Gene Symbol | CYP2E1 |
Entrez Gene ID | 403216 |
Full Name | cytochrome P450, family 2, subfamily E, polypeptide 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
ORF » Species Summary » Sus scrofa » CYP2E1 cDNA ORF clone
Gene Symbol | CYP2E1 |
Entrez Gene ID | 403216 |
Full Name | cytochrome P450, family 2, subfamily E, polypeptide 1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_005657509.2 | XP_005657566.1 | cytochrome P450 2E1 isoform X1 |
XM_005657509.3 | XP_005657566.1 | cytochrome P450 2E1 isoform X1 |
NM_214421.1 | NP_999586.1 | cytochrome P450 2E1 |
Analysis of the genetics of boar taint reveals both single SNPs and regional effects.
Rowe SJ, Karaca?ren B, de Koning DJ, Lukic B, Hastings-Clark N, Velander I, Haley CS, Archibald AL
BMC genomics15424(2014 Jun)
CYP2E1 and its relation with boar taint in Belgian pig breeds.
Schroyen M, Janssens S, Stinckens A, Brebels M, Bertolini F, Lamberigts C, Buys N
Communications in agricultural and applied biological sciences77(1)237-41(2012)
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.
Uenishi H, Eguchi-Ogawa T, Shinkai H, Okumura N, Suzuki K, Toki D, Hamasima N, Awata T
Nucleic acids research35(Database issue)D650-3(2007 Jan)
Functional polymorphism in porcine CYP2E1 gene: Its association with skatole levels.
Lin Z, Lou Y, Squires EJ
The Journal of steroid biochemistry and molecular biology99(4-5)231-7(2006 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
A highly significant association was found between variation in skatole levels and SNPs within the CYP2E1 gene on chromosome 14.
Title: Analysis of the genetics of boar taint reveals both single SNPs and regional effects.
The relationship between a single nucleotide polymorphism of CYP2E1 and boar taint in pork from Belgian swine is reported.
Title: CYP2E1 and its relation with boar taint in Belgian pig breeds.
the G --> A substitute might be at least partially responsible for a high level of skatole in pigs
Title: Functional polymorphism in porcine CYP2E1 gene: Its association with skatole levels.
The following CYP2E1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CYP2E1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe29544 | |
Clone ID Related Accession (Same CDS sequence) | NM_214421.1 | |
Accession Version | NM_214421.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1488bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-19 | |
Organism | Sus scrofa(pig) | |
Product | cytochrome P450 2E1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB000885.1. ##Evidence-Data-START## Transcript exon combination :: AB000885.1, AK232506.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1969400, SAMEA1969720 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGACTGCCC TGGGCATCAC GGTGGCCCTG CTGGTGTGGT TGGTCACCCT GCTGCTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_999586.1 |
CDS | 13..1500 |
Translation |
Target ORF information:
Target ORF information:
|
NM_214421.1 |
1 | ATGACTGCCC TGGGCATCAC GGTGGCCCTG CTGGTGTGGT TGGTCACCCT GCTGCTCATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe23049 | |
Clone ID Related Accession (Same CDS sequence) | XM_005657509.2 , XM_005657509.3 | |
Accession Version | XM_005657509.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1218bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-10 | |
Organism | Sus scrofa(Pig) | |
Product | cytochrome P450 2E1 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003536326.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005657509.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCCTCT TCAGTGCCCC CACACCGCTC AGTGGTCGTC CTGTCCATCC ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005657566.1 |
CDS | 461..1678 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005657509.2 |
1 | ATGGGCCTCT TCAGTGCCCC CACACCGCTC AGTGGTCGTC CTGTCCATCC ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe23049 | |
Clone ID Related Accession (Same CDS sequence) | XM_005657509.2 , XM_005657509.3 | |
Accession Version | XM_005657509.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1218bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-05-12 | |
Organism | Sus scrofa(pig) | |
Product | cytochrome P450 2E1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010456.5) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 13, 2017 this sequence version replaced XM_005657509.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCCTCT TCAGTGCCCC CACACCGCTC AGTGGTCGTC CTGTCCATCC ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005657566.1 |
CDS | 451..1668 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005657509.3 |
1 | ATGGGCCTCT TCAGTGCCCC CACACCGCTC AGTGGTCGTC CTGTCCATCC ACTGGCTCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Analysis of the genetics of boar taint reveals both single SNPs and regional effects. |
CYP2E1 and its relation with boar taint in Belgian pig breeds. |
PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. |
Functional polymorphism in porcine CYP2E1 gene: Its association with skatole levels. |