTCTATA 
TCAAAGACAG CTATTGAGAA ATCCCCACCG CCGATTGACA GTCCAATGTT TACAGGCAAC 
GCGTATATTG TGGTTTGCCG AAATTTCGTT GAACATATTT TTAACAATCC ACAAGCTCTG 
ACCTTGATAG AGTGGGTCAA GGATACATAT AGCCCAGATG AACATTTATG GGCAACCCTT 
AATAGAATGC CAGGAGTACC AGGGTCTTCT CCTTACAGCG ATAAATATGA AAAATCAGAT 
ATGAATGCAG TGGCCAGAAT GGTAAAGTGG GGGTACATGG AAGGGGACAT TGCAAAGGGA 
GCACCTTACC CACCATGCAC AGGTACACAC AGGAGGTCAA TTTGTGTGTA TGGTACTGGG 
GATCTATATT GGTTGCTGGA ACAGCATCAT GTGTTGGCCA ACAAGTTTGA TCCTAAAGTT 
GACAACATTG CTCTTGAATG CCTTGAAGAA TATTTAAGAC ACAAAACTGT TTATGGAAAA 
GGTCTTTAA