ORF » Species Summary » Xenopus tropicalis » selenof cDNA ORF clone

selenof cDNA ORF clone, Xenopus tropicalis(tropical clawed frog)

  • Gene

  • Clones

  • gRNAs

The following selenof gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the selenof cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OXa25519 NM_001171711.2
Latest version!		 Xenopus tropicalis selenoprotein F (selenof), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $104.30
$149.00
OXa47205 NM_001347035.1
Latest version!		 Xenopus tropicalis selenoprotein F (selenof), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $104.30
$149.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    selenof ( NM_001171711.2 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> NP_001165182.1 Xenopus tropicalis selenoprotein F (selenof), transcript variant 1, mRNA.
    Price & Availability↑
    CloneID OXa25519
    Clone ID Related Accession (Same CDS sequence) NM_001171711.2
    Accession Version NM_001171711.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 462bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-21
    Organism Xenopus tropicalis(tropical clawed frog)
    Product selenoprotein F isoform 1 precursor
    Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BX716410.1, BC158457.1, BQ394929.1, DN068704.1 and CX498590.2. On Nov 13, 2016 this sequence version replaced NM_001171711.1. Transcript Variant: This variant (1) represents the predominant transcript and encodes the longer isoform (1). ##Evidence-Data-START## Transcript exon combination :: BX716410.1, BC158457.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## protein contains selenocysteine :: inferred from conservation ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    ATGGCGGCAG AGAGGATGCT GCTGTGGTTA GTGACTGTGC TACAGGCGCT GTCGTCTTAT 
    GGTGCAGAAC TCTCTTCAGA AGCATGCAGA GATCTTGGCT TCTCTAGCAA TCTTTTGTGC 
    ACTTCTTGTG AATTGCTTGG ACAGTTTGGT CTGAATGAGA TCAACTTATT CTGCAGGCAG 
    TGCTGCCAGG AAGAAGTACA CCTAGAGTCT AAAAAGAGAT ATCCAGGTGC TGTACTTGAA 
    GTCTGTGGAT GAAAATTGGG AAGGTTTCCT CAAGTCCAGG CTTTTGTCAG GAGTGAGAAA 
    CCCAAACTTT TCAAGGGTCT GCAGATCAAG TATGTACGTG GCTCTGACCC TGTCCTAAAG 
    CTTCTGGATG AAAATGGGAA CATATCTGAA GAACTGAGCA TACTGAAATG GAATACAGAT 
    AGTGTGGAGG AATTTTTAAG TGAAAAACTA GATAGATTAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001165182.1
    CDS24..485
    Translation

    Target ORF information:

    RefSeq Version NM_001171711.2
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis selenoprotein F (selenof), transcript variant 1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001171711.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    ATGGCGGCAG AGAGGATGCT GCTGTGGTTA GTGACTGTGC TACAGGCGCT GTCGTCTTAT 
    GGTGCAGAAC TCTCTTCAGA AGCATGCAGA GATCTTGGCT TCTCTAGCAA TCTTTTGTGC 
    ACTTCTTGTG AATTGCTTGG ACAGTTTGGT CTGAATGAGA TCAACTTATT CTGCAGGCAG 
    TGCTGCCAGG AAGAAGTACA CCTAGAGTCT AAAAAGAGAT ATCCAGGTGC TGTACTTGAA 
    GTCTGTGGAT GAAAATTGGG AAGGTTTCCT CAAGTCCAGG CTTTTGTCAG GAGTGAGAAA 
    CCCAAACTTT TCAAGGGTCT GCAGATCAAG TATGTACGTG GCTCTGACCC TGTCCTAAAG 
    CTTCTGGATG AAAATGGGAA CATATCTGAA GAACTGAGCA TACTGAAATG GAATACAGAT 
    AGTGTGGAGG AATTTTTAAG TGAAAAACTA GATAGATTAT AA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    selenof ( NM_001347035.1 ) cDNA ORF clone, Xenopus tropicalis(tropical clawed frog) -> NP_001333964.1 Xenopus tropicalis selenoprotein F (selenof), transcript variant 2, mRNA.
    Price & Availability↑
    CloneID OXa47205
    Clone ID Related Accession (Same CDS sequence) NM_001347035.1
    Accession Version NM_001347035.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 297bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-12-21
    Organism Xenopus tropicalis(tropical clawed frog)
    Product selenoprotein F isoform 2 precursor
    Comment Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BX716410.1, CX322972.2, BC158457.1, BQ394929.1, DN068704.1 and CX498590.2. Transcript Variant: This variant (2) lacks an exon in the 3' coding region, which results in a frameshift compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus compared to isoform 1. ##Evidence-Data-START## Transcript exon combination :: CX322972.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00028291, SAMD00028292 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## protein contains selenocysteine :: inferred from conservation ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. 

    1
    61
    121
    181
    241
    ATGGCGGCAG AGAGGATGCT GCTGTGGTTA GTGACTGTGC TACAGGCGCT GTCGTCTTAT 
    GGTGCAGAAC TCTCTTCAGA AGCATGCAGA GATCTTGGCT TCTCTAGCAA TCTTTTGTGC 
    ACTTCTTGTG AATTGCTTGG ACAGTTTGGT CTGAATGAGA TCAACTTATT CTGCAGGCAG 
    TGCTGCCAGG AAGAAGTACA CCTAGAGTCT AAAAAGAGAT ATCCAGGTGC TGTACTTGAA 
    GTCTGTGGAT GAAAATTGGG AAGGTTTCCT CAAGTCCAGG TATGTACGTG GCTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001333964.1
    CDS24..320
    Translation

    Target ORF information:

    RefSeq Version NM_001347035.1
    Organism Xenopus tropicalis(tropical clawed frog)
    Definition Xenopus tropicalis selenoprotein F (selenof), transcript variant 2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001347035.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    ATGGCGGCAG AGAGGATGCT GCTGTGGTTA GTGACTGTGC TACAGGCGCT GTCGTCTTAT 
    GGTGCAGAAC TCTCTTCAGA AGCATGCAGA GATCTTGGCT TCTCTAGCAA TCTTTTGTGC 
    ACTTCTTGTG AATTGCTTGG ACAGTTTGGT CTGAATGAGA TCAACTTATT CTGCAGGCAG 
    TGCTGCCAGG AAGAAGTACA CCTAGAGTCT AAAAAGAGAT ATCCAGGTGC TGTACTTGAA 
    GTCTGTGGAT GAAAATTGGG AAGGTTTCCT CAAGTCCAGG TATGTACGTG GCTCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Selenoprotein Gene Nomenclature.
    The Journal of biological chemistry291(46)24036-24040(2016 Nov)
    Gladyshev VN,Arn?r ES,Berry MJ,Brigelius-Floh? R,Bruford EA,Burk RF,Carlson BA,Castellano S,Chavatte L,Conrad M,Copeland PR,Diamond AM,Driscoll DM,Ferreiro A,Floh? L,Green FR,Guig? R,Handy DE,Hatfield DL,Hesketh J,Hoffmann PR,Holmgren A,Hondal RJ,Howard MT,Huang K,Kim HY,Kim IY,K?hrle J,Krol A,Kryukov GV,Lee BJ,Lee BC,Lei XG,Liu Q,Lescure A,Lobanov AV,Loscalzo J,Maiorino M,Mariotti M,Sandeep Prabhu K,Rayman MP,Rozovsky S,Salinas G,Schmidt EE,Schomburg L,Schweizer U,Simonovi? M,Sunde RA,Tsuji PA,Tweedie S,Ursini F,Whanger PD,Zhang Y


    Composition and evolution of the vertebrate and mammalian selenoproteomes.
    PloS one7(3)e33066(2012)
    Mariotti M,Ridge PG,Zhang Y,Lobanov AV,Pringle TH,Guigo R,Hatfield DL,Gladyshev VN


    Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative.
    Developmental dynamics : an official publication of the American Association of Anatomists225(4)384-91(2002 Dec)
    Klein SL,Strausberg RL,Wagner L,Pontius J,Clifton SW,Richardson P


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