Gene Symbol | S100A6 |
Entrez Gene ID | 733608 |
Full Name | S100 calcium binding protein A6 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
ORF » Species Summary » Sus scrofa » S100A6 cDNA ORF clone
Gene Symbol | S100A6 |
Entrez Gene ID | 733608 |
Full Name | S100 calcium binding protein A6 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
mRNA | Protein | Name |
---|---|---|
XM_021088753.1 | XP_020944412.1 | protein S100-A6 isoform X1 |
NM_001044557.1 | NP_001038022.1 | protein S100-A6 |
XM_021088752.1 | XP_020944411.1 | protein S100-A6 isoform X1 |
Molecular characterization of the porcine S100A6 gene and analysis of its expression in pigs infected with highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV).
Zhou X, Wang P, Michal JJ, Wang Y, Zhao J, Jiang Z, Liu B
Journal of applied genetics56(3)355-63(2015 Aug)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
Abundantly expressed genes in pig adipose tissue: an expressed sequence tag approach.
Chen CH, Lin EC, Cheng WT, Sun HS, Mersmann HJ, Ding ST
Journal of animal science84(10)2673-83(2006 Oct)
Comparative analysis of protein coding sequences from human, mouse and the domesticated pig.
J?rgensen FG, Hobolth A, Hornsh?j H, Bendixen C, Fredholm M, Schierup MH
BMC biology32(2005 Jan)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
S100A6 is upregulated during PRRSV infection; there is a putative NF-kappaB binding site in the core promoter region
Title: Molecular characterization of the porcine S100A6 gene and analysis of its expression in pigs infected with highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV).
The following S100A6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the S100A6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe00749 | |
Clone ID Related Accession (Same CDS sequence) | NM_001044557.1 | |
Accession Version | NM_001044557.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 273bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-16 | |
Organism | Sus scrofa(pig) | |
Product | protein S100-A6 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ372082.1. ##Evidence-Data-START## Transcript exon combination :: DQ372082.1 [ECO:0000332] ##Evidence-Data-END## |
1 | ATGGCATGCC CTCTGGATCA GGCTATTGGC CTCCTGGTGG CCATCTTCCA CAAGTACTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001038022.1 |
CDS | 65..337 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001044557.1 |
1 | ATGGCATGCC CTCTGGATCA GGCTATTGGC CTCCTGGTGG CCATCTTCCA CAAGTACTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe247269 | |
Clone ID Related Accession (Same CDS sequence) | XM_021088753.1 , XM_021088752.1 | |
Accession Version | XM_021088753.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 273bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | protein S100-A6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATGCC CTCTGGATCA GGCTATTGGC CTCCTGGTGG CCATCTTCCA CAAGTACTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944412.1 |
CDS | 146..418 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021088753.1 |
1 | ATGGCATGCC CTCTGGATCA GGCTATTGGC CTCCTGGTGG CCATCTTCCA CAAGTACTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe247269 | |
Clone ID Related Accession (Same CDS sequence) | XM_021088753.1 , XM_021088752.1 | |
Accession Version | XM_021088752.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 273bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | protein S100-A6 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010446.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCATGCC CTCTGGATCA GGCTATTGGC CTCCTGGTGG CCATCTTCCA CAAGTACTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020944411.1 |
CDS | 160..432 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021088752.1 |
1 | ATGGCATGCC CTCTGGATCA GGCTATTGGC CTCCTGGTGG CCATCTTCCA CAAGTACTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Molecular characterization of the porcine S100A6 gene and analysis of its expression in pigs infected with highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV). |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
Abundantly expressed genes in pig adipose tissue: an expressed sequence tag approach. |
Comparative analysis of protein coding sequences from human, mouse and the domesticated pig. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |